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Tof tof tm 5800

Manufactured by AB Sciex
Sourced in United States

The TOF/TOF TM 5800 is a high-performance mass spectrometer designed for accurate and sensitive analysis of complex samples. It utilizes tandem time-of-flight (TOF/TOF) technology to provide precise molecular weight determination and structural elucidation of a wide range of analytes.

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2 protocols using tof tof tm 5800

1

Constructing and Purifying SCP-Tagged BPTI Variants

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The SCP‐tagged BPTI variants were constructed by introducing the SCP‐tags to either the N or C termini of BPTI‐19A, a simplified BPTI variant [22] containing 19 alanines out of its 58 residues [23] (Fig. 1). BPTI variants were named according to the number and type of amino acids added to the N or C terminus of BPTI‐19A. The DNA sequences encoding the SCP‐tags were added by QuikChange site‐directed mutagenesis (Stratagene, California, USA) using pMMHa BPTI‐19A vector as a template [23], and the plasmid sequences were confirmed by DNA sequencing. The tagged variants were expressed in Escherichia coli BL21 (DE3) pLysS cell lines as inclusion bodies and were solubilized in 6 M GuHCl with overnight oxidation at 25 °C. CNBr (cyanogen bromide) reaction was then performed in order to cleave the TrpΔLE leader sequence, and proteins were purified by pI precipitation followed by reverse phase HPLC [18]. Furthermore, protein identities were confirmed by MALDI‐TOF mass spectrometry (AB SCIEX TOF/TOF TM 5800, Framingham, USA), and the purified proteins were preserved at −30 °C as lyophilized powders. A schematic representation of protein purification is given in Fig. S4.
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2

Purification and Mass Spectrometry of cTnI

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BCG823 cells (50 × 106) were lysed using NP-40 lysis buffer and the lysate was coupled with 10 mg of cTnImAb1 and CNBr-activated Sepharose 4B beads (2 ml) and processed as described above (Purification of human cTnIAAb). The sample was washed with glycine (pH 3.0, 0.1 M), and then the eluate was centrifuged using Amicon Mltra-15 Centrifugal Filter 10 K Device (Millipore, USA) to obtain concentrated protein. The concentrated protein was subjected to SDS-PAGE followed by Coomassie blue staining. The visualized protein band was cut, trypsin-digested, and analyzed by mass spectrometry (AB SCIEX TOF/TOFTM 5800, USA). The obtained peptide sequence was analyzed against human libraries and the peptide fingerprint database. Proteomic analysis was carried out at the Fudan University Protein Center (Shanghai, China).
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