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25 protocols using aβ1 40

1

Evaluation of HEPS Neuroprotection Against Aβ

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The MTT assay was used for three experiments. First, the cell cytotoxicity of HEPS was measured by plating exponentially growing PC12 cells at a density of 5 × 104 cells/well in 96-well plates, which were exposed with or without 25, 50, 100, 200, 250 μg/mL of HEPS for 24 and 48 h. The second stage of the assay measured cell cytotoxicity of Aβ1-40 (Sigma-Aldrich, USA) by adding 1.2 μM Aβ1-40 to PC12 cells for 24 and 48 h. The third stage was a cell protection assay, in which PC12 cells were incubated with 25, 50, 100, 200, 250 μg/mL of HEPS for 24 h, and 1.2 μM Aβ1-40 was added for 24 and 48 h. After each of these three experiments, the cells were incubated with 2 mg/mL 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT) for 4 h at 37 °C, the media was carefully removed and 100 μl of DMSO was added to each well. Dark blue formazan crystals formed, the intact cells were solubilized for 30 min, and the absorbance at 570 nm was measured with a PowerWave XS ELISA reader (Bio-Tek, USA). The results were expressed as the percentage of MTT reduction, assuming the absorbance of control cells was 100 %.
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2

RPE Cell Line Aβ1-40 Exposure Assay

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The human RPE cell line (ARPE-19/HPV-16) was purchased from the American Type Culture Collection. The cell line was cultured at 37°C with 5% CO2 in an incubator (Thermo Fisher Scientific, Inc.) with DMEM/F-12 medium (cat. no. 11330057; Gibco; Thermo Fisher Scientific, Inc.) containing 10% fetal bovine serum (FBS; Gibco; Thermo Fisher Scientific, Inc.) and 1% 10,000 U/ml penicillin/10,000 µg/ml streptomycin (Gibco; Thermo Fisher Scientific, Inc,.). The cells were subcultured every 3 days in a 35-mm culture flask (Corning Inc.). After the cells (2×104 cells/well) were seeded in 96-well plates (Corning Inc.), and different concentrations of Aβ1-40 (0, 0.01, 0.1, 0.5, 1, 5 and 10 µmol/ml; Sigma-Aldrich; Merck KGaA) mixed with culture medium were added to the cells in order to establish OS, the cells were incubated at 37°C for 24 h. For subsequent experiments, 0.5 µmol/ml Aβ1-40 was used. Following culture for 24 h, the morphology of cells in the control and 0.5 µmol/ml Aβ1-40 groups was observed under an inverted phase contrast microscope (magnification, ×200; Olympus Corporation).
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3

Amyloid Aggregation Assay Protocols

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Ubiquitin from bovine erythrocytes, recombinant Human Insulin and Thioflavin T were purchased from Sigma Aldrich and used without further purification. Aβ(1-40) was purchased from Biopeptide and pre-treated as previously reported 64 .
All experiments on UBQ samples were performed in 20 mM sodium phosphate buffer, pH 6.5. The sample was freshly prepared and filtered through 0.20 μm filters (17761, Sartorious), just before the measurements. Different protein concentrations had been used: 0.5 mg/ml, 0.7 mg/ml and 1.8 mg/ml. Protein concentration was spectrophotometrically determined using a molar extinction coefficient of 1254 dm 3 mol -1 cm -1 at 280 nm 31 . Human Insulin powder (Sigma-Aldrich) and Aβ (1-40) peptide (prepared as described in 65 ), were dissolved in 20mM sodium phosphate buffer, pH 6.5.
Protein concentration of Human Insulin and Aβ(1-40) peptide were estimated by means of absorbance measurements using a molar extinction of 1.067 cm -1 (mg/ml) -1 at 276 nm 66 , and of 1390 M -1 cm -1 at 276nm, respectively 67 .
In order to obtain aggregates, 0.2 mg/ml Human Insulin in 20 mM sodium phosphate buffer, pH 6.5, was incubated at 60°C stirring at500 rpm for 24 hours, and 0.2 µM Aβ(1-40) in 20 mM sodium phosphate buffer, pH 6.5, was incubated at 37 degrees with stirring 500 rpm for 24 hours.
Resulting aggregates were found to be positive to Thioflavin T test.
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4

Aβ1-40 Quantification in Brain Homogenates

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Total brain homogenates were used for all the ELISA. For the Aβ1–40 (Millipore cat#EZHS40) we analyzed 50 μg per well following the protocol provided.
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5

