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44 protocols using docosahexaenoic acid

1

Preparation of α-Syn Oligomers Modified by DHA

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α-Syn oligomers modified by DHA (SynO-DHA) were prepared following published protocol [55 (link)]. Briefly, purified and relyophilized α-Syn protein was dissolved in 1× PBS at a concentration of 0.7 μg/μl. Cis-4,7,10,13,16,19-Docosahexaenoic acid (Sigma, 53171) was added to the α-Syn solution at a molar ratio of 1:50 (protein:DHA) and incubated at 37 °C for 48 h at 500 RPM. This fraction was further filtered by using 3 kDa filter unit (Millipore) to remove unbound free DHA molecules.
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2

Fatty Acids and Cell Viability Assay

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α-Linolenic acid (ALA), docosahexaenoic acid (DHA), eicosapentaenoic acid (EPA), linoleic acid (LA), arachidonic acid (AA), γ-linolenic acid (GLA), 3-(4,5-dimethylthiazolyl-2)-2,5-diphenyltetrazolium bromide (MTT), and 5-FU were purchased from Sigma (St. Louis, MO, USA). The human gastric cell lines MGC and SGC were kindly provided by Prof. P. Wensheng (Zhejiang University, China). RPMI medium 1640 was obtained from GIBCO (Grand Island, NY, USA). All other chemicals were of extra-pure grade or analytical grade.
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3

Stimulation of Immune Cells

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LPS E. coli 0111:B4 was from Invivogen (Toulouse, France), docosahexaenoic acid, oleic acid, and palmitic acid were purchased from Sigma-Aldrich Company Ltd. (Dorset, UK), and Vitamin D3 was from DSM Nutritional products (Basel, Switzerland).
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4

Fatty Acids and Cell Signaling Assays

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Vanillylamine, eicosapentaenoic acid (EPA), docosahexaenoic acid (DHA), triethylamine and 2-methyl-2-butanol were purchased from Sigma-Aldrich (Schnelldorf, Germany). Novozym®435 was from Novozymes (Bagsværd, Denmark). n-Hexane, acetone and methanol (analytical grade) were purchased from Carlo Erba Reagenti (Milan, Italy). Roswell Park Memorial Institute (RPMI)-1640, HEPES (4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid), l-glutamine, sodium pyruvate, β-mercaptoethanol, and glucose were acquired from Thermofisher Scientific (Waltham, MA, USA). Dulbecco’s modified Eagle’s medium (DMEM), fetal bovine serum, streptomycin and penicillin were purchased from Lonza (Verviers, Belgium). LPS (E. coli O111:B4) was purchased from Sigma-Aldrich (Schnelldorf, Germany). Capsaicin, Griess reagents and nitrite standard were obtained from Cayman Chemical (Ann Arbor, MI, USA). The ELISA kit for determination of insulin was from Calbiotech Inc. (Spring Valley, CA, USA). The Ca2+ quantification kit was from Diagnosticum Rt (Budapest, Hungary). ATP was assayed with a bioluminescence kit from Thermofisher Scientific (Waltham, MA, USA). The ELISA kits for determination of MCP-1, and CCL20 were purchased from R&D Systems (Abingdon, UK).
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5

Neural Differentiation of CD117+ TSCs

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Neural differentiation assay was performed as previously described [36 (link)] with modifications. CD117+ TSCs were cultured in differentiation conditions using DMEM/F12 medium supplemented with 10 ng/ml bFGF and B27 (1:50) for the next 2 days. To promote photoreceptor differentiation, cells were cultured in the differentiation medium plus N-2 supplement (1:100), 50 nM docosahexaenoic acid (Sigma), 2 μM retinoic acid (Sigma), 10 μM γ-secretase inhibitor (Sigma) for 2 days, and then changed to medium containing DMEM/F12 with B27 (1:50), 10 ng/ml nerve growth factor, 10 ng/ml insulin-like growth factor 1, and 10 ng/ml brain-derived neurotrophic factor (Sigma) for another 4–6 days. Cells were harvested for assessments of immunofluorescence staining (see “Immunocytochemistry”), flow cytometry, and qRT-PCR.
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6

