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Optical microscopy

Manufactured by Olympus
Sourced in Japan, Germany, China

Optical microscopy is a core laboratory equipment that uses light to magnify and observe small-scale objects. It employs various optical components, such as lenses and mirrors, to enable the visualization of microscopic details that are not visible to the naked eye. This equipment provides a fundamental tool for scientific research, medical diagnostics, and material analysis across diverse fields.

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99 protocols using optical microscopy

1

Kidney Histopathological Evaluation

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Kidney paraffin-embedded sections were stained using haematoxiylin-eosin following the standard protocol. Subsequently, two independent, blinded to treatment researchers observed the kidneys with the optical microscopy (Olympus, Hamburg, Germany) at a final magnification of 400×. Kidney-embedded paraffin sections were stained with haematoxylin–eosin, according to standard protocol and then were observed with an optical microscopy (Olympus, Hamburg, Germany) at a final magnification of 400×. Kidney injury scores were assessed analyzing glomerular and tubular morphology, inflammatory cells infiltration, glomerular hypercellularity, proximal tubules brush border detachment, tubular lumen narrowing and epithelial tubules alterations. Further details about kidney injury scores are reported by Dos Santos et al. [26 (link)].
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2

Immunohistochemistry on Adherent Cells

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For immunohistochemistry, cells were plated on gelatinized cover slips in 35-mm petri dish. At about 90%–100% confluence, cell on cover slips were washed, fixed, blocked, and then primary antibody was added and incubated for 12 h at 4°C. After the washes, the secondary antibody was added at 37°C for 1 h. The stained sections were examined and imagined under confocal (Leica Microsystems GmbH, Mannheim, Germany) or optical microscopy (Olympus Optical Co. Ltd, Tokyo, Japan).
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3

Histological Evaluation of Implants

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The specimens were fixed in 10% buffered formalin (Merck, Darmstadt, Germany) for 24 h, followed by dehydration in a graded series of ethanol and embedding in paraffin. In the transverse axis to the implant, thin sections (5 μm) were prepared using a microtome (Leica Microsystems SP 1600, Nussloch, Germany). The specimens were stained with hematoxylin and eosin (H.E. stain, Merck) and examined using optical microscopy (Olympus Optical Co., Tokyo, Japan).
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4

Wound Healing Assay with PLGA NPs

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HUVECs were seeded on a 6-well plate to 90% confluency, the scratches were made on the bottom of the 6-well plate. Then cells were treated with 100 μg mL−1 PLGA NPs for 24, 48 and 72 h and cultured with medium serum-free. Optical microscopy (Olympus Optical Co., Ltd.) was used to take photograph.
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5

Profiling Cervical Cancer Transcriptome

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Gene expression profiling data with the series number GSE64217 was obtained from the the Gene Expression Omnibus (GEO) database. GSE64217 was provided by the Indian Institute of Technology Kharagpur, School of Medical Science and Technology, Multimodal Imaging and Computing for Theranostics (West Bengal, India). The data included 2 cases of CIN, of cervical squamous cell carcinoma, and 2 of normal tissues. Biopsy samples were collected during hysterectomy, and half of each sample was analyzed with optical microscopy (Olympus, Tokyo, Japan) by a pathologist for histopathological confirmation and the other half was used for microarray analysis.
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6

Propidium Iodide Staining of RD Cells

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After gently removing the culture medium, RD cells were stained in situ with 4.5 μM of propidium iodide (PI) (40747-B, Yeasen, Shanghai, China) in buffer (40747-C, Yeasen, Shanghai, China) for 15 min at room temperature in the dark place. The morphological changes were observed and photographed by optical microscopy (Olympus, Tokyo, Japan). PI staining was observed at excitation wavelength 488 nm with emission filter 630 nm by fluorescence microscopy (Leica, Nussloch, Germany).
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7

Apoptosis Analysis of Colorectal Cancer Cells

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Apoptosis of HCT116 and SW620 cells with or without LINC01006 downregulation was examined using In Situ Cell Death Detection Kit-Fluorescein (Roche, USA) that based on Tunel method. Briefly, transfected HCT116 and SW620 cells were fixed by 2% PFA and permeated, and then the TUNEL staining was conducted according to the manufacturer’s instructions. The labeled samples were analyzed using Optical microscopy (Olympus, Japan).
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8

Immunohistochemical Analysis of CD45

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After paraffin section was dewaxed and hydrated at room temperature, antigen retrieval was then performed by heat inactivation in citrate buffer (pH 6.0; boiled for 10 minutes). Endogenous peroxidase activity was quenched by immersion in 3% hydrogen peroxide for 10 min. The sections which were added with 50 µl of goat serum sealing solution, were put in a wet box for 10 minutes. Then, the sections were incubated with CD45 (Abcam) overnight. After the secondary antibody was incubated at room temperature for 30 minutes, the sections were developed with 3, 3′ diaminobenzidine solution. The positive cells was observed using optical microscopy (Olympus, Tokyo, Japan). Secondary antibodies: HRP-linked anti-mouse IgG (Cell Signaling Technology, Beverly, MA); HRP-linked anti-rabbit IgG (Cell Signaling Technology).
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9

Histological Analysis of Mouse Liver

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Mouse liver tissues were fixed in 4% paraformaldehyde for 24 h and embedded in paraffin. Serial sections (4 μm) were cut, deparaffinized, hydrated, and stained with hematoxylin and eosin (H&E). All stained specimens were observed and photographed by optical microscopy (Olympus, Tokyo, Japan).
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10

Morphological Analysis of Honeycomb Substrates

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The morphologies of the prepared
honeycomb substrates were imaged on a FlexSEM 1000 (Hitachi, Japan).
The honeycomb films were also submitted to optical microscopy (Olympus,
China) using optical transmission mode. The WCAs of patterned surfaces
were measured on OCA 10 (DataPhysics, Germany), and the measurements
were then recorded along and against the stretching orientation using
4 μL of water droplets for each test. All fluorescent images
were obtained using an inverted fluorescence microscope (DMi 8, Leica,
Germany) under optical reflection mode.
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