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Pnpp substrate

Manufactured by Thermo Fisher Scientific
Sourced in United States, United Kingdom

PNPP (p-Nitrophenyl Phosphate) substrate is a colorimetric substrate used in biochemical assays, particularly enzyme-linked immunosorbent assays (ELISA). It is a chromogenic substrate that, when cleaved by the enzyme alkaline phosphatase, produces a yellow color that can be measured spectrophotometrically. This provides a quantitative measure of the enzyme activity or the presence of a target analyte in the sample.

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7 protocols using pnpp substrate

1

Avidity Index Determination by ELISA

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384-well plate wells (Thermo Scientific™, Waltham, MA, USA) were coated overnight with optimized concentration of antigens. Samples were serially diluted in ELISA diluent buffer and 15 μL of serially diluted samples were added to wells in duplicate (control vs. treated), followed by 2 h incubation at room temperature. 1.5 M NaSCN (Sigma, St. Louis, MO, USA, diluted in PBS) was added to treated wells at 20 μL/well, while ELISA diluent buffer was added to control wells. The samples were then incubated for 15 m at room temperature. Wells were washed 6x and dried. Bound Abs were detected using AP-conjugated mouse anti-human IgG MT78 (MabTech, Cincinnati, OH, USA), incubated for 2 h at room temperature. The reaction was developed using pNPP substrate (Thermo Scientific™, Waltham, MA, USA) and signal was acquired at 405 nm. Readout is expressed proportion of signal from NaSCN-treated wells over control wells of a serially diluted sample and denoted as avidity index [55 (link)].
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2

Quantifying Chicken IgA Antibodies

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Ninety-six-well plates were coated with 0.25 μg/ml unlabeled mouse anti-chicken IgA (i.e., total IgA; H+L, ThermoFisher) overnight at 4°C. CON and SPORE SISs were diluted 1:1 in SEA blocking buffer (ThermoFisher), serially diluted 1:2, and incubated for 1 h at RT. Goat-anti-chicken-IgA-AP (H+L, ThermoFisher) was added, followed by PNPP substrate (ThermoFisher), and absorbance was measured at 405 nm. To measure antibody titer, the reciprocal of the highest dilution values doubling the control value (i.e., CON birds) were considered positive. ELISAs were done in duplicate per individual bird (n = 7 per group per time point) and independently-replicated twice.
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3

Alkaline Phosphatase and Viability Assay

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Alkaline phosphatase activity in 10μg of whole cell lysate was determined by addition of PNPP substrate (ThermoFisher Scientific, Loughborough UK) and measurement of absorbance at 405nM. Total viable cell number change was determined by plating cells at 1, 2 or 5 x 103 per well in duplicate 96-well plates, addition of MTS reagent (Promega, Southampton UK) at 24hr or 48hr time points and calculation of 490nM absorbance differences over time (following 630nM background correction).
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4

Measurement of TDI-specific IgG and IgE

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TDI-specific IgG and IgE levels in serum samples from each worker at baseline, 6-, and 12-months post-employment were measured using previously described enzyme-linked immunosorbent assays (ELISA) [Ye, et al. 2006 (link)]. Briefly, TDI-albumin conjugates (10 μg/ml) prepared by mixed phase (vapor/liquid) exposure methods were used to coat 96-well NUNC Maxisorp ELISA plates (Thermo Fisher Scientific Inc., Waltham, MA), followed by blocking with 3% dry milk in phosphate buffered saline (PBS). Workers’ sera were diluted in 3% milk + PBS + 0.05% Tween 20 and TDI-specific IgG was detected with horseradish peroxidase linked anti-human IgG antibodies from Pharmingen (San Jose, CA), and expressed as an end-titer. For detecting TDI-specific IgE, plates were developed with biotinylated goat anti-human IgE (Bethyl; Montgomery, TX) followed by alkaline phosphatase conjugated streptavidin, and pNPP substrate from Thermo Fisher Scientific Inc.
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5

Recombinant Protein Expression and Quantification

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rPfs16 was expressed on a small scale, and the medium and lysate were separated as described above. Samples were taken at 72 h and 96 h postinfection with the recombinant baculovirus. A flat-bottom 96-well plate (Brand) was used to coat equal concentrations of 3 mg/ml protein from either lysate or medium in triplicates at room temperature (RT) for 1 h. The wells were blocked with 2% BSA in 1× PBS and 0.1% Tween-20 (PBST) for 1.5 h at RT. The wells were then incubated with anti-His mAb at 1:1000 dilution in 2% BSA for 1 h at RT. Following three washes with 1× PBST, the wells were incubated with alkaline phosphatase–conjugated anti-mouse secondary antibody at 1:10,000 dilution in 2% BSA for 30 min at RT. After washing with 1× PBST three times, ready-made pNPP substrate (Thermo Fisher Scientific) was added and incubated for 1 h at 37 °C protected from light. Post incubation, the plate was directly read at A405 with the Synergy H1 microplate reader (BioTek).
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6

Quantification of LCMV-Specific Antibodies

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The LCMV Armstrong (LCMVARM) strain was kindly provided by R. Ahmed (Emory University, Atlanta, GA). Virus was grown in BHK-21 cells and titres (PFU) in the supernatant were determined as described before58 (link). For acute viral infections, mice were injected intraperitoneally with 2 × 105 PFU of LCMVARM and analysed 10 days after infection18 (link)58 (link). LCMV-specific antibodies in the sera of mice were measured as described before18 (link)58 (link). Briefly, lysates of LCMV-infected BHK-21 cells were used as substrate and LCMV-specific IgG and IgM binding was detected in serial dilutions of serum using AP-conjugated goat-anti-mouse IgG or IgM antibodies (both Southern Biotech). Enzyme-linked immunosorbent assays (ELISAs) were developed with pNPP substrate (Thermo Scientific; cat. no. 37621) and absorbance was analysed at 405 nm using a SpectraMax M5 microplate reader (Molecular Devices).
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7

Immunogenic Bacterial Factors Elicit IgA Responses

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Ninety-six-well plates were coated with 2.0 μg/ml of lipopolysaccharide (LPS, Salmonella enterica serovar Typhimurium, Sigma), salmochelin receptor (IroN), aerobactin receptor (IutA), or 0.25 μg/ml unlabeled chicken IgA (i.e., total IgA; H+L, Thermo Fisher Scientific) overnight at 4°C. LPS is common in gram-negative bacteria, and IroN and IutA are virulence factors involved in iron acquisition. Recombinant IroN and IutA proteins were purified from culture of E. coli BL21 containing the pET-101/D-TOPO vectors (Invitrogen) carrying iroN or iutA genes as previously described (Mellata et al., 2016 (link)). SISs were diluted 1:1 in SEA blocking buffer (Thermo Fisher Scientific), serially diluted 1:2, and incubated for 1 h at room temperature. Goat-anti-chicken-IgA-AP (H+L, Thermo Fisher Scientific) was added, followed by PNPP substrate (Thermo Fisher Scientific), and absorbance was measured at 405 nm. To measure antibody titer, the reciprocal of the highest dilution values doubling the control value (i.e., CON birds) were considered positive. ELISAs were done in duplicate per individual bird and independently replicated twice.
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