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12 protocols using mebcyto apoptosis kit

1

TS-Mediated Photodynamic Therapy Evaluation

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Cells were seeded and incubated for 24 h. Following this, the medium was replaced with fresh medium supplemented with TS. TS was added to the culture medium at a final concentration of 40 μmol/L for KYSE30, 60 μmol/L for HCT116, and 25 μmol/L for MC38. The cells were incubated for 24 h, and in vitro TS-PDT was administered. After exposure to irradiation, the cells were cultured for 6 or 24 h. After each culture medium was collected and washed with PBS, the cells were removed. The removed cells and the corresponding culture media were centrifuged to obtain cell pellets. Each cell pellet was stained with the MEBCYTO Apoptosis kit (Medical & Biological Laboratories, Tokyo, Japan). All flow cytometric examinations were performed in triplicate on the FACSCanto II and analyzed using the FlowJo software.
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2

Apoptosis detection in A2780 and HCT116 cells

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A2780 and HCT116 cells (each 2.0 × 105 per well) were seeded into the wells of 6-well plates and incubated overnight with culture medium. The next day, diluted compounds were added to the culture media. At 24–48 h after incubation, the cells were harvested and stained with propidium iodide (PI) and FITC-conjugated Annexin V using the MEBCYTO® Apoptosis Kit (Medical & Biological Laboratories Co., Ltd., Nagoya, Japan) in accordance with the manufacturer's instructions. Annexin V binding and PI staining were analysed using the BD LSRFortessa™ cell analyser with FlowJo software (BD Biosciences).
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3

Apoptosis Induction Quantitation

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BAF‐derived cells were treated with imatinib and/or ginkgolic acid at the indicated concentrations for 24 h. Induction of apoptosis was quantitated using the MEBCYTO Apoptosis Kit (Medical and Biological Laboratories). Briefly, the cells (2 × 105) were collected, washed with PBS, and suspended in 90 μL binding buffer (containing 10 μL annexin V–FITC and 1 μL of 100 μg/mL DAPI). The samples were incubated in the dark for 15 min at room temperature and then analyzed by FACSCanto II (Beckton Dickinson, Franklin Lakes, NJ, USA) after addition of 400 μL binding buffer.
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4

Multiparametric Flow Cytometry Analysis

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EWS cell lines, human macrophages (M0, M1, and M2-like) and hBM-MSCs were analyzed by flow cytometry (FACSCanto II cytometer; Becton Dickinson) using the following antibodies: anti-CD99-FITC (3B2/TA8)(# 11–0997–42, eBioscience, RRID:AB_2016685), anti-CD14-FITC (#F0844, Dako), anti-CD68-FITC (#562117, BD Pharmingen), anti-CD80-PE (#5572227, BD), anti-CD86-FITC (#374204, BioLegend), anti-CD163-PE/Cy7(#25–1639–4, Affymetrix), anti-CD206-APC (#561763, BD), anti-CD47-PE (REA 220)(#130–123–754, Miltenyi Biotech, RRID:AB_2819520), and anti-calreticulin-PE (EPR3924) (LSC105731, LSBio-Life Span, RRID:AB_2069806). Detection and quantification of PS-positive cells was performed by flow cytometric analysis of annexin-V-FITC/PI-labeled cells (MEBCYTO Apoptosis Kit #4700, Medical & Biological Laboratories). Data are expressed as % positive cells or median fluorescence intensity (MFI). Flow samples were properly analyzed using FCS Express 7.18.0025 software (RRID:SCR_016431).
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5

Cytotoxicity Assay of Melanoma Cells

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Transfected A375 melanoma cells were plated in six-well plates until 90% confluence and then treated with cytotoxic agents overnight. The cells were cultured with etoposide (from 1 to 100 μM) or gemcitabine (from 10 to 100 μM). Cell death was determined by Annexin V and PI staining in accordance with the manufacturer’s instructions (MEBCYTO® Apoptosis Kit; Medical & Biological Laboratories Co., Ltd., Nagoya, Japan), and analyzed by flow cytometry.
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6

