The largest database of trusted experimental protocols

22 protocols using methocult h4034

1

Cell Counting in Methylcellulose

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells (5.0 × 104 cells/ml) were seeded into methylcellulose media (Stem Cell Technologies - MethoCult H4034). At day 10, cells were resuspended in warm RPMI and counted on a Chemometec nucleocounter.
+ Open protocol
+ Expand
2

Analyzing HSC Colony Formation

Check if the same lab product or an alternative is used in the 5 most similar protocols
To analyze the effect of the overexpression or knockdown of Pot1a on colony-forming activity, Pot1a- or shPot1a-transduced LSK cells were cultured for 1–4 weeks. After in vitro culture, GFP+ LSK cells were sorted and cultured in MethoCult™ GF M3434 medium for mouse cells and MethoCult™ H4034 for human cells (Stemcell Technologies).
To analyze the effect of MTM-POT1a on the maintenance of HSC colony formation activity, LSKCD41CD48CD150+ cells were cultured for 10 days in SF-O3 medium in the presence of 0.1% BSA, 100 ng ml–1 SCF, and 100 ng ml–1 TPO with or without MTM-POT1a. Lin cells were sorted and their ability to form colonies was then assessed. To analyze the effect of MTM-POT1a on the maintenance of HSC numbers, LT-HSCs (LSKCD41CD48CD150+ cells) were cultured for 3 weeks in SF-O3 medium in the presence of 0.1% BSA, 100 ng ml–1 SCF, and 100 ng ml–1 TPO with or without MTM-POT1a. After culture, the number of LSK cells and LT-HSCs was examined. For examination of colony formation in hCB HSCs after in vitro culture, LinCD34+CD38CD45RACD90+CD49f+ cells were cultured for 10 days in StemSpan SFEM (Stemcell Technologies) in the presence of 100 ng ml–1 SCF, 100 ng ml–1 rhFL, and 20 ng ml–1 TPO with or without MTM-POT1. After culture, Lin cells were sorted and cultured in MethoCult™ H4034 medium.
+ Open protocol
+ Expand
3

Evaluating Diarylpropionitrile Effect on L-428 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
The suspended L-428 cells (number = 2,500)were plated in culture dishes with 1 ml of semisolid methylcellulose culture medium (Methocult H4034; Stem Cell Technologies, Meylan, France) in the presence or absence of DPN 10 nM. Duplicates aliquots (1 mL) were plated in 35-mm Petri plates and incubated further at 37°C. Colonies were counted at 10 days.
+ Open protocol
+ Expand
4

Evaluating CML Stem Cell Response

Check if the same lab product or an alternative is used in the 5 most similar protocols
CD34+ CP-CML cells were seeded in SFM ± LDE225 ± nilotinib and cultured for 72 h then washed three times, inoculated at a concentration of 4 × 103/ml into methylcellulose supplemented with growth factors (Methocult H4034; Stem Cell Technologies) and cultured in duplicate for 14d prior to colony assessment. Following assessment, at least 20 colonies (granulocyte-erythroid-megakaryocyte-macrophage [GEMM] or granulocyte macrophage [GM]) colonies were plucked from each experimental arm and serially re-dispersed in Methocult with secondary and tertiary colony formation assessed after 7d intervals.
+ Open protocol
+ Expand
5

Clonogenic Assay of K562 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Human K562 cells were plated after FACS in methylcellulose MethoCult H4034 (Stem Cell Technologies). Colonies were scored after 7 days.
+ Open protocol
+ Expand
6

Clonogenic Assay for AML Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
NRD and NRI AML cells were cultured in RPMI-1640 (Lonza, Basel, Switzerland) with 10% FBS (Atlas Biologicals, Fort Collins, CO, USA) with or without 1 μg/mL doxycycline (Sigma) for 48 hours or inhibitors for 24 hours and then plated in IMDM (Lonza) with 30% FBS, 1.275% methylcellulose (R&D Systems, Minneapolis, MN, USA), and 2 ng/mL murine GM-CSF (R&D Systems). Human AML cells were treated with inhibitors for 24 hours and then plated in MethoCult H4034 (Stem Cell Technologies, Vancouver, BC, Canada). Colonies were scored after 7-14 days on an inverted microscope.
+ Open protocol
+ Expand
7

Colony-Forming Cell (CFC) Assay Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
For the colony-forming cell (CFC) assay, 3000 cells were mixed with 3 mL of Methocult® H4034 (Stem Cell Technologies). This mix was then split evenly between two 35 mm2 plates covering the entire surface of the plates. All of the plates from each sample were placed inside a 23.5 cm2 plate, and 2 plates containing just water were added to avoid the Methocult drying. The cells were cultured for no less than 9 days at 37 °C and 5% CO2 before analysis.
+ Open protocol
+ Expand
8

Clonal Analysis of Hematopoietic Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
One million peripheral blood (PB) or 2 × 105 BM cells were seeded in methylcellulose-based medium Methocult H4034 (StemCell Technologies, Meda, Italy), according to manufacturer's instructions, and plated in 6-well dishes. After 2 weeks of incubation at 37°C, 5% CO2, individual colonies were picked, washed in PBS, and lysed in 20 μL of the following buffer: 10 mM Tris-HCl, 50 mM NaCl, 6.25 mM MgCl2, 0.045% NP40, 0.45% Tween-20; pH 7.6. On average 50 colonies per sample were isolated. After adding 1 μL of 20 μg/mL proteinase K, the lysate was incubated at 56°C for 1 hour and at 95°C for 15 minutes. Subsequently, the sample was amplified using dedicated barcoded primers by PCR, and underwent deep-sequencing. For combined treatment, 2 × 105 BM-derived cells were seeded in methylcellulose-based medium in presence of phosphoethanolamine 1 mM (Merck Life Science, Milan, Italy), trametinib 10 nM (Selleck Chemicals, Rome, Italy), trametinib 100 nM and combination of them. After 2 weeks of incubation, colonies were counted. Expected additive effect of the combination viability is the product of the 2 singlet viabilities. For actionable mutations targeting, all the inhibitors used (crizotinib, dasatinib, imatinib, and ruxolitinib) were purchased from Selleck Chemicals.
+ Open protocol
+ Expand
9

G-CSF Stimulation of AML Colonies

Check if the same lab product or an alternative is used in the 5 most similar protocols
AML primary samples were treated for 18 h with G-CSF (PrepoTech) at different concentrations in complete IMDM medium and cultured in MethoCult H4034 (StemCell Technologies) for 14 days. Colonies were counted based on cellularity and morphology criteria.
+ Open protocol
+ Expand
10

Assessing AML Cell Colony Formation

Check if the same lab product or an alternative is used in the 5 most similar protocols
AML cells were diluted and seeded at about 1 × 104 cells/well in 35‐mm dishes with or without matrine (1.5 g/l) in methylcellulose medium (MethoCult™ H4034, Stemcell Technologies, Vancouver, BC, Canada). After incubation for 8 days in a 5% CO2 atmosphere incubator at 37°C, the cells were examined using an inverted microscope (Olympus, Tokyo, Japan) equipped with a CCD camera. The colony is defined to consist of at least 40 cells, and visible colonies were counted. Cells were then washed with PBS twice and counted using haemocytometer.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!