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Positive and negative ion calibration solutions

Manufactured by Thermo Fisher Scientific

Positive and negative ion calibration solutions are reference standards used to calibrate and validate the performance of mass spectrometry instruments. These solutions contain known concentrations of positive and negative ions, allowing users to accurately measure the mass-to-charge ratios of analytes in samples.

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5 protocols using positive and negative ion calibration solutions

1

UHPLC-HRMS Metabolite Profiling Protocol

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LC–MS was performed on the Thermo Fisher Scientific Vanquish UHPLC system coupled with a Thermo Q Exactive HF hybrid quadrupole-orbitrap high-resolution mass spectrometer equipped with a HESI ion source. Metabolites were separated using a water−acetonitrile gradient on an Agilent Zorbax Eclipse XDB-C18 column (150 mm × 2.1 mm, particle size 1.8 μm) maintained at 40 °C (solvent A: 0.1% formic acid in water; solvent B: 0.1% formic acid in acetonitrile). The A/B gradient started at 1% B for 3 min after injection and increased linearly to 100% B at 20 min, then 100% B for 5 min, and down to 1% B for 3 min at a flow rate of 0.5 ml min−1. MS parameters were as follows: spray voltage, 3.5 kV; capillary temperature, 380 °C; probe heater temperature, 400 °C; 60 sheath flow rate, 20 auxiliary flow rate, and one spare gas; S-lens RF level, 50; resolution, 240,000; AGC target, 3 × 106. The instrument was calibrated weekly with positive and negative ion calibration solutions (Thermo Fisher Scientific). Each sample was analysed in negative and positive ionization modes using an m/z range of 100 to 800. Data were collected using Thermo Fisher Scientific Xcalibur software (v.4.1.31.9) and quantified by integration in Excalibur Quan Browser (v.4.1.31.9).
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2

TB Biomarker Discovery via Mass Spectrometry

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Samples were introduced to an LTQ orbitrap mass spectrometer (Thermo Fisher Scientific) via electrospray ionization by direct infusion (flow rate: 3 µL/min). Positive and negative ion calibration solutions (Thermo Fisher Scientific) were used for ion source optimization and mass accuracy test. For initial data acquisition, a resolving power of 60, 000 at 200 m/z was used for both positive and negative ions in the mass range of 200−2000 m/z. For positive ion mode data collection, we included 19 TB subjects and 14 non-TB subjects. For negative ion mode data collection, we included 18 TB subjects and 17 non-TB subjects.
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3

High-Resolution Metabolomic Analysis of Ascarosides

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High resolution LC-MS analysis was performed on a Dionex 3000 UPLC coupled with a Thermo Q Exactive high-resolution mass spectrometer equipped with a HESI ion source as described previously.29 (link) Metabolites were separated using water–acetonitrile gradient on Agilent Zorbax Eclipse XDB-C18 column (150 mm × 2.1 mm, particle size 1.8 μm) maintained at 40 °C. Solvent A: 0.1% formic acid in water; Solvent B: 0.1% formic acid in acetonitrile. A/B gradient started at 5% B for 5 min after injection and increased linearly to 100% B at 12.5 min, using a flow rate 0.5 ml/min. Mass spectrometer parameters: spray voltage 2.9 kV, capillary temperature 320 °C, prober heater temperature 300 °C; sheath, auxiliary, and spare gas 70, 2, and 0, respectively; S-lens RF level 55, resolution 140,000 at m/z 200, AGC target 1·106. The instrument was calibrated daily with positive and negative ion calibration solutions (Thermo-Fisher). Each sample was analyzed in negative and positive modes with m/z range 200 to 1000. We used peaks of known abundant ascarosides (such as ascr#1 and ascr#3) to monitor mass accuracy, chromatographic peak shape, and instrument sensitivity for each batch of samples.
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4

High-Resolution LC-MS Analysis of Betaine

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High-resolution LC−MS analysis was performed on a ThermoFisher Scientific Vanquish Horizon UHPLC System coupled with a Thermo Q Exactive HF hybrid quadrupole-orbitrap high-resolution mass spectrometer equipped with a HESI ion source. 1 μL extract was injected and separated using a water-acetonitrile gradient on an Agilent Zorbax Hilic Plus column (150 mm × 2.1 mm, particle size 1.8 μm) maintained at 40°C with a flow rate 0.3 mL/min. HPLC grade solvents were purchased from Fisher Scientific. Solvent A: 0.1% formic acid in water; Solvent B: 0.1% formic acid in acetonitrile. Analytes were separated using a gradient profile as follows: 2 min (95% B) → 20 min (50% B) → 22 min (10% B) → 25 min (10% B) → 27 min (95% B) →30 min (95% B). Mass spectrometer parameters: spray voltage 3.0 kV, capillary temperature 380°C, prober heater temperature 300°C; sheath, auxiliary, and spare gas 60, 20, and 2, respectively; S-lens RF level 50, resolution 240,000 at m/z 200, AGC target 3 × 106. The instrument was calibrated with positive and negative ion calibration solutions (ThermoFisher). Each sample was analyzed in positive and negative modes with m/z range 100–700. As a reference for betaine, betaine hydrochloride was purchased from Sigma-Aldrich. HRMS (ESI) m/z: calculated for C5H12NO2+, [M + H]+: 118.0863, found: 118.0860.
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5

High-Resolution LC-MS Metabolomics Analysis

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LC−MS was performed on a Thermo Fisher Scientific Vanquish UHPLC system coupled with a Thermo Q-Exactive HF hybrid quadrupole-orbitrap high-resolution mass spectrometer equipped with a HESI ion source. Mass spectrometer parameters were used as spray voltage 3.5 kV, capillary temperature 380 °C, probe heater temperature 400 °C; 60 sheath flow rate, 20 auxiliary flow rate, and one spare gas; S-lens RF level 50, resolution 240,000, AGC target 3 × 106. The instrument was calibrated weekly with positive and negative ion calibration solutions (Thermo Fisher). Each sample was analyzed in negative and positive ionization modes using an m/z range of 100 to 800.
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