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10 protocols using fluorescein isothiocyanate (fitc)

1

Immunofluorescence Staining of Adipose Tissue

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Fresh tissue specimens, which were embedded in OCT compound and frozen in acetone-dry ice mixture, were cut at a thickness of 3 μm on a cryostat. The frozen sections were fixed in 1:1 of acetone and methanol, and then blocked with 10% goat serum in 0.01 mol/L phosphate-buffered saline.
Staining of CD31, ADPN, AdipoR1, AdipoR2, and T-cadherin (cadherin-13) was performed by indirect immunofluorescence using the primary monoclonal or polyclonal antibodies listed in S1 Table.
Anti-mouse, rabbit, or goat IgG polyclonal antibodies conjugated with fluorescein isothiocyanate (MP Biomedicals), Alexa Fluor 455, or Alexa Fluor 488 (Thermo Fisher Scientific) were used as secondary antibodies, and their signals were visualized using a BX51/DP71 fluorescence microscope/CCD camera (Olympus).
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2

Preparation of Lipopolysaccharide-Containing Liposomes

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Sterile deionized water was used in making all buffers. Dimethyl sulfoxide (DMSO), ammonium chloride, span-60, cholesterol, lipopolysaccharide (LPS), sodium bicarbonate, sodium phosphate monobasic, and sodium phosphate dibasic were purchased from Sigma-Aldrich Co. (St Louis, MO, USA). L-glutamine, urea, and sodium chloride (NaCl) were purchased from Amresco (Solon, OH, USA). Isopropyl β-D-thiogalactopyranoside (IPTG) was purchased from HiMedia (Mumbai, India). HEPES, streptomycin, and ampicillin were purchased from USB (Cleveland, OH, USA), and chloroform was purchased from Thermo Fisher Scientific (Waltham, MA, USA). Fluorescein isothiocyanate (FITC) was purchased from MP Biomedicals (Solon, OH, USA). Nickel-nitrilotriacetic acid was purchased from Qiagen (Hilden, Germany). Brad-ford reagent was purchased from Bio-Rad Laboratories Inc. (Hercules, CA, USA). Tissue culture plate and micro-bicinchoninic acid (BCA) assay kit were purchased from Thermo Fisher Scientific. Fetal bovine serum (FBS) was purchased from Gibco® (Thermo Fisher Scientific). Horseradish peroxidase (HRP)-conjugated anti-mouse IgG, IgG1, and IgG2a were purchased from Santa Cruz Biotechnology Inc. (Dallas, TX, USA). 3,3′,5,5′-Tetramethylbenzidine (TMB) substrate was purchased from BD Biosciences Pharmingen (San Diego, CA, USA).
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3

Synthesis and Characterization of Aluminum Hydroxide Adjuvants

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The preparation of aluminum hydroxide was done following the protocol reported previously (Reithofer et al., 2020 (link)). In brief, 5% NaOH and 5% Al2(SO4)3 were sterilized by passing through a 0.22-μm filter. After being heated at 60°C for 30 min, two volumes of 5% NaOH and five volumes of 5% Al2(SO4)3 were mixed with stirring, followed by centrifugation at 10,000 g for 5 min. After being washed twice with sterile phosphate-buffered saline (PBS), the mixture was suspended in L-15 medium (HyClone, Logan, UT, USA) to give 8 mg ml−1. For fluorescence-dyed Alum formulation, a total of 10 mg of fluorescein isothiocyanate (FITC) (MP Biomedicals, Solon, OH, USA) was added to Alum suspension and incubated for 24 h in the dark at room temperature on a rotator. Free FITC was removed from FITC-Alum by 12,000 g of centrifugation for 10 min and then washed 10 times or until no fluorescence was present in the supernatant. The pellets were resuspended in PBS and used to stimulate peritoneal cells. For OVA/Alum formulation, Alum was mixed with an equal volume of 10 mg ml−1 of OVA (grade V; Sigma, Poole, UK) and incubated at room temperature for 20 min. After centrifugation at 14,000 g for 10 min, sedimented OVA/Alum was resuspended in PBS. For OVA/oil formulation, OVA was emulsified with Freund’s incomplete adjuvant (FIA; Sigma, St. Louis, MO, USA) at equal volume.
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Chitosan Hydrogels and Alginate Microparticles

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Unless stated otherwise, all materials were purchased from Sigma (St. Louis, MO, USA). Chitosan (low molecular weight, 50,000-190,000 Da based on viscosity, Sigma Product #448869), acetic acid 99.7%, and glutaraldehyde (GA) solution 25% were used for the preparation of the Chitosan hydrogels. Alginic acid sodium salt from brown algae (low viscosity 4-12cP), sodium bicarbonate, and calcium chloride were used for the elaboration of microparticles. Fluorescein isothiocyanate (FITC) and Bovine Serum Albumin (BSA)-FITC (BSA-FITC) were purchased from MP Biomedicals (Solon, OH, USA) and used for evaluation of in vitro release. Volumex (Iodine-131 (131I) Human Serum Albumin (HSA)) was purchased from Daxor Corporation (New York, NY, USA). Doxorubicin and temozolomide (TMZ) were purchased from Selleckchem (Houston, Tx, USA). Corning Matrigel Basement Membrane Matrix Growth Factor Reduced (Corning, New York, NY, USA) was prepared following manufacturer instructions for in vivo implantation.
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5

