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Phospho s6 ribosomal protein ser235 236

Manufactured by Cell Signaling Technology
Sourced in United States, United Kingdom

The Phospho-S6 Ribosomal Protein (Ser235/236) is a lab equipment product that detects the phosphorylation of the S6 ribosomal protein at serine residues 235 and 236. This product is used to monitor the activity of the mTOR signaling pathway, which regulates cell growth and proliferation.

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34 protocols using phospho s6 ribosomal protein ser235 236

1

Evaluating Signaling Pathway Responses

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Cells were treated with WX-554 and WX-037 at 1 or 10 times the half maximal growth inhibitory concentration (GI50) in DMSO, or 0.5% (v/v) DMSO alone, for 24 h. Western blots were prepared, probed with phospho-4EBP1 (Thr37/46) (#2855), phospho-p44/42 MAPK (Thr202/Tyr204) (#4370), phospho-AKT (Ser473) (#4060) or phospho-S6 ribosomal protein (Ser235/236) (#4858) monoclonal antibodies obtained from Cell Signalling Technology (New England BioLabs (UK) Ltd, Hertfordshire, UK) and developed as described previously [23 (link)]. Blots were then stripped (100 mM 2-mercaptoethanol, 2% (w/v) SDS and 62.5 mM Tris pH6.8 at 55 °C for 30 min) and re-probed with the respective total monoclonal antibody (4EBP1 (53H11) (#9644), p44/42 MAPK (ERK1/2) (#4695), AKT (pan) (C67E7) (#4691) or S6 ribosomal protein (5g10) (#2217)) obtained from Cell Signalling Technology (New England BioLabs (UK) Ltd, Hertfordshire, UK) and developed as described above.
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2

Modulation of mTOR and eIF2α Pathways

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Rapamycin (Rapa) was purchased from Tocris Bioscience (Bristol, UK). Cycloheximide (CHX), tunicamycin (TUN), 6-diazo-5-oxo-L-norleucine (DON), reduced L-glutathione (GSH), reduced glutathione ethyl ester (GSHee) were from Sigma-Aldrich (St. Louis, MO, USA). OU749, buthionine sulfoximine (BSO), and ferrostatin-1 (Fer-1) were from Cayman Chemicals (Ann Arbor, MI, USA). Antibodies specific for p70S6 kinase, phospho-p70S6 kinase (Thr 389), S6 ribosomal protein, phospho-S6 ribosomal protein (Ser 235/236), eIF2α, phospho-eIF2α (Ser 51), PERK, Bip and horseradish peroxidase (HRP)-linked secondary antibodies were from Cell Signaling Technology (Danvers, MA, USA). Antibody specific for phospho-GCN2 (Thr 899) was from Abcam (Cambridge, UK). ATF4 antibody was from Santa Cruz Biotechnology (Dallas, TX, USA).
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3

Mouse Liver Protein Extraction and Western Blotting

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Mouse liver tissue was homogenized in ice-cold radioummunoprecipitation (RIPA) buffer (1% Nonidet P-40, 1% sodium deoxycholate, 0.1% SDS, 0.15 M NaCl, 10 mM Tris (pH 7.2), 0.025 M β-glycophosphate (pH 7.2), 2 mM EDTA, and 50 mM sodium fluoride) with protease and kinase inhibitors (0.05 mM AEBSF, 10 μg/ml aprotinin, 10 μg/ml pepstatin, 1 mM orthovanadate, 10 μg/ml leupeptin, 1 mM microcystin LR). The protein concentration was measured using the BCA Protein Assay (Pierce, Rockford, IL). Equal amounts of protein were separated by SDS-PAGE, transferred to Immobilin-P membranes (Millipore, Bedford, MA) and blotted with antibodies from the following sources: phospho-S6 Ribosomal Protein (Ser235/236) (#2211), S6 Ribosomal Protein (#2217), phospho-Akt (Ser 473) (#4060), Akt (#9272), Tsc1 (#4906), and Pten (#9552) all from Cell Signaling (Boston, MA). Beta-Actin (#A5441) was purchased from Sigma (St. Louis, MO).
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4

