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3 protocols using bare fused silica capillary

1

Non-Reduced and Reduced CE-SDS for Protein Analysis

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Capillary electrophoresis-sodium dodecyl sulfate (CE-SDS) is used for separation of denatured protein size variants under non-reduced or reduced conditions. For non-reduced CE-SDS (nrCE-SDS), drug product samples of ABP 501 and adalimumab RPs were denatured with sodium dodecyl sulfate (Beckman Coulter, Jersey City, NJ, USA) at 60 °C for 5 min. For reduced CE-SDS (rCE-SDS), β-mercaptoethanol (Thermo Scientific) was added to the protein denaturation step to reduce the disulfide bonds. After denaturation, both non-reduced and reduced samples were injected onto a bare, fused silica capillary (Beckman Coulter, Jersey City, NJ, USA) and separated based on hydrodynamic size resulting from an applied electric field in which migration of smaller-sized proteins is inversely related to overall size. Analytes were monitored by UV absorbance at 220 nm, and purity evaluated by determining the peak area of each species as a percentage of the total peak area.
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2

Protein Characterization by SE-HPLC and CE-SDS

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High molecular weights were measured through the size exclusion high performance liquid chromatography (SE-HPLC). A sample was injected onto a TSK-GEL G3000SWXL analytical column, which was connected to a Waters HPLC system; monitoring was done by ultraviolet (UV) detection (λ = 280 nm). A mobile phase consisting of 100 mM sodium phosphate and 200 mM sodium chloride, pH 6.8, was used. The flow rate was 0.5 mL/min, and monomers and impurities were detected at a UV wavelength of 280 nm. Data were acquired and processed by Empower™ software.
Purity and impurity results for %IgG and %2H1L were measured through capillary electrophoresis-sodium dodecyl sulfate (CE-SDS). CE-SDS analysis was conducted with a high-performance capillary electrophoresis system (PA 800 plus Pharmaceutical Analysis System; Beckman Coulter). The sample was electrokinetically introduced onto a capillary (Beckman Coulter, bare fused-silica capillary, 50 µm/30.2 cm) by applying voltage at − 5 kV for 20 s and was separated in the capillary cartridge. Electrophoresis was performed at a constant voltage and monitored by UV detection (λ = 220 nm) through the capillary window and aperture. Data were acquired and processed by 32 Karat or Empower software with integration capabilities.
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3

RhAT N-glycan Analysis Protocol

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RhAT was produced at Kyowa Kirin (Tokyo, Japan), phAT was purchased from Japan Blood Products Organization (Tokyo, Japan), N-glycosidase F (PNGase F) was purchased from New England Biolabs (NEB) (Ipswich, MA), 2-aminobenzamide (2-AB) and tris(hydroxymethyl)aminomethane (Tris) were purchased from Nacalai Tesque (Tokyo, Japan), NaBH3CN, dimethylsulfoxide (DMSO) and iodoacetoamide (IAM) were purchased from Sigma-Aldrich (St. Louis, MO), acetic acid, acetonitrile, sodium acetate, sodium hydroxide, sodium dodecyl sulfate (SDS), disodium hydrogenphosphate, citric acid, and sodium bicarbonate were purchased from Wako Pure Chemical Industries (Tokyo, Japan), guanidine HCl was purchased from MP Biomedicals (Santa Ana, CA), 2,5-dihydroxybenzoic acid (DHB) was purchased from Waters (Milford, MA), peptidyl-Asp metalloendopeptidase (Asp-N) was purchased from Promega (Fitchburg, WI), neuraminidase was purchased from Roche Diagnostics (Risch-Rotkreuz, Switzerland), β-galactosidase was purchased from Calbiochem (Hayward, CA), SDS gel buffer, bare fused-silica capillary and 5-carboxytetramethylrhodamine succinimidyl ester (5-TAMRA SE) were purchased from Beckman Coulter, Inc. (Fullerton, CA), NAP-5 columns was purchased from GE Healthcare Life Sciences (Piscataway, NJ), dithiothreitol (DTT) was purchased from Life technologies (Carlsbad, CA).
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