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5 protocols using lactose

1

Quantitative Analysis of GOS Production

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The production of GOSs was measured using 5% (wt/vol) lactose as a substrate in the assay buffer (20 mM sodium phosphate buffer, pH 7.0, containing 150 mM NaCl) at 25 °C. The reactions were initiated by mixing 125 μL of substrate solution containing 20% (wt/vol) lactose and 375 μL of protein solution containing 0.4 μM BgaD-D and/or an appropriate concentration of monobody (133–266 μM). Samples were withdrawn periodically and boiled for 10 min to terminate the reaction. The amounts of monosaccharides, disaccharides and GOSs were determined using a CK04S column (Mitsubishi Chemical) on an HPLC (LC-30AD, Shimadzu) equipped with an evaporative light scattering detector (ELSD-LTII, Shimadzu). The assay samples were eluted from the column using H2O at a flow rate of 0.4 mL/min at 80 °C. For separation and determination of lactose and other disaccharides (DP2), an Asahipak NH2P-40 3E column (Shodex) was used with a gradient of H2O (solvent A) and acetonitrile (solvent B) at a flow rate of 0.3 mL/min at 30 °C. Sugar concentrations were determined from peak areas. Glucose, galactose, lactose and 4′-galactosyllactose purchased from Wako Chemicals, and tetrasaccharides and larger oligosaccharides prepared as described above, were used as reference compounds for producing standard curves for these assays. Experiments were performed in triplicate.
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2

Characterization of Novel Lactic Acid Bacteria

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Four randomly selected strains and E. gallinarum JCM8728Twere subjected to Gram staining, and their cell shapes and formation were observed under
an oil microscope. Meanwhile, the biochemical characteristics of these strains were
determined using the Rapid ID 32 Strep system (bioMérieux, Lyon, France). In addition, the
abilities of these strains to degrade 6′-SL (16 mM, Funakoshi) and lactose (3 mM, Wako
Pure Chemical, Osaka, Japan), as well as 3′-SL (16 mM, Funakoshi), were examined by TLC
using the aforementioned protocol.
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3

Enzymatic Characterization of Sucrose Phosphorylase

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d-Allose, d-glucose, α-Glc1P, d-gluconic acid, lactose, d-mannose, and d-xylose were purchased from Fujifilm Wako Pure Chemical (Osaka, Japan); N-acetyl-d-glucosamine, d-galactose, and sucrose were purchased from Nacalai Tesque (Kyoto, Japan); d-glucosamine was purchased from Tokyo Chemical Industry (Tokyo, Japan); cellobiose, d-galacturonic acid, and d-glucuronic acid were purchased from Sigma (St. Louis, MO, USA). β-(1 → 4)-Mannobiose was prepared as previously described29 (link). Lactoless L3 (β-galactosidase) was provided by Daiwa Kasei (Shiga, Japan). SP from Bifidobacterium longum was prepared according to the method described by Nishimoto and Kitaoka5 (link). One unit of SP was defined as the amount of enzyme required to phosphorolyze 1 μmol of sucrose in 1 min. SP activity was measured as follows: a reaction mixture (50 μL) containing appropriate concentration of enzyme, 20 mM sucrose, 40 mM sodium phosphate, 100 mM 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES)-NaOH buffer (pH 7.0), and 0.2 mg/mL bovine serum albumin (BSA, Nacalai Tesque) was incubated at 37 °C for 10 min. The enzymatic reaction was terminated by incubating the sample at 80 °C for 3 min, and the liberated d-fructose was measured using a d-Fructose/d-Glucose Assay Kit (Megazyme, Brey, Ireland).
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4

Recombinant Gal-9 Production and Purification

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Recombinant stable and mutant forms of human Gal-9 lacking the entire linker region were expressed and purified as described in our previous report (27 (link)). Lactose, sucrose, and fetal bovine serum (FBS) were purchased from Wako Chemicals. Cell Counting Kit-8 (CCK-8) was purchased from Dojindo Laboratories, and all other chemicals were obtained from Sigma Chemical.
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5

Comprehensive Catalog of Pharmaceutical Compounds

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Amikacin, caffeine, citrate, clozapine, dexamethasone, glimepiride, imipramine, ketotifen, lactose, sorbitol, and theophylline were purchased from Wako Pure Chemical Industries (Osaka, Japan). 3-Acetamidophenol, amiodarone, amitriptyline, ascorbate, perhexiline, and tamoxifen were purchased from Sigma-Aldrich (St. Louis, MO, USA). Chlorpromazine, desloratadine, isoproterenol, loratadine, maprotiline, and tilorone were purchased from Tokyo Chemical Industries (Tokyo, Japan). All compounds were of the highest available commercial grade.
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