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Mmessage high yield capped rna transcription kit

Manufactured by Thermo Fisher Scientific
Sourced in United States

The MMessage high-yield capped RNA transcription kit is a laboratory equipment product designed for in vitro synthesis of capped RNA. The kit provides the necessary reagents and materials to efficiently produce capped RNA molecules from DNA templates.

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5 protocols using mmessage high yield capped rna transcription kit

1

Rescuing and Verifying Chimeric PRRSV

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To rescue the chimeric viruses, each full-length cDNA clone plasmid was separately linearized using the restriction enzyme PacI (for cDNA clones with RvJXwn as the backbone) or RsrII (for cDNA clones with RvHB-1/3.9 as the backbone). Then, the purified full-length cDNA clone was transcribed and capped using a mMessage high-yield capped RNA transcription kit (Ambion) according to the manufacturer's protocol. The purified RNAs were transfected into BHK-21 cells as previously described [40] (link). At 24 h post-transfection, the supernatants were harvested and serially passaged for three times in MARC-145 cells. The MARC-145 cells infected with the rescued viruses were examined by indirect immunofluorescence assay (IFA) using the monoclonal antibody (McAb) SDOW17 (Rural Technologies), which is specific for the PRRSV N protein [59] (link), [60] (link). To further verify the correctness of the exchanged regions, the RNAs of third-passage chimeric viruses were extracted and subjected to RT-PCR, followed by sequencing.
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2

Generating Chimeric PRRSV Viruses

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In vitro transcription and virus recovery were made as described before [26 ]. Briefly, chimeric full-length cDNA clones were linearized by cleavage with the restriction enzyme SwaI downstream from the poly (A) tail, then linearized plasmid DNA were transcribed in vitro according to the procedure of mMessage High Yield Capped RNA Transcription kit (Ambion, Austin, TX, USA). To rescue the viruses, the synthetic RNA was transfected into BHK-21 cells then passaged on MARC-145 cells. The rescued viruses were confirmed using an indirect immunofluorescence assay (IFA) with anti-PRRSV serum and sequencing, and named rHuN4-F5-ORF1a, rHuN4-F5-ORF1b, rHuN4-F5-ORF2-7 (genetic backbone of HuN4-F5 with 5′UTR + ORF1a, ORF1b or ORF2-7 + 3′UTR from HuN4-F112), and rHun4-F112-ORF1a, rHun4-F112-ORF1b, rHun4-F112-ORF2-7 (genetic backbone of HuN4-F112 with 5′UTR + ORF1a, ORF1b, or ORF2-7 + 3′UTR from HuN4-F5), respectively. The 4th passage viruses (P5) on MARC-145 cells were used on the following studies.
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3

Rescue of Chimeric Viruses via RNA Transfection

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The protocol for the rescue of the chimeric and parental viruses was performed as previously described [32 (link)]. First, each full-length cDNA clone plasmid was separately linearized using the restriction enzyme NotI (New England Biolabs). The linearized plasmid DNA was transcribed and capped using the mMessage High Yield Capped RNA Transcription kit (Ambion) according to the manufacturer’s instructions. The synthetic RNA was transfected into BHK-21 cells using the DMRIE-C reagent (Invitrogen) according to the manufacturer’s protocol. Finally, the supernatants were harvested 24 h post-transfection and serially passaged on MARC-145 cells.
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4

Rescue of PRRSV from Chimeric cDNA Clone

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The chimeric full-length cDNA clone of RvJX-miR-142t was linearized by cleavage with restriction enzyme PacI at the 3’end of the ploy-A tail. The capped RNAs were transcribed with SP6 RNA polymerase by using a mMessage high-yield capped RNA transcription kit (Ambion, Austin, TX) according to the manufacturer's instructions. The RNAs were quantified by spectrophotometry and then transfected into BHK-21 cells by using Invitrogen DMRIE-C reagent(Invitrogen life technologies) according to the manufacturer's instructions [3 (link)]. The supernatant of cell culture was obtained at 24 h post-transfection and then serially passaged on MARC-145 cells. The cytopathic effect (CPE) was observed daily. The rescued viruses were confirmed by an immunofluorescence assay (IFA) using PRRSV N protein-specific monoclonal antibodies (prepared and preserved by our laboratory).
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5

Virus Rescue and Propagation

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Virus rescue was performed as previously described. Briefly, all the full-length recombinant cDNA clones were linearized and transcribed to generate capped RNA transcripts using the mMessage High-yield Capped RNA Transcription kit (Ambion, Austin, TX, USA) according to the manufacturer’s instructions. The resulting RNA transcripts were purified with a MEGA Clear kit (Ambion, Austin, TX, USA) and a total of 1 µg RNA was subsequently transfected into BHK-21 cells with DMRIE-C reagent (Invitrogen, Carlsbad, CA, USA). After 24 h, the transfected cells were frozen at −20 °C and thawed. The supernatant samples were collected and passaged on MARC-145 cells. The rescued viruses were confirmed via sequencing, and the 4th passage (on MARC-145 cells) viruses were used in the flowing studies.
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