Immunohistochemical Visualization of Integrin and Antioxidant Proteins

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Immunohistochemistry was performed as previously described (6 (link), 18 (link)). Embryos were fixed in 3.7% formaldehyde in Ca2+- and Mg2+-free Dulbecco's phosphate-buffered saline (D-PBS) at room temperature for 30 min, permeabilized in 0.25% Tween-20 in D-PBS for 5 min, and incubated overnight at 4°C with primary antibodies specific for integrin α5β1 (Merck), GPx1, and GPx4 (both from Proteintech Group). After several washes, the embryos were incubated with secondary antibodies labeled with fluorescein isothiocyanate (FITC) (MP Biomedicals) or Alexa Fluor 594 (Thermo Fisher Scientific) to visualize specific antigens. Nuclei were labeled with 5 µg/mL Hoechst 33342 (bisBenzimide H33342 trihydrochloride, Thermo Fisher Scientific) for 30 min at room temperature.
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6

Antibody Staining of Drosophila Embryos

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The following antibodies were used BP102 (mouse, 1∶1000; kindly provided by Professor Nipam Patel), anti- γH2Av (1∶1000; kindly provided by Kim McKim) and anti-HRP coupled to FITC (goat, 1∶500, MPbio). Embryos were stained as fillets as previously described [34] (link). All antibodies are used for routine stains in Drosophila embryonic research and their staining pattern has been well described [49] (link)
[31] (link)
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7

Complement Deposition Assay Protocol

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Complement deposition was performed as described before (45 (link)). In brief, biotinylated antigens were coupled to fluorescent neutravidin beads (Thermo Fisher) and incubated with 10 μl of 1:10 diluted plasma. Beads were incubated with guinea pig complement in GVB++ buffer (Boston BioProducts, MA, USA) for 20 min at 37°C. Deposited C3 on beads was stained with anti-guinea pig C3 antibody labeled with fluorescein isothiocyanate (FITC) (MP Biomedicals, CA, USA) and analyzed by flow cytometry on a LSRII instrument (BD Biosciences, CA, USA).
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8

Protein Purification and Characterization

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All buffers were prepared in sterile deionised water. Ni-NTA was purchased from Qiagen, Hilden, Germany. Luria-Bertani (LB) was purchased from Difco, MA, USA Ammonium chloride, Span 60, cholesterol, LPS, sodium bicarbonate, sodium phosphate monobasic, and sodium phosphate dibasic was purchased from Sigma Aldrich, St. Louis, MO, USA. L-glutamine, urea, and sodium chloride (NaCl) were purchased from Amresco, OH, USA. Isopropyl β-D-thiogalactopyranoside (IPTG) was purchased from Hi-media. HEPES, streptomycin and ampicillin were purchased from USB, OH, USA. Chloroform was purchased from Fischer scientific, MA, USA. FITC was purchased from MP Biomedicals, CA, USA. Bradford reagent was purchased from Biorad, CA, USA. The tissue culture plate and micro BCA kit were purchased from Thermo Fisher Scientific, Waltham, Massachusetts MA, USA. FBS was purchased from Gibco, MA, USA. HRP-conjugated anti mouse IgG, IgG1, and IgG2a were purchased from Santa Cruz Biotechnology, TX, USA. TMB substrate was purchased from BD Biosciences Pharmingen, NJ, USA.
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9

In Vitro Phagocytosis of Staphylococcus

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To initiate in vitro phagocytic reaction, a bacterial suspension (Staphylococcus sp., strain 636, previously isolated from marine aquatic organisms and stored at −85 °C in the bacterial cultures collection at the A.V. Zhirmunsky National Scientific Center of Marine Biology) stained with a 0.01% solution of fluorescein-5-isothiocyanate (FITC, MP Biomedicals, Santa Ana, CA, USA) was added to the slides with adherent hemocytes at a rate of 15–20 bacterial cells per hemocyte. Reaction was stopped 1 h 20 min after the addition of bacteria by fixation in 4% PFA for 1 h at RT. Than slides were observed under a Axio Imager A1 fluorescence microscope (Zeiss, Germany). Phagocytic activity was calculated as a percentage of hemocytes containing bacteria per 200 hemocytes; the phagocytic index was calculated as the average number of bacteria within one hemocyte. The percentage of hemocytes containing microalgae (per 200 hemocytes) and the average number of microalgae within one hemocyte were also calculated.
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10

Fluorescent Labeling for Film Degradation

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To determine the degradation of the film, CS was labeled by fluorescein isothiocyanate (FITC, MP Biomedicals) while the siRNA was labeled with cyanine 5 (Thermo Fisher Scientific, Waltham, MA, USA). Samples were exposed to phosphate-buffered saline (PBS) at 37°C. After incubation for 0, 1, 3, and 5 days, the sample was examined by fluorescence microscope (Olympus Corporation, Tokyo, Japan).
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