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5 protocols using mertk

1

Immunoblotting and Flow Cytometry Antibody Panel

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Antibodies to Cbl-b (#9498), Granzyme B (#17215), perforin (#62550) and Mertk (#4319) for immunoblotting analysis were purchased from Cell Signaling Technology (CST) and p-Mertk (#ab14921) from Abcam. An antibody to β-actin (#MAB1501R) for immunoblotting analysis was purchased from Millipore-Sigma. For flow cytometric analysis, the anti-hCD56-APC antibody (#B46024) was purchased from Beckman Coulter, anti-hCD3 (#130-113-134) and anti-hIFN-γ (#130-113-493) from Miltenyi Biotec, and anti-hTyro3 (FAB859P), anti-hAxl (#FAB154P) and anti-hMertk (FAB8912P) from R&D. The scrambled and Cbl-b-specific Accell siRNAs were purchased from Dharmacon. Recombinant human IL-2 and IL-15 proteins were obtained from National Institutes of Health (NIH). Recombinant human IL-7, IL-12, IL-18 and IL-21 were purchased from Miltenyi Biotec.
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2

Western Blot Analysis of Tumor Lysates

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Whole cell lysates from tumors (12 ) or cell lines were prepared as previously described (11 (link)) and detailed in Suppl. Methods. Proteins were detected with the following antibodies: H3K27me3, H3K36me3, Histone H3, MYCN, MERTK, phospho ERK (all from Cell Signaling Technology) or β-actin (Sigma-Aldrich, #A2228).
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3

Immunoblotting Analysis of Cellular Proteins

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Cell lysates were prepared and immunoblotting was carried out as previously described.13 (link) Anti-TYRO3 (Ref. 5585), AXL (Ref. 8661), MERTK (Ref. 4319), caspase-8 (Ref. 9746), cleaved caspase-3 (Ref. 9664), cleaved PARP (Ref. 5625), FOXM1 (Ref. 5436), pRB (Ref. 9309), phospho-pRB Ser780 (Ref. 9307), CYCLIN D1 (Ref. 2926), AURORA A (Ref. 14475), AURORA B (Ref. 3094), SURVIVIN (Ref. 2808), c-MYC (Ref. 9402), anti-mouse IgG, HRP-linked (Ref. 7076) and anti-rabbit IgG, HRP-linked (Ref. 7074) antibodies were purchased from Cell Signaling Technology (Ozyme, Montigny-le-Bretonneux, France). Anti-α-TUBULIN (Ref. T6199) and anti-β-ACTIN (Ref. A2228) antibodies were obtained from Sigma-Aldrich. For peptide-N-glycosidase F (PNGaseF), we digested 10 µg of protein with PNGaseF, according to the manufacturer’s instructions (New England Biolabs, Evry, France).
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Immunofluorescence Assays of RPE Cell Markers

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The immunofluorescence assays were performed as previously described in Feng et al. (64 (link)). HsRPE cells were fixed with 4% paraformaldehyde for 15 min, followed by blocking with 5% BSA at room temperature for 1 h. The cell samples were incubated with RPE65 (Abcam, ab235950), F-actin (Abcam, ab130935), CCT5 (Proteintech, 11603-1-AP), and MERTK (Cell Signaling Technology, 4319S) antibodies. Cell samples were then incubated with secondary antibodies for 1 h at room temperature. Subsequently, the nuclei of the cells were stained using DAPI for 7 min. All the images were taken using a confocal microscope (Carle ZEISS LSM 980, Oberkohen, Germany).
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5

Western Blot Analysis of Receptor Tyrosine Kinases

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Proteins were separated on an 8% SDS/PAGE gel and transferred onto a PVDF membrane. After blocking with 5% bovine serum albumin (BSA; Bio‐Rad, Hercules, CA, USA) for 1 h at room temperature, membranes were incubated with primary antibodies at 4 °C overnight. Antibody against GAPDH was purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Antibodies against AXL, p‐AXL, TYRO3, MERTK, EGFR, p‐EGFR, MET, p‐MET, p‐AKT, p‐ERK, and ERK were purchased from Cell Signaling Technology (Danvers, MA, USA). Antibody against AKT was purchased from GeneTex Inc. (Irvine, CA, USA). The membranes were then incubated with horseradish peroxidase‐conjugated secondary antibodies, and proteins were detected using ECL reagents (GE Healthcare Life Sciences, Piscataway, NJ, USA).
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