Recombinant HBsAg Vaccine Formulation

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Recombinant HBsAg, 20 mcg/mL concentration adsorbed on 0.5 mg as aluminum hydroxide. Docosahexaenoic acid was purchased from Sigma, St. Louis, MO, USA. Syringe PVDF Filter Unit (0.2 µm) was purchased from Merck, Darmstadt, Germany. The solvents used in this study were products of Scharlau, Barcelona, Spain.
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7

Fatty Acid Analysis Protocol

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Oleic acid (18∶1, n-9; OA), linOleic acid (18∶2, n-6; LA), α-linolenic acid (18∶3, n-3; LNA), arachidonic acid (20∶4, n-6; AA), eicosapentenoic acid (20∶5, n-3; EPA), docosahexaenoic acid (22∶6, n-3; DHA), bovine serum albumin fraction V (BSA, fatty acid free), and 5-aza-2′-deoxy-cytidine (5-aza-dC) were from Sigma.
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8

Inflammation Modulation by Omega-3 Lipids

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Purified eicosapentaenoic acid and docosahexaenoic acid, palmitic acid, and oleic acid were obtained from Sigma Aldrich. Epanova® (omega-3-carboxylic acids [OM-3 CA]) was supplied by AstraZeneca. Over-the-counter omega-3-triglyceride supplements (Nordic Naturals) were purchased from Amazon. Safflower oil was purchased from a commercial grocer. Colchicine, indomethacin, and Ac-YVAD-cmk (YVAD) were purchased from Sigma Chemical. MSU, cholesterol, and calcium pyrophosphate crystals were made according to established protocols31 (link),32 (link). Crystals were tested and found to be free of endotoxins using PYROGENT™–5000 Kinetic Turbidimetric Limulus Amebocyte Lysate assays (Lonza). Cell-culture supernatant and pouch exudates were analysed for IL-1β content with electrochemiluminescence enzyme-linked immunosorbent assay (ELISA) plates (Mesoscale). Prostaglandin E2 (PGE2) content was analysed using a competitive enzyme immunoassay (R&D Systems).
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9

Fatty Acids Modulate Male Production in Daphnids

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Male production assays (16 days long) [28 (link), 29 (link)] were conducted to determine the influence of specific fatty acids (palmitic acid, 99% purity, CAS Number 506-32-1, docosahexaenoic acid, ≥98% purity, CAS Number 6217-54-5, linoleic acid, >99% purity, CAS Number 60-33-3, all purchased from Sigma-Aldrich) in repressing male production induced by pyriproxyfen. Male production was induced by exposing the daphnids to 155 or 310 pM pyriproxyfen (50 or 100 ng/L) (>99% purity; FLUKA, Buchs, Switzerland).
Ten-day old female daphnids (n = 10) were exposed to fatty acids alone or in combination with pyriproxyfen while housed as described in the chronic toxicity tests. All daphnids (controls and treated groups) were exposed to 0.004% ethanol during the assays. To provide increased control over fatty acid exposure levels, daphnids were not provided fish food. Instead, daphnids were either fed the normal quantity of P. subcapitata (6 x 106 cells/adult daphnid) or half the normal quantity (3 x 106 cells/adult daphnid). Adult survival, the total number of neonates, the number of female neonates, and the number of male neonates produced from broods 2–5 was measured. Reproduction was determined only in neonates from broods 2–5, as fatty acid and pyriproxyfen exposure may occur after developmental sex determination in brood 1 [6 (link), 29 (link)].
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10

Fatty Acid Standards for Lipid Analysis

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HPLC-grade methanol, ethanol, and acetonitrile were supplied by Fisher Scientific (Pittsburg, PA, USA). The ultrapure water was purified by a Milli-Q system (Millipore, USA). Palmitoleic acid (C16:1), heptadecenoic acid (C17:1), linolenic acid (C18:3), linoleic acid (C18:2), oleic acid (C18:1), arachidonic acid (C20:4), heneicosanoic acid (C21:0), docosahexaenoic acid (C22:6), and ammonium acetate (all with purity of > 99%, except C22:6, purity of > 98%) were purchased from Sigma-Aldrich Chemicals (St. Louis, MO, USA).
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