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Monobromobimane

Manufactured by Merck Group
Sourced in United States

Monobromobimane is a fluorescent labeling reagent used in various analytical applications. It is a small, water-soluble molecule that covalently binds to sulfhydryl groups, enabling the detection and quantification of thiol-containing compounds.

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13 protocols using monobromobimane

1

Mitochondrial Respiration Assay

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Cyclosporin A (CsA), rotenone, rhodamine 123 (Rh123), dithiothreitol (DTT), monobromobimane+ (MBM+), hematoporphrin (HP), oligomycin, valinomycin and MOPS were purchased from Sigma (St. Louis, MO). All other reagents were of analytical reagent grade, and all solutions were prepared with asepsis double-distilled water.
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2

Cultivation and Stress Exposures of Bacterial Strains

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Bacterial strains, plasmids and primers used in this study are listed in Supplementary Tables S1, S2, S3. For cloning and genetic manipulation, Escherichia coli was cultivated in LB medium. For stress experiments, S. aureus COL wild type and mutant strains were cultivated in LB, RPMI, or Belitsky minimal medium and exposed to the different compounds during the exponential growth as described previously (Loi et al., 2017 (link), 2018b (link)). NaOCl, methylglyoxal, diamide, methylhydroquinone, DTT, cumene hydroperoxide (80% w/v), H2O2 (35% w/v), and monobromobimane were purchased from Sigma Aldrich.
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3

Bimane Fluorescence of β2AR in HDL

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The minimal cysteine β2AR (Yao et al., 2009 (link)) was used in bimane fluorescence experiments. For bimane labeling at cysteine-265 of the β2AR, threefold molar excess of monobromobimane (Sigma-Aldrich) was used, as previously described (Yao et al., 2009 (link)), and HDL reconstitution of the β2AR-bimane was carried out, as described above. Bimane-labeled β2AR-HDLs at 250 nM were incubated in black, solid-bottom 96-well microplates with the vehicle (DMSO) or 10 μM ISO, either alone or together with 1 μM Nb80 or 20 μM Cmpd-6 for 30 minutes at room temperature. All of the components were diluted in buffer comprised of 20 mM HEPES, pH 7.4, and 100 mM NaCl. A CLARIOstar plate reader (BMG Labtech) was used to collect fluorescence emission spectra using the top-read mode with excitation at 370 nm (16-nm bandpass) and emission scanning from 400 to 600 nm (10 nm bandpass) in 1-nm increments.
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4

Quantifying Cardiac and Plasma H2S Levels

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H2S concentrations in the plasma and hearts were measured as previously described with some modifications (Tan et al., 2017 ). First, snap-frozen cardiac tissue was homogenized and centrifuged (12,000 rpm, 20min, 4°C). The protein content in supernatants was measured by using the BCA reagent. Plasma was thawed and mixed before assay. Thirty microliter of samples (plasma or supernatant) was spiked with 80μL monobromobimane (Sigma–Aldrich) and 10 μL of 0.1% ammonia. After being agitated for 60 min at room temperature, the reaction was stopped by adding 10 μL of 20% formic acid. Then, the mixture was subjected to centrifugation at 15,000rpm for 10min, clear supernatants were collected as samples. H2S levels were quantified against a standard curve generated by Na2S (0–40 μmol/L). The plasma H2S levels were expressed as μmol/L, and the heart H2S levels were divided by the protein concentrations, which were expressed as μmol/g of protein.
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5

Inhibition of Hsp90 and Proteasome in Cancer Cells

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Y‐632 was synthesized at the Shanghai Institute of Materia Medica, Chinese Academy of Sciences (Shanghai, China). Imatinib mesylate was obtained from Selleck Chemicals (Houston, TX, USA). Geldanamycin was obtained from Sangon Biotech (Shanghai, China). MG132, proteasome inhibitor I (PS341), chloroquine, MDL28170, monobromobimane, SRB, MTT, and antibodies against β‐tubulin and insulin‐like growth factor 1 receptor were purchased from Sigma‐Aldrich (St. Louis, MO, USA). Antibodies against human epidermal growth factor receptor‐2, GAPDH, EGFR, c‐Met, Akt, phospho‐Akt (Ser473), Cdk4, Cdk6, p85, poly‐(ADP‐ribose) polymerase, caspase 8, caspase 9, Hop, Cdc37, Erk1/2, and phospho‐Erk1/2 (Thr202/Tyr204) were purchased from Cell Signaling Technology (Beverly, MA, USA). Antibodies against β‐actin, Raf‐1, p23, and caspase 3 were from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Antibodies against Hsp90 and Bcr‐Abl were from Abcam (Cambridge, UK). Anti‐Hsp70 antibody was from Enzo Life Sciences (Farmingdale, NY, USA). Antiphosphotyrosine antibody (clone 4G10) was obtained from Millipore (Billerica, MA, USA).
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6

Glutathione Extraction and Quantification

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Thiols were extracted from 30mg of plant tissue in the presence of dithiothreitol (DTT; for total glutathione) or N-ethylmaleimide (NEM; for oxidized glutathione) and derivatized with monobromobimane (Sigma) as described previously (Fey et al., 2005 (link)). Glutathione was measured by reverse-phase high-performance liquid chromatography (HPLC) according to Liedschulte et al. (2010) (link). GSH was determined by subtracting GSSG from total glutathione.
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7

