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2 protocols using rabbit anti ddr1

1

Western Blot Analysis of Protein Signaling

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Homogenized tumor tissue or cells were lysed in 2% SDS containing protease inhibitor cocktail (Sigma, p8340) and phosphatase inhibitor (GenDEPOT, P3200). Equal amounts of protein per sample were subjected to SDS-PAGE and transferred to a PVDF membrane. The membranes were blocked in 5% skim milk in TBST (TBS containing 0.1% Tween 20) for 30 min. Primary antibodies were incubated overnight at 4°C in 3% BSA in TBST. Membranes were incubated with horseradish peroxidase (HRP)-conjugated secondary antibodies diluted in 5% milk and TBST for 1 h at room temperature. Bands were visualized using Pierce ECL Plus Western blotting substrate (ThermoFisher 32132). Protein expression was quantified by measuring the pixel intensity of each band using ImageJ. pFAK/FAK represents the ratio of the pFAK signal to the total FAK signal of each sample.
Antibodies used were as follows: rabbit anti-DDR1 (Cell Signaling Technology, 5583), mouse anti-FAK (BD Biosciences, 610088), rabbit anti-pFAKY397 (Cell Signaling Technology, 8556), and mouse anti-β-actin (Sigma, A5441).
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2

Western Blot Quantification Protocol

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Cells extraction, lysate quantification, SDS-Page and Western blot were performed as described previously using stainfree gels [22 (link)]. Membranes were incubated with mouse anti-GAPDH (GeneTex, Irvine, CA, USA), mouse anti-pEGFR (Tyr1068, 15A2), mouse anti-BCRP (BXP-21), mouse anti-pHSP27 (Ser82, B-3), mouse anti-HSP27 (F-4), mouse anti-integrin β4 (A9), rabbit anti-ERK1/2 (Cell Signaling Technology, Frankfurt am Main, Germany), rabbit anti pERK1/2 (Thr202/Tyr204, Cell Signaling Technology) rabbit anti-DDR1 (Cell Signaling Technology), rabbit anti-pDDR1 (Tyr513, Cell Signaling Technology) as well as goat anti-rabbit and anti-mouse IgG kappa binding protein IgG HRP-conjugated diluted in 1% BSA solution. If not indicated otherwise, antibodies were purchased from Santa Cruz Biotechnology. Western blot was quantified via chemiluminescence using Clarity Western ECL substrate chemiluminescence kit (BioRad). Besides the loading control GAPDH, we used stainfree total protein normalization. Membranes were photographed and quantified using ChemiDoc XRS+ imaging acquiring system (BioRad) and Image Lab software v. 6.0 (BioRad). Representative uncut Western blots are shown in Figure S5.
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