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93 protocols using stereotaxic apparatus

1

Hippocampal LFP Recording in Kindled Rats

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Each rat was deeply anesthetized by intraperitoneal injection of pentobarbital (60 mg/kg) and placed on a stereotaxic apparatus (RWD Life Science, Shenzhen, China). Then, a U‐shaped frame was fixed to the skull to hold the head.34 Before LFP recording, electrodes were implanted into the dorsal hippocampus (anterior‐posterior: −3.6 mm; medial‐lateral: −2.8 mm; dorsal‐ventral: −3.0 mm) and attached to an LFP signal connector, which was fixed to the skull using dental acrylic cement. LFPs were recorded with a MAP data acquisition system (Plexon) after the last PTZ injection. The signals were filtered (0.1‐500 Hz), preamplified (1000×), and digitized at 4 kHz. The recordings were carried out after the rats had been successfully kindled according to Racine's classification.
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2

Intracerebroventricular Silencing of ATF4 and Parkin

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ATF4 siRNA (sense primer 5-GCUGCUUAUAUUACUCUAATT-3 and antisense primer 5-UUAGAGUAAUAUAAGCAGCTT-3) and parkin siRNA (sense primer 5-CCAACUCCCUGAUUAAAGATT-3 and antisense primer 5-UCUUUAAUCAGGGAGUUGGTT-3) were designed and chemically synthesized by GenePharma Corporation, Shanghai, China. The RNase-free water was used to dissolve siRNA reaching the final concentration of 2 μg/µL. The intracerebroventricular injection of siRNA was performed as previously described [31 (link)]. Briefly, rats were placed in a stereotaxic apparatus (RWD life Science, Shenzhen, China) after being anesthetized with 4% chloral hydrate (400 mg/kg, i.p) and the bregma point was then exposed. A Hamilton syringe of 25 µL volume was perpendicularly inserted at 1.0 mm posterior to bregma, 2.0 mm lateral to midline, and 3.5 mm below the skull surface. Afterwards, 15 μL of a solution containing ATF4 siRNA or parkin siRNA (2 μg/μL, 1 μL/min) was injected into the left lateral ventricle. The needle was kept in place for 10 min and then withdrawn slowly. MCAO model was established after 24 h upon siRNA injection.
Mdivi-1 (mitochondrial division inhibitor-1) administration (10 mg/kg, i.p.) was performed at the onset of reperfusion as previously described [3 (link)].
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3

Low-Intensity Focused Ultrasound Stimulation

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The LIFUS system consists of (1) two function generators (DG4162 and DG822, RIGOL, Beijing, China), (2) a custom-designed radio frequency amplifier (SWA400A, North Star, Shijia zhuang, China), (3) a 0.5MHz single element immersion transducer (V318, Olympus, Tokyo, Japan), and (4) a custom-designed acoustic collimator (Zhang et al., 2019 (link)). The schematic diagram of LIFUS system is shown in Figure 1A. The LIFUS parameters used in this study were as follows (shown in Figure 1B): center frequency = 0.5 MHz; pulse repetition frequency (PRF) = 2.0 kHz; the number of cycles = 150 (0.3 ms tone burst duration, TBD); the sonication duration (SD) = 0.5 s; the interstimulus interval (ISI) = 2 s, and the spatial peak temporal average intensity (Ispta) = 500 mW/cm2. The targets of LIFUS are the bilateral mPFC. In addition, the LIFUS treatment was performed daily for 10 min on each side. During the LIFUS, all rats were mounted on the stereotaxic apparatus (RWD, Shenzhen, China) and anesthetized with 1% isoflurane (RWD, Shenzhen, China). Before applying the LIFUS, the hair on the bilateral mPFC was shaved. The other rats in either CON or VD groups underwent the same procedures including anesthesia but without LIFUS.
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4

Lateral Ventricle Injection in Mice

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Wild-type adult C57BL/6 mice were first anesthetized and placed on a stereotaxic apparatus (RWD Life Science, Shanghai, China), then drug was injected into the right lateral ventricle (anteroposterior, −1.0 mm; mediolateral, −0.5 mm, dorsoventral, −2.0 mm) in a duration of 5 min. After injection, the needle was left in place for 10 min before being withdrawn to reduce backflow. Mice were allowed to recover in a dark warm place.
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5

Intracerebral Hemorrhage Mouse Model

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The ICH model was conducted according to our previously developed method (Yuan et al., 2019 (link)). Briefly, mice were immobilized on the stereotaxic apparatus (RWD Life Science Co, Shenzhen, China) after being anesthetized with 3% isoflurane for induction and 1.5% for maintenance. Whole blood (20 μl) without anticoagulant was obtained from its tail and then injected into the left striatum (0.8 mm anterior and 2 mm lateral of bregma, at a depth of 3.5 mm) using a syringe pump (Hamilton, Bonaduz, AG) at 2.0 μl/min. The microinjector was detained for 10 min. The sham group was injected with 20 μl saline using the same procedures. Unsuccessful ICH models that were asymptomatic or dead were excluded from this study. Perihematomal cerebral tissues were collected for oxylipins quantification at 0.5, 1, and 3 days after ICH or 1 day after saline injection.
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6

