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73 protocols using ammonium persulphate

1

Synthesis of Thiophene Derivatives

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Thiophene (purity ≥ 99%), ammonium persulphate (purity ˃ 98%), and methanol (purity 99.5%), ethanol (purity 95%) were purchased from Sigma-Aldrich (St. Louis, MO, USA). Acetonitrile (purity ˃ 99.5%), was purchased from Samchun (Seoul, Korea). All the materials and reagents were of analytical grade, and were used as received, without any further purification.
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2

Enzymatic Synthesis of Trehalulose

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The standard sugars, namely, glucose, fructose, trehalose, and maltose monohydrate, were procured from Sigma-Aldrich (USA). Trehalulose was purchased from Carbosynth Ltd. (UK). Luria-Bertani broth, Luria-Bertani agar, yeast extract, peptone, malt extract, Coomassie blue, imidazole, Tris base, and sucrose were purchased from HiMedia (India). The restriction enzymes and molecular biology kits were procured from New England BioLabs (NEB; USA) and Thermo-Fischer Scientific (USA). The pJET1.2 cloning vector and DNA and protein ladders were obtained from Thermo-Fisher Scientific. The expression vector (pET28a) and host Escherichia coli BL21(DE3) were procured from Novagen. Ammonium persulphate, sodium acetate, sodium chloride, and isopropyl β-d-1-thiogalactopyranoside (IPTG) were purchased from Sigma-Aldrich. The nickel-chelating nitrilotriacetic acid (Ni-NTA) agarose gel was procured from Qiagen (Germany). Unrefined and partially refined sugars like muscovado, jaggery, and table sugar were procured from the local market. Sugarcane molasses was purchased from Saraswati Sugar Mills Ltd., Yamuna Nagar, Haryana, India. All the solvents for TLC and HPLC analyses were procured from CDH (India).
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3

Tissue-mimetic hydrogels with tunable stiffness

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The tissue-mimetic hydrogels were prepared as follows: Acrylamide, N, N methylene-bis-Acrylamide, ammonium persulphate (APS) and N, N, N′, N′-tetramethyl -ethylenediamine (TEMED) were purchased from Sigma-Aldrich. A solution containing Acrylamide monomers, crosslinker N, N methylene-bis-Acrylamide, ammonium persulphate and N, N, N′, N′- tetramethylethylenediamine (TEMED) was prepared. Then various concentrations of GNRs dispersed in PBS were added to the prepared solution and mixed thoroughly. The prepared solution was poured inside a micromachined glass mold to make the desired thickness (300 μm) of the PolyAcrylamide (PAAm) hydrogels. Hydrogels with different stiffness were prepared to investigate the effect of the stiffness on the heat generation. The ratio of Acrylamide%: bis-Acrylamide% was varied (6:0.06, 10:0.1 and 10:0.3) in the process of gel making to adjust the hydrogel stiffness and porosity as reported elsewhere70 (link),71 (link).
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4

Graphene Transfer and Characterization

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The bromine-doped graphene was transferred on to standard lacey carbon Cu TEM grids for TEM and HRTEM studies. For that purpose, first the copper substrate was spin-coated with a PMMA solution in ethyl acetate, followed by its etching in 0.5 molar aqueous solution of ammonium persulphate (Sigma Aldrich, purity ≥ 98%) for ∼100 minutes. Thereafter it was rinsed thoroughly in deionized water. The film was then fished in deionized water onto a standard lacey carbon Cu TEM grid. The PMMA coating was removed in hot acetone vapor.25 (link) Finally, to remove any organic residue that might have lifted, the TEM grid was annealed in high vacuum (10−6 mbar) at 200 °C for 12 hours.26 (link)For SEM and Raman characterizations, instead of a TEM grid SiO2 (300 nm)/Si wafer was used as the substrate for transfer. The wafer was sonicated in pure acetone followed by washing in absolute ethanol and then drying in N2. The graphene film was fished onto it and then annealed in an oven at 75 °C for 20 minutes. Afterwards, PMMA was removed by dipping it (for 2 minutes) in pure acetone.
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5

Protein Purification and Analysis

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Polyethylene glycol (PEG 6000), ammonium sulphate, sodium chloride, lysozyme, horse radish peroxidase, α-chymotrypsinogen A, acrylamide, ovalbumin, bovine serum albumin, N,N,N1,N1-tetramethylethylenediamine (TEMED), ammonium persulphate, sodium dodecyl sulphate (SDS), Coomassie brilliant blue R-250, sodium alginate, glutaraldehyde and 3,4-dihydroxyphenyl-L-alanine (L-DOPA), were obtained from Sigma Chemical Company, St Louis, USA. Protein markers for SDS-PAGE were obtained from Carl Roth, Karlsruhe, Germany. Sephadex G-100 was obtained from GE Healthcare Bio-sciences (GHB), Uppsala, Sweden. Other reagents used were of analytical grade.
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6

Synthesis of Acrylamide-Based Hydrogels

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The monomer acrylamide, AAm, initiator Ammonium Persulphate, APS, and crosslinkers—N,N′-methylene-bis(acrylamide), MBA, and Poly(Ethylene Glycol)-Diacrylate, PEGDA (Mn = 700 g/mol), were all purchased from Sigma Aldrich. All the chemicals were used as purchased without any further purification.
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7