Molecular Mechanism Regulation Assay

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N-Hydroxyphthalimide was purchased from Accela ChemBio Co., Ltd. (Shanghai, China). Propidium iodide (PI), RNase A and 4,6-diamidino-2-phenylindole (DAPI) were from Sigma-Aldrich. Antibodies of mTOR, Phospho-mTOR (Ser2448), Phospho-mTOR (Ser2481), S6K1, Phospho-S6K1 (Thr389), Phospho-S6 Ribosomal Protein (Ser235/236), 4E-BP1, Phospho-4E-BP1 (Ser65), Phospho-Akt (Ser473), Phospho-Akt (Thr308), Cleaved PARP, Cleaved Caspase 3, Caspase 9, cyclin B1, cdc2 were obtained from Cell Signaling Technology; antibodies of S6, Akt, P-ERK1/2, β-actin, Caspase 3, Caspase 8, Bcl-xL, survivin were from Santa Cruz; antibody of ERK was from Epitomics; antibody of eIF4E was obtained from BD Biosciences; Alexa Fluor® 647 donkey anti-mouse IgG antibody was purchased from Invitrogen; all the other secondary antibodies were from Sigma-Aldrich.
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5

Immunohistochemical Analysis of Xenograft Samples

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Xenograft sections (3um) were antigen retrieved with 10mM citrate acid, 0.05% Tween 20, pH6.0), incubated with antibodies targeting Ki67 (Abcam, ab16667) 1:500, Cleaved Caspase-3 (Asp175)(5A1E)(Cell Signaling, 9664) 1:200, Phospho-AKT (Ser473) (Cell Signaling, 8101) 1:20 and Phospho-S6 Ribosomal Protein (Ser235/236) (Cell Signaling, 2211) 1:300.
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6

Moracin N Induces Autophagy-Mediated Apoptosis

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The antibodies used in the present study were purchased from Cell Signaling Technology, including Bcl-2, Bax, caspase 3, β-actin, LC3, AKT, phospho-AKT (Ser473), mTOR, phospho-mTOR (Ser2448), S6 ribosomal protein, phospho-S6 ribosomal protein (Ser235/236) and ATG5, with their catalog number D17C4, D2E11, D3R6Y, E4D9Z, D11, 11E7, D9E, 7C10, D9C2, 54D2, D57.2.2E, and D5F5U, respectively. Other antibodies included cytochrome c (M1701-9), goat anti-rabbit/mouse IgG-HRP (ImmunoResearch Laboratories) and FITC goat anti-mouse IgG (Beyotime, A0562).
Reagents used in our research included: cell cycle and cell apoptosis analysis kits (KEYGEN, KGA511 and KGA107); Hochest33342 staining kit (Beyotime, C1025); mitochondrial membrane potential detection kit and ROS measurement kit (NJJCBIO, G009-1-3 and E004-1-1), MitoTracker Deep Red FM (Life Technologies, M22426), Lyso-Tracker Red (Invitrogen, L7528), cholorquine (CQ, PubChem, 2719), 3-MA, and N-acetylcysteine (NAC) (aladdin, M129496 and A105422). Moracin N (MAN) was isolated and purified by Prof. Tian Jingkui from the Key Laboratory of Biomedical Engineering at Zhejiang University.
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7

