The largest database of trusted experimental protocols

6 protocols using ab114977

1

Immunohistochemical Analysis of HIF-1α, METTL3, and GPX4

Check if the same lab product or an alternative is used in the 5 most similar protocols
Paraffin‐embedded tissue sections were deparaffinised in xylene and hydrated with graded ethanol. After being treated with 3% hydrogen peroxide, the sections were blocked with 5% BSA and incubated with primary antibodies against HIF‐1α (1:50, ab114977, Abcam), METTL3 (1:50, ab195352, Abcam) and GPX4 (1:100, ab125066, Abcam) at 4°C overnight. Then, a secondary antibody conjugated with horseradish peroxidase was used, followed by diaminobenzidine staining and counterstaining with haematoxylin. The slides were analysed under light microscopy (Carl Zeiss).
+ Open protocol
+ Expand
2

Western Blot Analysis of Protein Samples

Check if the same lab product or an alternative is used in the 5 most similar protocols
Extracted protein samples were boiled for 5 min and separated by electrophoresis (Bio-Rad, Richmond, CA) in 12% SDS-PAGE gel before electroblotted (Bio-Rad) onto a polyvinylidene fluoride membrane (Millipore, Billerica, MA) [11 (link)]. After polyvinylidene fluoride membranes were blotted with Tris buffer containing 5% fat-free dry milk and 0.05% Tween-20 (TBST; 0.05% Tween 20, 100 mmol/L of Tris-HCl, and 150 mmol/L of NaCl, pH 7.5) for 1 h at 25°C, they were rinsed in TBST for 4 times and incubated overnight at 4°C with primary antibodies, which were mouse polyclonal GAPDH (Abcom, ab22556), rabbit polyclonal HIF-1α (Abcam, ab114977), mouse monoclonal VEGF (Abcam, ab1316) and rabbit polyclonal VEGFR1 (Abcam, ab2350) with 1:3000, 1:2000, 1:2000 and 1:2000 dilutions, respectively. The membranes were washed in the same manner as described above and incubated with the horseradish peroxidase-conjugated secondary antibody (1:5,000; Sigma) for 40 min. Then, the membranes were washed 6 times for 5 min in TBST and the blots were detected using Lumi-light Western Blotting substrates (Biofuture, Beijing, China) and analyzed with the Imaging Analysis Software of National Institutes of Health (Bethesda, MD).
+ Open protocol
+ Expand
3

Protein Expression Analysis by WB

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tissue samples homogenization, protein extraction, denaturing polyacrylamide gel electrophoresis (SDS-PAGE), and WB was performed as previously described [27 (link)]. The membranes were subjected to blocking by using Tris buffered saline (TBS: 10 mM Tris-HCl, pH 7.4, 165 mM NaCl) added with 0.1% Tween 20 (TTBS) and 5% non-fat dry milk, at room temperature for 1 h. The anti-HIF antibody (#ab114977, Abcam) at 1:1000 dilution was incubated overnight at 4 °C.
Following four washing steps of 10 min in TTBS, donkey anti-rabbit secondary antibody conjugated with peroxidase was employed at 1:2000 dilution for 1 h at room temperature. After additional washing steps, bound antibody was visualized by enzyme chemiluminescence with Clarity ™ Western ECL Blotting Substrate (Bio-Rad Laboratories, Milano, Italy). The blots were stripped and reprobed for β-actin (CP01, Calbiochem, San Diego, CA, USA) (1:500) as a loading control in order to perform normalization. Protein quantization and normalization were performed as reported in a previous study [27 (link)].
+ Open protocol
+ Expand
4

Immunohistochemical Analysis of HIF-1α and Ki-67

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tissue sections were deparaffinized, rehydrated, and treated with 3% H2O2 for 15 min to inhibit endogenous peroxidase activity. Following heat-induced epitope retrieval in 10 mM citrate buffer (pH 6.0) in a microwave for 30 min, the slides were incubated at 4 °C overnight with a prediluted primary antibody (HIF-1α, ab114977, Abcam; Ki-67, #9027, Cell Signaling Technology). After incubation with a secondary antibody, the signal was developed with 3,3′-diaminobenzidine tetrachloride.
+ Open protocol
+ Expand
5

Docetaxel and Lactate Metabolism Regulation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Docetaxel (ID0400) and lactate (L8601) obtained from Solarbio life science (Beijing, China). lactate assay kits (KA0833) was purchased from Abnova. The SimpleChIP® Enzymatic Chromatin IP Kit (Magnetic Beads) (9003) was from Cell Signaling Technology (Danvers, MA, USA). Glucose uptake fluorometric assay kit (MAK084) was purchased from Sigma Aldrich (St. Louis, MO, USA). Antibodies targeting PKM2 (Abcam, ab137852,1:2000 for WB), HIF-1α (Abcam, ab114977,1:2000 for WB), PFKP (Abcam, ab119796,1:2000 for WB), α-tubulin (Abcam, ab7291,1:4000 for WB) and β-actin (Abcam, ab8226,1:4000 for WB) were purchased from Abcam Company (MA, USA); Fetal boive serum (FBS), Alexa-488- and 594-conjugated secondary antibodies were from Invitrogen (Thermo Fisher Scientific). The trizol was purchased from Invitrogen and All-in-One First-Strand cDNA Synthesis Kit and All-in-One qPCR Mix were obtained from GeneCopoeia (Guangzhou, China). Subcellular fractionation was conducted using NE-PER™ Nuclear and Cytoplasmic Extraction Reagents (thermo fisher) following the manufacturer’s recommendations. All ultrapure reagents were from Promega (Madison, WI, USA).
+ Open protocol
+ Expand
6

In vivo and in vitro Immunohistochemistry

Check if the same lab product or an alternative is used in the 5 most similar protocols
As previously described (12 (link)), in vivo specimens were fixed in formaldehyde, decalcified using EDTA, processed, embedded in paraffin, and sectioned through the entire ankle joint using 5 #03BC;m thin sagittal sections (6 sections analyzed per in vivo specimen with n=2–4 specimens in each experimental group). Explanted tendons were embedded in HistoGel (Thermo) before fixation, processed, paraffin embedded, and then sectioned longitudinally (6 sections analyzed per in vitro specimen with n=3–4 specimens in each experimental group). For immunohistochemistry, sections were deparaffinized and incubated overnight at 4°C with anti-HIF1A (ab114977, rabbit polyclonal against the human C-terminal (50-residues), Abcam, San Francisco, CA) followed by biotinylated anti-rabbit IgG as a secondary antibody. All sections were counterstained with methyl green.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!