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18 protocols using compound c

1

AMPK Activation Protects Retina from NMDA Injury

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Next, we examined whether (1) the protective effect of metformin against NMDA-induced retinal injury is mediated through activation of the AMPK system, and (2) activation of AMPK protects against NMDA-induced retinal injury. In the first series of experiments, we examined the effect of compound C, an inhibitor of AMPK, on the effect of metformin on the NMDA (200 nmol)-induced retinal neuronal cell loss in the GCL. In this experiment, 18 rats were divided into three groups as follows: NMDA + vehicle (n = 6), NMDA + metformin (20 nmol) (n = 6), and NMDA + metformin (20 nmol) + compound C (10 nmol; Abcam Biochemicals, Cambridge, UK) (n = 6). NMDA, metformin, and compound C were dissolved in dimethyl sulfoxide (DMSO; Nacalai Tesque). In the second series of experiments, we examined the effect of AICAR (Tocris Bioscience), an activator of AMPK, on NMDA (200 nmol)-induced retinal neuronal cell loss in the GCL. In this experiment, 17 rats were divided into three groups as follows: NMDA + vehicle (n = 5), NMDA + AICAR (20 nmol) (n = 6), and NMDA + AICAR (50 nmol) (n = 6). AICAR was dissolved in saline.
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2

Cisplatin-induced Kidney Injury in Mice

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Male C57BL/6 mice (8–10 weeks) were purchased from the experimental animal center of Zhengzhou University (Zhengzhou, Henan). The BUMPT cell line (Boston University mouse proximal tubular cell, BUMPT-306) was originally from Drs. John Shwartz William and Lieberthal at Boston University (Bhatt et al., 2010 (link)). The primary antibodies such as anti-P53, anti-AMPK, anti-phospho-AMPK (p-AMPK), anti-cleaved PARP (c-PARP), anti–cleaved caspase-3 (c-caspase3), and anti-CHOP antibodies were from Cell Signaling Technology (1:1,000, Danvers, MA, United States); anti–phospho-(serine-15)-P53 (p-P53), and anti-phospho-(s724)-IRE1α (p-IRE1α) antibody were from Abcam (1:1,000, Cambridge, United Kingdom); anti–β-actin(1:1,000) was from Sigma-Aldrich (St. Louis, MO, United States); all secondary antibodies used for immunoblot analysis were purchased from Thermo Fisher Scientific (1:5,000, Waltham, MA, United States). Compound C and AICAR were purchased from Abcam, and cisplatin was from Sigma-Aldrich.
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3

Autophagy Regulation and Signaling Pathways

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Primary antibodies were mouse monoclonal anti-ATG12 (1:100, sc-271688, Santa Cruz Biotechnology, Santa Cruz, CA), rabbit polyclonal anti-p53 (1:1000, ab131442, Abcam, Cambridge, MA), rabbit monoclonal anti-LC3 (1:1000, #3868, Cell Signaling Technology, Beverly, MA), rabbit polyclonal anti-SQSTM1/p62 (1:1000, ab91526, Abcam), rabbit monoclonal anti-ATG5 (1:1000, #12994, Cell Signaling Technology), rabbit polyclonal anti-AMPKα (1:1000, #2532, Cell Signaling Technology), rabbit polyclonal anti-phospho-AMPKα (Thr172) (1:1000, #2531, Cell Signaling Technology), rabbit polyclonal anti-phospho-Acetyl-CoA Carboxylase (Ser79) (1:1000, #3661, Cell Signaling Technology), rabbit monoclonal anti-RhoA (1:1000, #2117, Cell Signaling Technology), rabbit polyclonal anti-phospho-RhoA (Ser188) (1:500, ab125275, Abcam), rabbit polyclonal anti-phospho-MYPT1 (Thr696) (1:1000, #5163, Cell Signaling Technology), rabbit monoclonal anti-RUNX2 (1:1000, #12556, Cell Signaling Technology) and mouse monoclonal anti-Actin (1:2000, CW0096, CWBIO, Peking, China). Secondary antibodies were goat anti rabbit IgG (1:5000, 111-035-003, Jackson ImmunoResearch, West Grove, PA) and goat anti mouse IgG (1:5000, 115-035-003, Jackson ImmunoResearch). 3-MA was purchased from Sigma (St. Louis, MO). Compound C was purchased from Abcam.
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4

Galectin-3 Regulates Osteoblast Differentiation

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The Dulbecco’s Modified Eagle’s Medium (DMEM), fetal bovine serum (FBS) and penicillin/streptomycin were purchased from Gibco (Carlsbad, CA, USA). Galectin-3 and compound C (AMPK inhibitor) were purchased from Abcam (Cambridge, UK). 3-MA was obtained from Sigma Aldrich (St. Louis, MO, USA). Verapamil was purchased from Hefeng Pharmaceutical (Shanghai, China). The primary antibody against phospho-AMPK, AMPK, phospho-mTOR, mTOR and GAPDH were acquired from the Cell Signaling Technology Inc (Danvers, MA, USA). The primary antibodies against TXNIP, LC3B and Runx2 purchased from Sigma-Aldrich (St. Louis, MO, USA). Anti-Galectin-3, anti-P62, anti-NLRP3, anti-caspase-1, anti-IL-1β, anti-OPN and anti-BMP2 were obtained from Abcam. All other chemicals were from commercial sources.
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5