Histological Analysis of Mouse Uterus

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For histological analyses, mouse uteri were fixed in 10% formalin solution (Sigma, MO, USA) overnight at 4°C and then transferred to 70% ethanol until processing. The fixed tissues were dehydrated in a series of graded ethanol, cleared in xylene, and embedded in paraffin wax. Embedded tissue samples were sectioned at 6µm and mounted on slides. Haematoxylin and eosin (H&E) staining and IHCs were performed using standard protocols described earlier [23 (link)]. Tissue sections were incubated overnight at 4°C with following primary antibodies: Phospho-S6 Ribosomal protein Ser235/236 (1:400; Cell Signalling Technologies, MA, USA), CK8 (Developmental Studies Hybridoma Bank, IA, USA). Biotinylated secondary antibodies (Jackson ImmunoResearch Labs, PA, USA or Thermo Fischer Scientific, Australia) were used followed by incubation with horseradish peroxidase-conjugated streptavidin (Thermo Fisher Scientific). Sections were then exposed to Diaminobenzidine (DAB, Sigma) to develop colour. Sections were counterstained with hematoxylin. Images were captured using Olympus DP72 microscope and the Aperio AT2 slide scanner (Leica Biosystems, Victoria, Australia). The gain and exposure time were set constant across tissue samples.
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8

Immunohistochemical Analysis of Mouse Stomach

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The stomachs taken from mice were opened in the minor curvature, fixed in 4% formaldehyde for 2 h at room temperature, dehydrated and embedded in paraffin wax. 2–3 μm sections were deparaffinized in xylene, and rehydrated in a graded series of ethanol. Antigen retrieval was performed when necessary in boiling natrium citrate buffer (PH6.0) for 15 min. Antibodies directed at Glucagon (Cell signaling,1:100), Chromogranin B (Santa Cruz, 1:100), SV40 T Ag (Santa Cruz, 1:500), Ki-67 (Dako, 1:50), Hydrogen Potassium ATPase Beta (Abcam, 1:1000), Phospho-S6 Ribosomal Protein (Ser235/236) (Cell signaling, 1:100), Phospho-S6 Ribosomal Protein (Ser240/244) (Cell signaling, 1:800), were applied to the sections for 2 h incubation at room temperature. Sections were then treated with HRP-coupled secondary antibodies (ImmPRESS Anti-Rabbit Ig Polymer Detection Kit, Vector Labs) or biotin-conjugated secondary antibody followed by avidin-biotin-peroxidase complex (VECTASTAIN Elite ABC Kit, Vector Labs). Primary antibodies were visualized by AEC or DAB as substrate.
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9

Verteporfin and Metformin Cytotoxicity Protocol

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Verteporfin (Visudyne) was obtained from Novartis (Novartis, Basel, Switzerland).
Metformin, MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide) and ribonuclease-A were purchased from Sigma Aldrich (St.Louis, MO, USA). Propidium iodide was purchased from Invitrogen (Carlsbad, CA, USA). The following primary antibodies were purchased from Cell Signaling technology (Danvers, MA, USA) and used diluted 1:1000 unless stated otherwise: c-myc, axl, phospho-S6 ribosomal protein (Ser235/236), phospho-4EBP1 (Thr37/46), p21 Waf1/Cip1, p27Kip1, LC3B, phospho-p38 MAPK (Thr180/Tyr182) and p44/42 MAPK (Erk1/2), PCNA (1:2000), 4-Oct, survivin, pAkt (S473) (1:2000), pAkt (T308). The following primary antibodies were purchased from Epitomics (Burlingame, CA, USA): cyclin D1, D3, E1, E2, A2 and the following from Santa Cruz (Dallas, Texas, USA): cyr61 (1:500), VEGFA (1:500), CTGF (1:500).
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10

Immunohistochemical Analysis of Tumor Markers

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Tumor sections (3 μm) were antigen retrieved with 10 mmol/L citrate acid, 0.05% Tween 20, pH6.0, and incubated with antibodies as indicated (Ki67 (Abcam, ab16667) 1:500; cleaved caspase-3 (Asp175; 5A1E; Cell Signaling Technology, 9664) 1:200; phospho-INSR (Tyr 1162; Thermo Fisher #AHR0271) 1:100; phospho-AKT (Ser473; Cell Signaling Technology, 8101) 1:20; and phospho-S6 ribosomal protein (Ser235/236; Cell Signaling Technology, 2211) 1:300).
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