Amiloride Injection for Stress Response

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All the rats that received intracerebroventricular injection (i.c.v.) were anesthetized using a mixture of ketamine and xylazine (100 : 10 mg kg−1) and fixed on a stereotaxic apparatus (RWD, Shenzhen, China). After the skin and muscles were dissected, a guide cannula was implanted into the right lateral cerebral ventricle (0.8 mm posterior from the bregma, 1.5 mm lateral from midline, and 5 mm below the skull surface). The cannula was secured to the rat's skull with dental cement. Rats were allowed to recover for 5 days before testing. The data from the rats with missed injections was excluded from the study. For the intraventricular injection, amiloride was dissolved to a final concentration of 100 μM in artificial cerebrospinal fluid (ACSF) containing (in mM): 129 NaCl, 2.4 CaCl2, 3 KCl, 1.3 MgSO4, 3 HEPES, 20 NaHCO3, 1.2 KH2PO4, and 10 glucose. The amiloride (2 μl) was i.c.v. injected by an infusion pump for 2 min using a 10 μl Hamilton syringe and PE tubing connected to a 30-gauge stainless steel injector 30 min before the stress. The vehicle-treated stressed group received the same volumes of ACSF.
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7

Harmonic Ultrasound Imaging of the Brain

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A commercialized Vivid E9 diagnostic ultrasound system (GE Healthcare, Milwaukee, WI, USA) was used in this study. An ultrasound beam was generated by a M5S-D phased array transducer operating in the second harmonic mode (transmit: 1.5 MHz, receive: 3.0 MHz). The transducer was positioned using a stereotaxic apparatus (RWD Life Science Co., Ltd, Shenzhen, China) to ensure the acoustic beam targeted the brain precisely. The transducer was submersed in a water tank containing deionized and degassed water whose bottom was sealed by a polyurethane membrane. Focal depth was set at 5 cm, which is approximately 3 mm below the dorsal surface of the skull.
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8

Rat Striatal Intracerebral Hemorrhage Model

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We established a rat ICH model by inducing ICH in the striatum (caudate + putamen), according to the method of Ni et al. (2015 (link)). Briefly, rats were anesthetized with 3.5 and 1.5% isoflurane for induction and maintenance, respectively, and then immobilized on a stereotaxic apparatus (RWD Life Science Co., Shenzhen, China), followed by the drilling of a 1-mm diameter burr hole, 0.2 mm anterior and 3.5 mm lateral to the bregma. We then injected a total of 75 μl of autologous blood into the striatum using a Hamilton needle attached to a micropump (RWD Life Science Co.), 5.5 mm ventral to the skull surface, as described in our previous study (Yuan et al., 2019 (link)).
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9

In vivo gene editing using Rosa26 Cas9 mice

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The application of the Cre-dependent Rosa26 Cas9 knockin mice for the in vivo gene editing was described previously[15 (link)]. The Cas9 mice with C57BL/6 background were used for gene knockout in the hypothalamus. For the stereotactic surgery, eight-week-old Cas9 mice were deeply anesthetized with isoflurane and fixed on a stereotaxic apparatus (RWD Life Science, China) with ear bars. After exposing the skull via a small incision, an injection needle was inserted into the brain, and the Epha3 sgRNA AAVs or control viruses (AAV without sgRNA) was injected at a rate of 25 nL per minute using a micro syringe pump. After injection, the pipette was left in position for another 5 min to allow enough absorption and spreading of AAVs before being withdrawn. The coordinates and injection volume used in the study were as follows: the ARC (anterior-posterior [AP], −1.60 mm; dorsal-ventral [DV], −5.80 mm; left-right [LR], ±0.30 mm, 500 nL/side). The AAV-injected mice were allowed to recover for two weeks and then feed with either chow or high-fat diet. All stereotaxic injection sites in the hypothalamus were verified by sequencing section and imaging. All 'missed' or 'partially injected' animals were excluded from data analysis.
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10

Viral Targeting of Nucleus Accumbens Subregions

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Mice were placed in a stereotaxic apparatus (RWD Life Science, San Diego, CA, USA) under isoflurane (3%, inhalation) anesthesia, and the skull was exposed. A small hole was then made using a dental drill. Virus was bilaterally injected into the nucleus accumbens core (from the bregma: AP + 1.4 mm, ML ± 1.5 mm, DV -3.6 mm from the brain surface at an angle of 10°: 1.0 μL was applied to each side using a Hamilton syringe), the lateral shell (from the bregma: AP + 1.0 mm, ML ± 1.8 mm, DV -4.9 mm from the skull at an angle of 0°: 300 nL was applied to each side using a Nanoject III (Drummond Scientific Company, Broomall, PA, USA)) and the medial shell (from the bregma: AP + 1.5 mm, ML ± 0.5 mm, DV − 4.7 mm from the skull at an angle of 0°: 300 nL was applied to each side using a Nanoject III (Drummond Scientific Company)).
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