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26 protocols using methylene blue solution

1

Cell Adhesion Quantification on Collagen

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Wells were coated with COL1. After incubation with BSA solution (1%) for 1 h, 20,000 cells were seeded to a total volume of 100 µL medium per well and supplemented with DPBS, 45 min at 37 °C and 5% CO2. Afterwards, wells were gently washed to remove nonadherent cells. Adherent cells were fixated by formaldehyde (3%, Merck, Darmstadt, Germany) and stained with methylene blue solution (1%, Merck). After washing with DPBS, cells were lysed using 0.1 M HCl and methylene blue was quantified at 620 nm using a plate reader (Thermomultiscan EX, Thermo Fisher Scientific Inc).
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2

HaCaT Cell Migration Assay in Differentiation Conditions

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HaCaT cells were first cultured in H-Ca medium and maintained in an incubator under 5% CO2 at 37 °C. The short-term cell culture was used for the HaCaT cell migration assay, with incubation for 48 h in L-Ca medium. After 48 h culture in L-Ca medium, involucrin expression was minimal, similar to cells cultured in undifferentiated conditions. A cell migration assay was performed using a transwell chamber plate (6.5 mm D.I., 8.0 μm pore size, polycarbonate membrane; Transwell Permeable Supports 3422, Corning Inc., New York, NY, USA) as previously described [12 (link)]. Cells subjected to short-term cell culture as described above were seeded at a density of 2 × 104 cells/well in the upper chamber supplemented with 200 μL H-Ca medium, while 750 μL H-Ca medium with or without experimental reagents (Sema3A, kCer, or histamine) was added to the lower chamber compartment. After 48 h incubation at 37 °C, the unmigrated cells in the upper chamber were gently removed with a cotton swab, and the cells that had migrated to the lower compartment of the membrane were fixed with cold absolute methanol for 10 min and stained with GIEMSA’S AZUR EOSIN Methylene Blue solution (109,204, Merck, Darmstadt, Germany) as described previously [17 (link)].
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3

Hydrogel-Mediated Methylene Blue Release

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Release behaviour of SN and DN hydrogels was studied using methylene blue (MB) solution (Sigma-Aldrich, St. Louis, MO, USA). The pieces of hydrogels (≈2 cm2) were dried at room temperature for three days and then in a vacuum oven until it reached the constant weight. Dried hydrogels were immersed in MB solution (0.15 g/L) at room temperature and left for two days to attain equilibrium swelling condition. The concentration of MB molecules inside hydrogels c0 was determined from the mass of dried and swollen hydrogels. The hydrogels were then removed from MB solution to phials filled with 4 mL of water placed in water bath thermostated at 45 °C. Time-dependence of MB concentration was detected with UV-Vis spectrophotometer (Hitachi U-2900, Hitachi, Tokyo, Japan) at 664 nm using MB signal of maximum intensity at 664 nm. At regular time intervals, MB solution released from hydrogel was pipetted out and the concentration of MB c(t) was measured. The fraction of released MB f(t) was calculated as
ft=c(t)c0
Obtained time-dependencies of the fraction of released MB f(t) was fitted with expression
ft=fMBbexptτ
where fMB is the equilibrium fractions of released MB, τ is the release delay time and b is a coefficient.
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4

Synthesis and Characterization of Graphene Oxide

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Analytical-grade NaCl (>99%) and FeSO4·7H2O were purchased from Frutarom (Israel). Methylene blue (MB) solution, concentrated sulfuric acid (H2SO4, 98%), sodium nitrate (NaNO3, ≥99.9%), hydrogen peroxide (H2O2, 30% w/w in H2O), and hydrogen chloride (99.99%) were obtained from Sigma Aldrich™. Graphite KS-25 (Lonza), potassium permanganate (KMnO4, ≥99.9%, Bio-Lab Ltd) and double-distilled water (DDW) prepared in the laboratory were used.
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5