Angiotensin II Receptor Antagonist Preparation

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Telmisartan and valsartan were purchased from Tokyo Chemical Industry Co. (Tokyo, Japan). Irbesartan and losartan were purchased from Wako Pure Chemical Industries (Osaka, Japan). Telmisartan was prepared as a 10 mM stock solution in dimethyl sulfoxide (DMSO). Irbesartan and valsartan were prepared as 100 mM stock solutions in DMSO, and losartan was prepared as a 100 mM stock solution in H2O. The stock solutions were stored at -20°C. Compound C was purchased from Abcam (Cambridge, UK). MK-2206 was purchased from ChemScene Chemicals (Monmouth Junction, NJ, USA). SCH772984 was purchased from Selleck Chemicals (Houston, TX, USA).
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6

Cannabinoid Compounds Dissolution for Research

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Δ9-Tetrahydrocannabinol (Δ9-THC, kindly provided by Dr. Satoshi Morimoto, Kyushu University) was dissolved in DMSO (FUJIFILM Wako Pure Chemical, Osaka, Japan) at a final concentration of 100 mM and stored at −80 °C until use. Ethanol, AM251, and AM630 were purchased from FUJIFILM Wako Pure Chemical. Tauroursodeoxycholic acid (TUDCA) was from Millipore Corp (USA). 5-Aminoimidazole-4-carboxamide-1-β-d-ribofuranoside (AICAR) was from Sigma-Aldrich (St. Louis, MO, USA). Compound C was from abcam (Cambridge, MA, USA).
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7

Compound C Modulates BMP2 Signaling

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Dulbecco’s modified Eagle medium (DMEM), phosphate-buffered saline, penicillin-streptomycin, and 0.25% trypsin-EDTA were purchased from Gibco-BRL (USA). Fetal bovine serum (FBS) was purchased from MP Biomedicals (Korea). Compound C was purchased from Abcam (USA). Emerald Amp GRPCR Master Mix was purchased from Takara (Japan), and AmpiGene qPCR Green Mix Hi-ROX was purchased from Enzo (USA). Recombinant human BMP2 was purchased from Cowellmedi (Korea). Antibodies against BMP2, FTO, CHOP, ATF4 and β-actin were obtained from Santa Cruz Biotechnology (USA). Antibodies against AMPK and phospho-AMPK (p-AMPK) were purchased from Cell Signaling Technology (USA). Antibodies against Dlx5 were purchased from Abcam.
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8

Cell Line Culture and Compound Screening

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Aspc-1, HepG2, Panc02, and H22 cell lines were obtained from the KeyGEN Biotechnology Company (China). HT1080 and SW480 were obtained from the FuHeng BioLogy Company (China). HT1080 cancer cells were cultured in Eagle’s Minimum Essential Medium supplemented with 10% fetal bovine serum (FBS), glutamine (2 mM), penicillin (100 U/ml), and streptomycin (0.1 mg/ml). SW480, Aspc-1, HepG2, Panc02, and H22 were cultured in high Dulbecco’s Modified Eagle’s Medium (DMEM) supplemented with 10% FBS, L-glutamine (4 mM), and penicillin (100 U/ml) and streptomycin (0.1 mg/ml). All cell lines were maintained in a humidified atmosphere containing 5% CO2 at 37 °C and tested for mycoplasma prior to the commencement of experiments. Unless otherwise indicated, cell culture medium was changed every 3 days, and cells were passaged using 0.05% trypsin/EDTA. Erastin (#HY-15763), sorafenib (#HY-10201), sulfasalazine (#HY-14655), DON (#HY-108357), RSL3 (#HY-100218A), L-Buthionine-(S,R)-sulfoximine (BSO, #HY-106376A), ferrostatin-1 (#HY-100579), Z-VADFMK (#HY-16658), AICAR (#HY-13417), BafA1 (#HY-100558), N-Acetylcysteine (#HY-B0215), and Necrosulfonamide (#HY-100573) were purchased from MedChemExpress (USA). Compound C (#ab120843) was purchased from Abcam. Deferoxamine mesylate (#D9533) was purchased from Sigma-Aldrich.
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9

Inflammatory Response Modulation Protocol

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Complete Freund’s adjuvant (CFA) (#F5881) was purchased from Sigma-Aldrich. AICAR (#9944) was obtained from Cell Signaling Technology, and Compound C (# ab120843) was purchased from Abcam. Recombinant mouse IL-1ra/IL-1F3 (# 480-RM-050) was purchased from R&D systems.
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10

AMPK Signaling Pathway Analysis

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Antibodies against GAPDH (sc-25778) were purchased from Santa Cruz Biotechnology. Antibodies against phospho-ACC (Ser79) (CST3661), phospho-AMPKα (Thr172) (CST2535) and total AMPK (CST2532) were purchased from Cell Signaling Technology. Bis-Tris 4–12% polyacrylamide gels (345–0123), MES running buffer (161–0789) and horseradish peroxidase secondary antibody conjugate (170–6515) were obtained from Bio-Rad. Polyvinylidene Fluoride (PVDF) Immobilon-P membrane (IPVH00010) was manufactured by Merck Millipore. Protein molecular weight marker (RPN800E) was purchased from GE Healthcare Life Sciences, while enhanced chemiluminescence (ECL) reagent (32209) and BCA protein assay were purchased from Life Technologies. Metformin was obtained from Calbiochem (Merck Millipore), 2-deoxy-D-glucose from Sigma-Aldrich and Compound C (Dorsomorphin) and A-769662 from Abcam. All other reagents, unless otherwise specified, were purchased from Sigma-Aldrich or Merck Millipore.
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