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17 protocols using 100 mm cell strainer

1

Isolation of Adipose-Derived Mesenchymal Cells

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Mesenchymal cells were isolated from lipoaspirates using the procedure described in [23 (link)]. Adipose tissue was transferred from the lipoaspirates syringe to a sterile 10 cm round Petri dish. After mincing with sterile scissors, the tissue was transferred to a 50 mL tube and incubated with 0.2% (w/v) collagenase type I in DMEM for 1 h at 37 °C in a shaking water bath. The digested tissue was transferred to a 10 mL tube and centrifuged at 322× g for 10 min. The pellet was resuspended in DMEM (Gibco) supplemented with 3% FBS, filtered through a sterile strain and centrifuged again at 322× g for 10 min. The pellet was resuspended in 5 mL of RBC lysis buffer (Thermo Fisher Scientific, Rodano, Italy) for 5 min. To eliminate fat residues, the solution was transferred to a new 10 mL tube and further centrifuged at 322× g for 10 min. The pellet was resuspended in 10 mL of DMEM F12 with 3%FBS and filtered through a 100 mm cell strainer (Falcon). The collected cells were counted and grown in DMEM at 37 °C and 5% CO2 in a water-jacketed incubator.
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2

Establishment of Mouse GBM Tumor Primary Cultures

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Primary cultures of mouse GBM tumors were established as follows: tumors were excised and minced in 0.25% trypsin (w/v), 1 mM ethylenediaminetetraacetic acid (EDTA) and allowed to disaggregate for 15 minutes at 37°C. The resulting cell suspension was then strained through a 100-mm cell strainer (Falcon). The single suspension of cells was washed in phosphate buffered saline (PBS) twice and plated on 0.2% gelatin-coated tissue culture plates. Cells were fed every 24 hours with fresh media that consisted of Dulbecco’s modified Eagle’s medium (DMEM) supplemented with 10% heat inactivated fetal bovine serum and antibiotics. For doxycycline treatment, cells were grown in DMEM 0.1% FBS for 16 hours and DOX was added at the indicated final concentrations and cells were incubated for the indicated period of time at 37°C in 5% CO2.
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3

Isolation and Culture of Endometriotic Cells

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After excision, the human endometriotic tissue was rinsed with phosphate buffered saline (PBS). The endometrial lining was detached from the myometrium, minced in Hank’s balanced salt solution, and then digested with collagenase II (Solarbio, Beijing, China) at 37 °C for 2 h. Follwing this, they were centrifuged, rinsed, and resuspended in Dulbecco’s modified Eagle’s medium (DMEM)/F12 medium (Solarbio) containing 10% fetal bovine serum (FBS; Solarbio), 100 U/mL penicillin (Solarbio), and 100 mg/mL streptomycin (Solarbio). The cell suspension was then filtered through a 100 mm cell strainer (BD Falcon, Franklin Lakes, NJ, USA). Following this, cells were centrifuged, resuspended, and cultured in DMEM medium in a 5% CO2 incubator at 37 °C. At confluence, endometriotic cyst stromal cells were treated with 10 ng/mL recombinant human TGF-β1 (catalog number: PHG9214; Invitrogen, Carisbad, CA, USA) for 48 h.
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4

Spleen Cell Isolation and Characterization

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Mice were anesthetized, and sterile normal saline was injected into the left ventricle to remove blood from organs. Then, the spleens were used to harvest cell suspensions by pressing these tissue pieces through a 100-mm cell strainer (BD Falcon) and then suspending in Hanks’ balanced salt solution (HBSS). Red blood cells were lysed with ammonium chloride (NH4Cl) for 10 min. Cell suspensions were incubated with LIVE/DEAD Zombie NIR™ Fixable Viability Kit (Biolegend) for 20 min, and then resuspended at 2–3 × 106 cells/ml in complete RPMI 1640 medium with 10% fetal bovine serum (FBS).
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5

Isolation and Culture of Primary Adherent Cells

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Waste LPI fractions were received from the SNBTS islet isolation lab. LPIs were washed once in SMPL medium, centrifuged at 300 £ g for 5 min and then cultured at 0.006 mL/cm 2 at 37°C in 5% CO 2 in SMPL medium (e.g., 0.45 mL LPI fraction in a T-75 flask plus 9.5 mL SMPL medium). Explant outgrowth was assessed, and adherent cells were observed migrating from the explanted materials. The medium was carefully exchanged at day 7 and thereafter changed every 3À4 days. Cultures were observed and photographed using an EVOS cell imaging system (Thermo Fisher Scientific). Once the cultures had reached 80À90% confluence, the cells were recovered with a 10-min incubation at 37°C with 0.13 mL/cm 2 TrypLE Select £1 (Thermo Fisher Scientific). To remove cell debris, the material was passed through a 100-mm cell strainer (Falcon). The cells were counted using a hemocytometer and designated passage 0. These cells were either cryopreserved at 1 £ 10 6 per 2-mL cryovial in CryoStor CS10 (Sigma-Aldrich) or re-cultured at a density of 3000 cells/cm 2 in CellBIND flasks (Corning).
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6

