Isolation of Enterobacterales was performed by putting together 10 g of raw fish with 90 mL of saline, then a series of 10-fold dilutions were performed in agreement with standard methods for initial suspension and decimal dilutions of test samples for microbiological examination (ISO 6887-1:2017-05) [31 ]. A total of 0.1 mL of the dilution was inoculated onto violet red bile glucose (VRBG) agar and incubated for 24 h at 37 °C. In order to confirm that typical colonies belong to the order Enterobacterales, an oxidase test was performed. Additionally, 10 strains from the American Type Culture Collection (ATCC) were identified as reference strains.
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Isolation and Identification of Enterobacterales from Raw Fish and Shrimp
Isolation of Enterobacterales was performed by putting together 10 g of raw fish with 90 mL of saline, then a series of 10-fold dilutions were performed in agreement with standard methods for initial suspension and decimal dilutions of test samples for microbiological examination (ISO 6887-1:2017-05) [31 ]. A total of 0.1 mL of the dilution was inoculated onto violet red bile glucose (VRBG) agar and incubated for 24 h at 37 °C. In order to confirm that typical colonies belong to the order Enterobacterales, an oxidase test was performed. Additionally, 10 strains from the American Type Culture Collection (ATCC) were identified as reference strains.
Comprehensive Salmonella Enteritidis Strain Analysis
Poultry S. enterica ser. Enteritidis strains (n = 51) isolated from the environment of chicken broilers, turkey broilers and laying hen farms. Isolates were obtained from two veterinary laboratories: AGRO-VET Laboratory in Wroclaw and SLW BIOLAB in Ostróda. These laboratories collected strains in the period 2009–2016. For our research, strains isolated from poultry are designated as “A” or “S”.
Human S. enterica ser. Enteritidis strains (n = 44) isolated from human fecal samples were collected in the period 2015–2017 by Dialab Laboratory in Wroclaw. Strains isolated from humans are designated as “H”.
Antibiotic-Resistant Klebsiella pneumoniae Isolation
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