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7 protocols using alisertib

1

Breast Cancer Cell Line Characterization

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Human breast cancer cell lines from the American Type Culture Collection were cultured in standard conditions. We confirmed negative mycoplasma testing and STR profile for each cell line. Alisertib was purchased from MedChem Express (Monmouth Junction, NJ). FRAX1036 was synthesized by AK and WW [22 (link)].
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2

Evaluation of Selinexor, Temozolomide, and Alisertib

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The drug compounds used in this study were commercially obtained (i.e., selinexor from Selleckchem; temozolomide [TMZ] and alisertib from MedChemExpress) and resuspended as per the manufacturer's instructions for in vitro and in vivo use.
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3

Quantifying Viable Tumor Cells by MTT Assay

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MTT analysis was performed to quantify viable tumor cells in culture and to determine IC50 values after treatment with Adavivint, Alisertib, Berzosertib, Olaparib and Trametinib (all obtained from MedChemExpress, New York, USA). For dose response analyses, cells were seeded in a 96-well plate under standard culture conditions. After overnight culture, the cells were treated with a dilution series of the various inhibitors. 48 h after the initial treatment, all inhibitors were replenished and after 120 h MTT (5 mg/ml) was added to each well, followed by an incubation for 90 min at 37 °C. Subsequently, supernatants were aspirated, and precipitated formazan dye was solubilized with DMSO. Absorbance was measured at 540 nm using a Tecan infinite F50 spectrophotometer and viable tumor cells were calculated by the mean absorbance relative to DMSO control.
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4

Angiogenic Inhibitors Modulate DIPG Tumor Growth

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Alisertib (MedChemExpress, Monmouth Junction, NJ), bortezomib (MedChemExpress), panobinostat (MedChemExpress), ponatinib (MedChemExpress), MSN1-Leu (synthesized in our lab, [20 (link)]) were sterilely prepared and dissolved in 0.5% DMSO and sterile PBS. Bevacizumab (SelleckChem) is water soluble, and was directly dissolved in sterile PBS. Drugs were administered by pipetting 15μL of drug solution directly on top of (but not contacting) the CAM tumor on embryonic development day 11, 13, 15. Each experiment contained 1–5 biological replicates per treatment group (at time of ultrasound) and there were at least three experimental replicates for each drug (n = 3–24 per drug treatment). Vehicle treatments (0.5% DMSO in sterile PBS) from all drug experimental replicates were combined to form one large vehicle group for further analysis (DIPGXIIIp* n = 38, DIPGIV n = 19).
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5

Comparative Analysis of PKI with PLK4 Inhibition

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We studied 8 PKI with PLK4 cross-over potential: CFI-400945 (CAS#1338800-06-8, Cat#16850) (Cayman Chemical, Ann Arbor, MI, USA) [55 (link)]; CFI-400437 (CAS#1247000-76-5, Cat# SYN-1207) (SynKinase, San Diego, CA, USA) [60 (link)]; centrinone (CAS#1798871-30-3, Ludwig Institute for Cancer Research, New York, NY, USA) [59 (link)]; centrinone B (CAS#1798871-31-4, Ludwig Institute for Cancer Research, New York, NY, USA) [59 (link)]; KW-2449 (CAS# 1000669-72-6, Cat#HY-10339) (MedChemExpress, Monmouth Junction, NJ, USA) [63 (link)]; R1530 (CAS#882531-87-5, Cat#15225) (Cayman Chemical, Ann Arbor, MI, USA) [57 (link)]; axitinib (CAS#319460-85-0, Cat#13813) (Cayman Chemical, Ann Arbor, MI, USA) [61 (link)], and alisertib (CAS#1028486-01-2, Cat# HY-10971) (MedChemExpress, Monmouth Junction, NJ, USA) [97 (link)] (Figure 1).
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6

Cell Line Cultivation and Characterization

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Isogenic breast cancer cell lines, MCF7-WT/ RB-del were maintained in DMEM media containing 10% FBS. T47D cells were grown in RPMI media, supplemented with 10% FBS. CAMA-1 cells were purchased from ATCC and were cultured in EMEM media (Cat # 30–2003) that was supplemented with 10% FBS. All the cells lines were grown at 37 °C and 5% CO2 and were confirmed to be mycoplasma free. Cell line authentication was performed using STR analysis. Palbociclib, Alisertib, and Birinapant were purchased from MedChemExpress (NJ, USA). Mk1775 was purchased from Chemitek (IN, USA). Fulvestrant, Everolimus, and Alpelisib were purchased from SelleckChem. MK1775 was purchased from ChemiTek. All the compounds were dissolved in DMSO to a final concentration of 10 mM. A customized drug library, comprising 311 compounds was purchased from SelleckChem.
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7

Alisertib Inhibits Cancer Cell Viability

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Alisertib (name MLN8237, formula C27H20ClFN4O4, #HY-10971, Medchem Express, Sollentuna, Sweden), an orally active and selective Aurora A kinase inhibitor (IC50 = 1.2 nM), which binds to Aurora A kinase resulting in mitotic spindle abnormalities and mitotic accumulation, was dissolved in dimethyl sulfoxide (DMSO, Sigma, Darmstadt, Germany). The effect of Alisertib on CAL-120 and MDA-MB-231 cells viability was determined by a dose–response curve based on different drug concentrations of Alisertib ranging from 0.0001 µM to 20 µM, and DMSO as vehicle, for 72 h. Cell viability was measured using 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenylte-trazolium bromide (MTT) assay.
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