Establishment of Mouse GBM Tumor Cultures

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Primary cultures of mouse GBM tumors were established as follows: tumors were excised and minced in 0.25% trypsin (wt/vol) and 1 mM EDTA and allowed to disaggregate for 15 min at 37oC. The resulting cell suspension was then strained through a 100-mm cell strainer (Falcon). The single suspension of cells was washed in PBS twice and plated on 0.2% gelatin-coated tissue culture plates. The cells were fed every 24 h with fresh media that consisted of DMEM supplemented with 10% heat-inactivated fetal bovine serum and antibiotics. For DOX treatment, the cells were grown in DMEM 0.1% FBS for 16 h and DOX was added at the indicated final concentrations, and the cells were incubated for the indicated period of time at 37°C in 5% CO2.
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7

Histological Analysis of Liver Granuloma

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Fresh hepatic tissues were xed in 4% paraformaldehyde for 24 h, and then were embedded with para n. The 4µm liver sections were prepared and stained with hematoxylin & eosin (HE) staining for the granuloma size and the extent of liver granulomatous in ammation analysis. The severity of liver granulomatous in ammation was evaluated according to calibrated criteria (Table 1), Fig. 1Band reference [1] . Mice were anaesthetized, and sterile normal saline was injected into left ventricle to remove blood from organs. Then, the spleens were used to harvest cell suspensions by pressing these tissue pieces through a 100-mm cell strainer (BD Falcon) and then suspending in Hanks' balanced salt solution (HBSS). Red blood cells were lysed with ammonium chloride (NH4Cl) for 10 min. Cell suspensions were incubated with LIVE/DEAD Zombie NIR™ Fixable Viability Kit(Biolegend) for 20 min, and then resuspended at 2-3×10 6 cells/ml in complete RPMI 1640 medium with 10% FBS.
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8

Purification of GFP-Positive Embryonic Cells

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Embryo heads at embryonic day (E) 9.5 were dissected from the body below the first branchial arch and collected in DMEM containing 10% FBS. Since Wnt1-Cre is expressed in the dorsal neural tube, the neural tube was removed from embryos obtained from this cross (Supplementary Fig. S1A). Two to four GFP positive heads were pooled for each sample and digested with 100 μL Trypsin (0.025%, Gibco Life Technologies), 20 μL collagenase (1 mg/mL, Company) and 80 μL PBS (Life Technologies) for 5-10 min at 37 °C and 5% CO 2 and then mechanically dissociated by pipetting. Following a second 10 min incubation the tissues were again mechanically dissociated. Prior to cell sorting, 500 μL PBS/ EDTA (1:1 500 mM EDTA: PBS) was added to the dissociated cells and they were filtered through a 100 mm cell strainer (Falcon). Cell sorting yielded 4000-18000 GFP-positive cells per sample, which were centrifuged at 4000 rpm for 5 min at 4 °C and the pellet washed with cold PBS, followed by further centrifugation at 4000 rpm for 5 min at 4 °C. The cell pellet was snap frozen in liquid nitrogen and stored at À 80 °C.
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9

Isolation of Epididymal Adipocytes

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Epididymal fat pads were removed, minced, and digested using collagenase type II (Calbiochem) at 37 C for 1 hr in Krebs-Ringer-HEPES-bicarbonate (KRH) buffer supplemented with BSA (3.5%; Roche). The digested tissue was filtered through a 100 mm cell strainer (BD Falcon), and the floating adipocytes were recovered and used for RNA or protein extraction.
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10

Isolation and Culture of hASCs

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Isolation and culture of human adipose tissue-derived mesenchymal stem cells (hASCs) hASCs were collected from three independent female donors as waste material during tumescent abdominal liposuction as described in detail previously. (21, 39, 40) All patients had given prior written consent. For isolation of hASCs, the harvested lipoaspirate was first washed with PBS (PAA, Dartmouth, MA, USA) to remove cell debris, then digested with collagenase NB4 (Serva, Heidelberg, Germany) for 1 hour to further disintegrate adipose tissue agglomerates. Subsequent centrifugation resulted in a cell pellet that contained the hASCs. The cell pellet was resuspended in erythrocyte lysis buffer to eliminate red blood cells, and washed with PBS. Cells were next filtered through a 100-mm cell strainer (BD, Vienna, Austria) and cultured at 37°C, 5% CO 2 and 95% air humid in DMEM-low glucose/HAM's F-12 medium (GE Healthcare, Vienna, Austria) supplemented with 10% fetal calf serum (FCS; Sigma-Aldrich, Munich, Germany), 4 mM L-glutamine, and 1 ng/ mL recombinant human basic fibroblast growth factor (rhFGF; R&D Systems, Minneapolis, MN, USA) as published. (21) Medium was refreshed twice a week and cells were utilized for further experiments or cryopreservation on reaching 3 Â 10 5 cells/plate. All the cells used in the performed experiments were within one to three passages.
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