Dissociation and Phenotyping of Murine Pancreatic Tumors

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Murine pancreatic tumor was harvested and chopped into small pieces, and digested in 0.25% Trypsin EDTA (Thermo Fisher Scientific) at 37 °C for 15 min. After neutralizing with fetal bovine serum (FBS), samples were further digested with 2 mg/ml collagenase A (Roche) and DNase I (50 U/ml, Worthington, Columbus, OH) at 37 °C for 20 min. Following multiple washes with PBS supplemented with 2% FBS, cells were filtered through a 40 µm cell strainer. Red blood cells were lysed with ACK Lysing Buffer (Thermo Fisher Scientific) after passing through a strainer. Filtered single cells were incubated with anti-CD11b (Thermo Fisher Scientific), F4/80, Ly6C and Ly6G antibodies (Biolegend, San Diego, CA). LIVE/DEAD Fixable Dead Cell Stain Kit (Thermo Fisher Scientific) was used to exclude dead cells. Cells were analyzed by BD FACSAria II (BD Biosciences, Franklin Lakes, NJ). For cell apoptosis assay, MEBCYTO apoptosis kit (Medical Biological Laboratories, Nagoya, Japan) was used according to manufacturer’s protocol and analyzed using Guava easyCyte plus (Luminex, Austin, TX, USA).
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7

Annexin V-FITC Apoptosis Assay

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Detection and quantification of apoptotic cells was obtained by flow cytometric analysis (FACSCalibur; Becton Dickinson, San Jose, CA, USA) of Annexin V-FITC-labeled cells. This test was carried out according to the manufacturer's instructions (code no. 4700, Mebcyto® apoptosis kit; Medical & Biological Laboratories, Naka-ku Nagoya, Japan).
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8

Apoptosis Assay by Flow Cytometry

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Cells in culture, administered the treatment, were harvested, centrifuged at 800 ×g for 5 min, and then washed with PBS. The cells were then stained with annexin V-FITC and propidium iodide using a Mebcyto Apoptosis Kit (Medical & Biological Laboratories, Tokyo, Japan) following the manufacturer’s instructions. Flow cytometry was performed on a BD FACS Calibur (BD, Franklin Lakes, NJ, USA) with the BD CellQuest Pro software (BD, RRID:SCR_014489).
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9

Cell Proliferation and Apoptosis Assay

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Cell proliferation was determined by a 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay as previously described (24 (link)). The MTT absorbance was examined at 570 nm in a SpectraMax Plus 384 Microplate Reader (Molecular Devices, LLC, USA) at 24, 48, 72, 96, and 120 h after treatment. The apoptosis rate of cells was assessed using a MEBCYTO Apoptosis Kit (Medical and Biological Laboratories Co., Ltd., Aichi, Japan) according to manufacturer’s instructions. Briefly, 1 × 105 cells were stained with Annexin V-fluorescein isothiocyanate and propidium iodide (PI) for 25 min after trypsinization and then analyzed with flow cytometry (BD FACSCalibur, Becton Dickinson, San Jose, CA, USA). The apoptosis rate was determined as the ratio of Annexin V-positive apoptotic cells in all counted cells.
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10

Cell Cycle and Apoptosis Analysis

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Cells were seeded at 4 × 105 cells per well in 6-cm dishes and exposed to control (DMSO), 20 µM RARγi-1 or 50 µM RARγi-2 for 24 h. Cells were harvested and fixed with 70% ice-cold ethanol for 1 h for cell cycle analyses. The cells were then treated with RNase A (100 µg/ml) and stained with propidium iodide (50 µg/ml) (Dojindo Laboratories, Kumamoto, Japan). For apoptosis analyses, after seeding and drug exposure, cells were harvested and stained with propidium iodide and annexin V-FITC using a MEBCYTO® Apoptosis Kit (4700, Medical & Biological Laboratories, Tokyo, Japan) according to the manufacturer’s instructions.
The cell cycle and apoptosis status were analyzed using a FACS Verse (Becton, Dickinson and Company, Franklin Lakes, NJ, USA).
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