Quantitative H2S Assay for Tissue Samples

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H2S assay was based on a previously published method adapted here for tissue lysates [42 (link)]. First, approximately ~10–20 mg of the tissue samples were disrupted by a dismembrator. Alkylation/lysis was carried out by the addition of 500 µL PBS set to pH 8.0 containing 1 mM monobromobimane (Sigma Aldrich, St. Louis, MO, USA) in a light-protected environment. After a short sonication on ice the solutions were incubated for one hour at 37 °C in the dark. The reaction was stopped by the addition of 50 µL 50% TCA followed by centrifugation at 12,000× g 4 °C for 10 min to remove precipitated proteins. Supernatants were removed and transferred into HPLC vials for measurement, and the remaining pellets were redissolved in 300 µL 4% SDS/0.1 M NaOH for BCA protein assay. Bimane labeled species from the supernatants using 3 µL injection volumes were separated on a Phenomenex Luna C18(2) 250 × 2.0 mm × 3μm column on a Thermo Ultimate 3000 UHPLC system (Thermo Fisher, Waltham, MA USA). A linear gradient elution using solvents 0.1% TFA/H2O (A) and 0.1% TFA/ACN (B) was carried out as described in Table 1. The fluorescent detector was set to excite at 390 nm and detect emission at 475 nm. Quantitation was conducted by establishing a calibration curve by derivatizing standardized H2S solutions.
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8

Quantifying Redox-Sensitive Protein Modifications

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Monobromobimane (MBB), Tris (2-carboxyethyl)phosphine hydrochloride (TCEP), sulfosalicylic acid (SSA), 1-fluoro-2,4-dinitrobenzene (DNFB), TPP® tissue culture dishes, NU6027, penicillin/streptomycin, and t-BOOH were purchased from Sigma (St. Louis, MO). Fetal bovine serum, Dulbecco’s modified Eagle’s medium (DMEM) (standard liquid media) were from Invitrogen (Rockville, MD). β-cyano-L-alanine and diallyl trisulfide were purchased from the Cayman Chemical Company (Ann Arbor, MI). Antibodies used were anti-ATR-pS435 (Cell Signaling Technology Inc, Danvers, MA, catalog number 2853s), anti-total-ATR (Invitrogen, Waltham, MA USA, catalog number PA1–450), anti-CHK1-pS345 (Invitrogen, catalog number PA5–34625), anti-total-CHK1(Abcam, Cambridge, MA, catalog number ab47574), anti-3-MST (Santa Cruz Biotechnology, Santa Cruz, CA, catalog number sc-135993), anti-CSE (Santa Cruz Biotechnology, catalog number sc-101924), anti-CBS (Santa Cruz Biotechnology, catalog number sc-67154), and anti-Visfatin (Nampt, Bethyl Laboratories, Montgomery TX, catalog number A300–779A), rabbit anti-GADPH (Sigma, catalog number G9545), and anti-beta-actin (abcam, catalog number ab8227). Secondary antibodies were goat anti-rabbit IgG (catalog numbers ab6721 & ab2040, Abcam), goat anti-mouse IgG (catalog number ab205719, Abcam), and goat anti-mouse IgG (catalog number sc358920, Santa Cruz).
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9

Synthesis and Purification of CysSSH Donor

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The oxidized CysSSH donor was chemically synthesized as described previously (12 (link)). Briefly, 10 mM cysteine hydrochloride was reacted with 10 mM Na2S or Na34SH in 50 ml of 10 mM NaOH solution in the presence of 5% I2 at room temperature. CysS-S2-SCys and CysS-34S2-SCys were purified by high pressure (or high performance) liquid chromatography. Monobromobimane, β-Cyano-L-alanine and Deferoxamine were purchased from Sigma. Predesigned siRNAs against CBS and CTH (siRNA for CBS: s63475, siRNA for CTH: CTHHSS102445) were purchased from Invitrogen and Ambion, respectively. Control siRNA was purchased from Invitrogen. Methylsulfonyl benzothiazole (MSBT) and biotinylated α-cyano ester (CN-biotin) were synthesized as described previously (12 (link)). DAPI solution and 3′,6′-dil(O-thiosalicyl) fluorescein (SSP4) were purchased from Dojindo, Japan. Hexadecyltrimethylammonium Bromide (CTAB) was purchased from Tokyo Chemical Industry, Japan.
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10

Synthesis and Analysis of Sulfur Compounds

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3-aminophthalhydrazide (luminol), 1-(p-hydroxyphenyl)imidazole (HPI), disodium sulfide (Na2S), erastin, RSL3, cumene hydroperoxide (CHP), liproxstatin-1, 7-(diethylamino)coumarin-3-carbohydrazide (CHH), 4-hydroxytamoxifen (Tam), monobromobimane (MBB), cysteine (Cys), 3-mercaptopyruvate (3MP), cytochrome c (cyt c), glutathione reductase (GR), 2,2′-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid) (ABTS), S-nitrosoglutathione (GSNO), ferrocene, 4-hydroxy-2,2,6,6-tetramethylpiperidin-1-oxyl (TEMPOL) and isopropyl β-d-1-thiogalactopyranoside (IPTG) were obtained from Sigma-Aldrich. BODIPY C11, diallyl tetrasulfide (DATS) and Amplex Red were obtained from Thermo Fisher Scientific. DEPMPO was obtained from Enzo. H2O2 was obtained from Roth. GSH and 5-aminolevulinic acid hydrochloride were obtained from Merck. Sodium disulfide (Na2S2), sodium tetrasulfide (Na2S4) and 3′,6′-di(O-thiosalicyl)fluorescein (SSP4) were obtained from Dojindo. The synthesis of GSSSG, GS34SSG and GSSSSG was performed as described previously43 . CSSSC was synthesized as described below.
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