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Propidium iodine solution

Manufactured by Merck Group

Propidium iodide solution is a fluorescent dye used in biological research. It binds to DNA and is commonly used for cell counting and flow cytometry applications.

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5 protocols using propidium iodine solution

1

Cell Viability Assay: PI/FDA Staining

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A viability assay was carried out using PI/FDA staining. First 20 μl PI (propidium iodine solution, 1 mg/ml, Sigma) and 10 μl FDA (fluorescein diacetate solution 1 mg/ml, Sigma) were added to ELS and incubated at room temperature for 90 s. Next the ELS were washed once in PBS (Invitrogen) and then florescence at 617 nm (excitation) and 520 nm (emission) measured, with 1 s and 150 ms exposure for PI and FDA staining respectively. The total FDA intensity was compared to the total PI plus FDA intensity using Nikon imaging software, giving both a cell membrane integrity and metabolic viability read-out.
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2

Cell Viability Assay for Cryopreserved Cells

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A viability assay was carried out using PI/FDA staining. 20 μl PI (propidium iodine solution, 1 mg/ml, Sigma) and 10 μl FDA (fluorescein diacetate solution 1 mg/ml, Sigma) were added to ELS and incubated at room temperature for 90 s. The ELS were washed once in PBS (Invitrogen) and then florescence at 617 nm (excitation) and 520 nm (emission) measured, with 1 s and 150 ms exposure respectively. The total FDA intensity was compared to the total PI plus FDA intensity using Nikon imaging software, giving both a cell membrane integrity and metabolic viability read-out. This was carried out at 6, 24, 48, and 72 h post-thaw. The 6 h timepoint was chosen as this was the minimum time required to fully remove residual (pre-freeze) FDA-sensitive enzymes from non-viable cells.
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3

Cell Cycle Analysis by FACS

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The cells were fixed in 70% iced-cold ethanol and were incubated for 1 h at 4°C. The cells were washed, resuspended with 0.5 mg/ml RNase A (Sigma-Aldrich) for 1 h at 37°C and a 10 μg/ml propidium iodine solution (Sigma-Aldrich) was added in the dark at 4°C. The cells were observed by fluorescence microscopy and were analyzed using fluorescence-activated cell sorting (FACS).
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4

Kurarinone Induces Apoptosis Analysis

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Cells were seeded into 6-well plates (2×105 cells/well) and treated with kurarinone (6.25, 12.5, or 25 μM) for 24 h. The cells were harvested using trypsin, washed twice with PBS, and fixed in 70% ethanol overnight at −20°C. The fixed cells were stained in propidium iodine solution containing 1 mL of PBS, 50 μg/mL of propidium iodide (Sigma-Aldrich), 100 μg/mL of RNase A, and 0.1% Triton X-100 (Sigma-Aldrich) in constant darkness at room temperature for 20 min. Apoptotic cells in the sub-G1 population were detected using an AccuriTM C5 cytometer.
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5

Fluorescent Viability Assay for Cells

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A viability assay was carried out using PI/FDA staining. 20μl PI (propidium iodine solution, 1mg/ml, Sigma) and 10μl FDA (fluorescein diacetate solution 1mg/ml, Sigma) were added to ELS and incubated at room temperature for 90 seconds. The ELS were washed once in PBS (Invitrogen) and then florescence at 617 nm (excitation) and 520 nm (emission) measured, with 1 s and 150 ms exposure for PI and FDA staining respectively. The total FDA intensity was compared under a phase-contrast microscope to the total PI plus FDA intensity using Nikon imaging software giving a cell membrane integrity and metabolic viability read-out [4 (link), 6 (link), 31 (link)].
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