RecA Protein Purification and Characterization

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RecA protein from E. coli at a concentration of 2 mg/mL was obtained from New England Biolabs Inc. (Ipswich, USA). SYBR Gold Nucleic Acid Gel Stain, XapI enzyme (recognition sequence 5′…R^AATTY…3′, 10 units/μL) and 1X tango buffer containing tris acetate (TAc) (33 mM, pH 7.9), magnesium acetate (MgAc) (10 mM) potassium acetate (66 mM), and BSA (0.1 mg/mL) were purchased from Thermo Fisher Scientific Inc. (Waltham, USA). Proteinase K (>800 units/mL), ammonium persulphate, TAc, MgAc (1 M), tris-EDTA (TE) buffer (100X), N,N,N′,N′-tetramethylethylenediamine (TEMED) and acrylamide/bis-acrylamide (30%) were obtained from Sigma-Aldrich (St. Louis, USA). Synthetic oligomers were purchased from Integrated DNA Technologies (Leuven, Belgium) and were stored at a concentration of 100 μM in 1x TE buffer at −20 °C. Blue/Orange loading dye (6X) was obtained from Promega Corporation (Madison, USA).
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8

Polyoxometalate-Based Protein Electrophoresis

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Deuteriumoxide (D2O), N,N,N′,N′-tetramethylethylenediamine (TEMED), ammonium persulphate (APS), phosphotungstic acid hydrate (H3[PW12O40]·xH2O), glycine, disodium phosphate (Na2HPO4), sodiu, dodecyl sulfate (SDS), horse heart cytochrome c (Cyt c) and bromophenol blue were bought from Sigma-Aldrich. Zirconium oxychloride octahydrate and diethyl ether were purchased from ChemLab. Aqueous hydrochloric acid (37%), potassium hydrogen carbonate and ammonium ceriumIV nitrate (CAN) were obtained from Acros organics. Ethanol, sodium hydrogen carbonate, aqueous ortho-phosphoric acid (85%), diethyalaminehydrochloride and protein ladders were acquired from Thermo Fisher Scientific. MEthanol and monosodiumphosphate (NaH2PO4) were purchased from VWR. Potasium chloride, tris(hydroxymethyl)aminomethane (TRIS) and acrylamide:bisacrylamide (29:1) solution (30%) were procured from Applichem. [Ce(α-PW11O39)2]10− (CeK) was synthesized according to (Griffith et al., 2000 (link)) [Zr(α-PW11O39)2]10− (ZrK) was synthesized following a slightly altered procedure from (Sokolov et al., 2007 (link)).
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9

Optimizing Synthetic Oily Wastewater Preparation

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Silica extracted from diatomaceous earth in our previous study was used after drying.22,23 Sodium dodecyl sulphate, 3-bromo-1,2-benzenediamine, urea and ammonium persulphate were of analytical grade and obtained from Sigma-Aldrich (St Louis, USA), NaOH and HCl was obtained from Rochelle Chemicals (Johannesburg, South Africa). Milli-Q water from Millipore S.A.S (Molsheim, France) (18.2 μs cm−1 at 25 °C) was also used in all dilutions. Tea bags were bought from Shoprite, Thohoyandou, South Africa. Vacuum pump oil was from Telstar technologies (Barcelona, Spain). Freeze dryer (Telstar Lyoquest-55, Shanghai, China) was used to freeze dry samples and spectroquant UV spectrophotometer (Merk Group, Germiston, South Africa) was used for total organic carbon measurement and Stuart reciprocating shaker (Staffordshire, UK) was used for shaking and functional group analysis was carried out using an ALPHA FT-IR spectrophotometer from Bruker Pty (Sandton, South Africa).
Synthetic oily wastewater (SOWW) was prepared by modifying the method described by Shoba et al.24 (link) Sodium dodecyl sulphate and Vacuum pump oil (90 : 1 v/w) were added to a 1 L flask and the volume made up with water. The mixture was then sonicated for 5 min at an amplitude of 75% and cycle of 0.5 to make the mixture homogenous.
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10

DMBA-Induced Carcinogenesis: Molecular Mechanisms

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7,12-dimethylbenz[a]anthracene (DMBA; CAS # 57-97-6), sesame oil (CAS # 8008-74-0), 2-β-mercaptoethanol, 30% acrylamide/0.8% bisacrylamide, ammonium persulphate, glycerol, N′N′N′N′-Tetramethylethylenediamine (TEMED), Tris base, Tris HCL, Sodium chloride, Tween-20 were purchased from Sigma-Aldrich Inc. (St Louis, MO). RNeasy Mini kit, QIA shredder kit, RNeasy Min Elute kit, and Quantitect TM SYBR Green PCR kit were purchased from Qiagen Inc (Valencia, CA). All primers were purchased from the Iowa State University DNA facility. All primary antibodies were purchased from Abcam (Cambridge, MA) with the exception of the BRCA1(C-20) primary antibody which was from Santa Cruz Biotechnology (Santa Cruz, CA). RNA later was obtained from Ambion Inc. (Austin, TX). Goat anti-mouse and anti-rabbit secondary antibodies were obtained from Santa Cruz Biotechnology (Santa Cruz, CA). Ponceau S was from Fisher Scientific. ECL plus chemical luminescence detection kit was obtained from GE Healthcare, Amersham (Buckinghamshire, UK).
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