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Flow cytometer analysis

Manufactured by Beckman Coulter
Sourced in United States, China

A flow cytometer is an instrument used to analyze the physical and chemical characteristics of particles, such as cells, within a fluid as they pass through a laser beam. It measures multiple parameters of a single particle, including its size, complexity, and fluorescence intensity. The core function of a flow cytometer is to provide quantitative analysis of these cellular properties.

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9 protocols using flow cytometer analysis

1

Isolation and Characterization of Wharton's Jelly Mesenchymal Stem Cells

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WJ-MSCs were isolated and cultured as described previously [20 (link)]. The protocol was approved by the General Logistics Department of the PLA and the Navy General Hospital Ethical Review Board. Briefly, WJ-MSCs were harvested from passage 3, washed three times with PBS, and then added 0.1–10 μg/mL of conjugated antibody (Abcam, USA) followed by a 30-min incubation in dark at room temperature before flow cytometer analysis (Beckman, USA). In total, above 95% of cells expressed CD44, CD73, CD90, and CD105, while 2% or less of cells expressed CD45, CD34, and HLA-DR. Released cells were negative for pathogenic microorganisms, HBV, HCV, HIV, cytomegalovirus, syphilis, and ALT, and endotoxin levels were found within 40 IU/L and 0.5 EU/mL, respectively. The total cells were counted, and cell viability (≥ 85%) was determined by Trypan blue staining.
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2

Imiquimod-Induced Melanocyte Apoptosis

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A total of 1 × 105 melanocytes were cultured with or without imiquimod (10 μg/ml) in polystyrene 25 cm2 flasks (Grainer) for 48 h. We collected the melanocytes by a 0.25% trypsin solution lacking ethylenediaminetetraacetic acid (EDTA) and centrifuged the cells in cold PBS during 5 min at 1000 rpm and suspended in 300 µl of cold binding buffer (Immunotech). Apoptotic melanocytes were measured using Annexin V/PI (KeyGEN). Then flow cytometer analysis (Beckman Coulter) was performed following the fabricator's guidelines.
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3

Identifying Tissue-Resident Memory T Cells

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Cell surface staining was used to detect human tissue-resident memory (TRM) T cells. The centrifuged and resuspended isolated nasal mucosa cells were added in the plate, washing, and dead cell staining steps. For the cell surface staining, surface antibody staining solution was prepared with PBS, including PerCP/Cyanine5.5 anti-human CD3 Antibody, Brilliant Violet 510™ anti-human CD8 Antibody, Alexa Fluor® 700 anti-human CD4 Antibody, PE anti-human CD69 Antibody, BV421 anti-human CD103 Antibody and Brilliant Violet 650TM anti-human CD45RO Antibody, and were added in each well and resuspended cells for 20-30 min. After washing and resuspending, the samples are ready for flow cytometer analysis (BECKMAN COULTER, Brea, CA, USA).
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4

Melatonin and 5-Fu Induce Apoptosis

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Cell apoptosis and decrease of mitochondrial transmembrane potential induced by melatonin or 5-Fu was determined by AnnexinV/PI (KeyGEN, Nanjing, China) and rhodamine (Beyotime, Shanghai, China) staining, respectively, followed by flow cytometer analysis (Beckman Coulter, California, USA) according to manufacturer's instructions. Also, caspase activity was measured by Caspase 3/7 Glo assay and Caspase 8 Glo assay (Promega, Madison, WI, USA) according to the manufacturer's protocol. The intracellular level of ROS was detected according to a previous report.42 (link)
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5

Apoptosis and Caspase Activity Assay

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Cell apoptosis was determined by AnnexinV/PI (KeyGEN, Nanjing, China), followed by flow cytometer analysis (Beckman Coulter, California, USA) according to manufacturer’s instructions.
Caspase activity was measured by Caspase-Glo 3/7 Assay kit (Promega, Madison, WI, USA) according to the manufacturer’s protocol.
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6

Apoptosis and Necrosis Evaluation in A549 and MCF-7 Cells

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Annexin V/PI assay was used to determine the apoptotic and necrotic cells. The A549 and MCF-7 cells were seeded on 6-well microplates at a density of 106 cells/mL respectively. After 24 h incubation, the cells were treated with following concentrations of 0, 5, and 10 μM for compound 1. After 24 h, they were washed and re-suspended in PBS solution (500 μL). Then, Annexin V-FITC (5 μL) and PI staining solution (5 μL) were introduced to the mixture, and the incubation process was followed under the dark condition for 5 min at 25 °C. Finally, flow cytometer analysis (Beckman Coulter®, Miami, FL, USA) was performed using an AnnexinV-FITC Apoptosis Detection Kit (Strong Biotech Corporation, Taipei, Taiwan) and Flowjo version 7.6.1. Software.
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7

Cell Cycle Analysis of Activated CD4+ T Cells

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Propidium iodide (PI) staining was used to analyze DNA contents and cell cycle. Briefly, total CD4+ T cells were isolated from the MLN of naïve 6- to 8-week-old C57BL/6 mice using EasySep™ Mouse CD4+ T Cell Isolation Kit. Cells were cultured in 96-well plate at 2×105 cells/well and stimulated with anti-CD3 (1 μg/ml) plus anti-CD28 (1 μg/ml) in the absence (DMSO control) or presence of 40 mg/L DH for 24 h or 48 h. Cells neither stimulated nor treated with DH were used as control (0 h). Alternatively, total CD4+ T cells were isolated from the CLN of IRBP-immunized mice (10 days after immunization) and stimulated with IRBP-loaded BMDCs in the absence (DMSO control) or presence of DH (10, 20, and 40 mg/L) for 48 h. After surface staining with FITC-anti-CD4 antibody, cells were fixed and incubated with staining buffer containing 50 µg/ml PI and 0.25 mg/ml RNase A (Beyotime) at room temperature for 30 min. Cell cycle distribution was determined using flow cytometer analysis (Beckman Coulter). The percentages of cells in the G0/G1, S, and G2/M phases were determined using Beckman software.
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8

Annexin-V/PI Apoptosis Assay

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Cell apoptosis were determined by Annexin-V/PI (KeyGEN, Nanjing, China) staining, followed by flow cytometer analysis (Beckman Coulter, California, USA) according to the manufacturer's instructions. The experiment was triplicately repeated.
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9

Evaluating Cell Apoptosis and Cycle

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Cell apoptosis and cell cycle was evaluated by flow cytometry. Transfected cells were resuspended in binding buffer after wash with cold PBS. Suspended cells were incubated with Annexin V-FITC and propidium (PI) for 10–15 min at room temperature followed by flow cytometer analysis (Beckman, USA): AnnexinV-FITC (-) and PI (-), living cells; AnnexinV-FITC (+) and PI (-), early apoptotic cells; AnnexinV-FITC (+) and PI (+), late apoptotic cells and necrotic cells. Cells that were AnnexinV-FITC (+) /PI (-) or AnnexinV-FITC (+) /PI (+) cells were considered apoptotic cells. For cell cycle analysis, cells were fixed in 70 % ethanol at 4 °C overnight and stained with 5 µL PI for 45 min in the dark at room temperature. Then the stained cells were immediately analyzed by flow cytometry (Beckman, USA).
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