Alzheimer's Disease In Vitro Assay

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Aluminium chloride hexahydrate, Maltol, Tox 7 kit, (3-(4, 5-dimethyl- thiazol-2-yl)-2, 5-diphenyl tetrazolium bromide (MTT) dye and 2,7-dichlorofluorescein diacetate (DCFH-DA) were purchased from Sigma Chemical Co. Ltd. (St. Louis, MO, USA). DMEM/F12 cell culture medium, trypsin–EDTA, fetal bovine serum (FBS) and 100X antibiotic and antimycotic solution were purchased from (Gibco, USA). Caspase 12 and p53 antibodies were purchased from Abcam (Cambridge, UK), while Nrf2, NQO1, pAKT, p21, Bax and Bcl2 were procured from Santa Cruz (Texas, USA). CHOP/GADD153 and ubiquitin antibodies were purchased from BioLegend (USA) and Aβ1-40 was purchased from Millipore (MA, USA). Caspase 9, 3 and 12 activity kits as well as caspase 3, 9 and 12 inhibitors were purchased from BioVision Inc. (Mountain View, CA) while pan-caspase inhibitor (QVD-OPh) was procured from Abcam. All other chemicals were obtained from Merck unless otherwise mentioned.
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6

Drift Assessment in Amyloid-Beta Assays

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Finally, drift was assessed by analyzing QC samples at either end of the plate at five occasions (Innogenetics Aβ1-42) or by running the standard curve at both ends of the plate (Merck Millipore Aβ1-40).
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7

Validating ELISA Assays for Amyloid-β

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We performed a validation to evaluate the performance of the ELISA assays (i.e., Innogenetics Aβ1-42 and Merck Millipore Aβ1-40) with emphasis on within- and between plate imprecision, hook effects, cross reactivity, and drift across the plates. This validation was performed using QC samples at two concentrations (20 and 250 pg/mL for Aβ42, 25 and 250 pg/mL for Aβ40), prepared in sample buffer provided in the ELISA kit.
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8

Antibody and ELISA Reagent Procurement

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Antibodies against GFAP and amyloid beta (Aβ) were purchased from Cell Signaling Technology Inc. (Danvers, MA, USA). Anti-c-Fos antibody was purchased from Abcam (Cambridge, MA, USA). Anti-Iba-1 antibody was purchased from Wako Chemicals USA, Inc. (Richmond, VA, USA). Elite Vectastain ABC reagents, Vector VIP, biotinylated anti-rabbit, and anti-mouse antibodies were purchased from Vector Laboratories Inc (Burlingame, CA, USA). The Aβ 1–40 and Aβ 1–42 enzyme-linked immunosorbent assay (ELISA) kits were obtained from EMD Millipore (Burlington, MA). Standards used in mass spectroscopy analysis were purchased from Millipore-Sigma Burlington, MA, USA. Autosampler vials were obtained from ThermoFisher Scientific, (Waltham, MA, USA), Silanized micro-vial inserts from Agilent (Santa Clara CA; part #5181–8872) and inserts were from VWR (Radnor, PA, USA).
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9

Precision Evaluation of Aβ ELISA

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Within plate precision was calculated from the analyses of six replicates of each QC-sample (in duplicate) at one occasion. Between plate precision was calculated from the same QC samples at six (Innogenetics Aβ1-42) or four (Merck Millipore Aβ1-40) different ELISA plates, at different days, using two different ELISA lots.
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10

Alzheimer's Disease Neuroprotection Protocol

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SL was purchased from Shanghai Taiwei Pharmaceutical Company Limited (China). Acetone insoluble substance was 93.9%. The main chemical compositions included 84.2% phosphatidylcholine, 2.4% phospholipid acyl amine, and no phosphatidylinositol. SIF was purchased from ZHT Sci-Tech (Beijing) Co., Ltd. (China). The total isoflavone content of SIF was 92.15%. The main chemical compositions included 17.64% genistein, 53.24% daidzein, and 21.27% glycitein. SL and SIF were dissolved in 0.5% CMC-Na. Synthetic Aβ1-40 and Aβ25-35 were purchased from Sigma-Aldrich (St. Louis, MO, USA). They were dissolved in N.S. and incubated at 37°C for three days to form aggregation [13 (link)].
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