Polymer Film Modification Protocol

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The
following analytical
grade chemicals were used without further purification: methacrylamide
(MAA), N,N-methylenebis(acrylamide)
(MBAA), potassium persulfate (PPS), ammonium persulfate (APS), sodium
bisulfite (NaHSO3) solution (SBS), sodium hypochlorite
solution (NaOCl, 5%), acetic acid (AcOH), sodium iodide (NaI), sodium
thiosulfate (0.1 N), methylene blue (MB) solution (1.5%), and crystal
violet (CV) solution (1%), which were purchased from Sigma-Aldrich
(Rehovot, Israel); and PP films (air corona treated) of A4 size and
50 μm thickness, which were obtained from Hanita Coatings RCA
Ltd. (Hanita, Israel). Deionized water was purified by passing through
an Elgastat Spectrum reverse osmosis system (Elga Ltd., High Wycombe,
UK).
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6

Viability of Thin Tissues via Methylene Blue

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Two nude mice (age 5 weeks) were anesthetized using 100 µL of a mixture of ketamine 10 mg/mL + xylazine 2 mg/mL injected intraperitoneally. A few days following anesthesia, the mice were sacrificed and for each one both ears were taken for measurements under room temperature. In order to examine thin tissues’ viability, the ears were divided into two groups: group 1 – two ears were measured at the same day and group 2 – two ears were measured after 6 days of being kept under 4°C refrigeration. Following these control measurements, for each group, 5 µL of aqueous 2 mM Methylene blue (MB) solution (Sigma-Aldrich Co.) was applied to the ears and reflection signals were measured again after 24 hours. The ears were placed in the experimental setup on a vertical polycarbonate mount fixed by Sellotape® (polypropylene-based tape). Three measurements of reflection signals were obtained from adjacent different segments of each ear.
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7

Photodynamic Therapy for Periodontitis

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For the aPDT treatment, SRP of the left mandibular first molar was performed in the groups PT, PT+1aPDT and PT+4aPDT. Methylene blue (MB) solution (Sigma Chemical Co., St.
Louis, MO, USA) solution (100 μg/mL) [42] was slowly poured into the periodontal pocket around the left mandibular first molar, using a syringe (1 mL) and an insulin needle without a bevel [42] . After 1 min of MB application, laser light was applied to one point at each buccal and lingual aspect of the left mandibular first molar in contact with the gingivae in groups treated with aPDT. At the time of the aPDT there was no blood at the area. The laser irradiation followed the protocol reported by Theodoro et al. [7] . An Indium-Gallium-Aluminium-Phosphorus (InGaAlP) laser (THERA LASE®, D.M.C. Equipamentos Ltda ® , São Carlos, SP, Brazil) with a 660-nm wavelength and a 0.0283-cm 2 output fibre diameter was used in this study. The irradiation was performed in each session in both first molars (left and right) with 0.035 W power for 60 seconds in the centre of the labial surface and for 60 seconds in the centre of the lingual surface (4.2 J total energy). The tooth received 74.2 J/cm 2 (2.1 J/point) energy density per point.
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8

Cell Viability Assay on Collagen-Coated Surfaces

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Methylene blue staining was used to visualize the attached L929 cells on the collagen-coated polystyrene culture plate and the PDMS 12 h after seeding. The cells were fixed with 10% buffered formalin (FUJIFILM Wako Pure Chemical Corporation) and stained with 1.4% methylene blue solution (Sigma-Aldrich) for 30 min at room temperature. After washing with 10 mM sodium borate buffer (Sigma-Aldrich), stained cells were observed under a light microscope.
The cell viability on collagen-coated polystyrene culture plates and PDMS 12 h after seeding was quantified using a tetrazolium salt-based assay (WST-1; Roche Diagnostics, Tokyo, Japan). For WST-1-based colorimetry, 10% (v/v) WST-1 reagent was added to the culture medium. The culture plate was incubated at 37 °C for 3 h, and then the supernatants were transferred into a 96-well microplate. The amount of formazan produced in the supernatant was measured using an ELISA plate reader at 450 nm.
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9

Methylene Blue Viability Assay

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Cellular viability was determined using methylene blue staining protocol. Briefly, cells were grown exactly as for performing fluctuation assays. Cultures were diluted 1/100 in SC medium and 100 µL of a filter sterilized 0.1% (w/V) methylene blue solution (Sigma-Aldrich) was added to 100 µL of this diluted culture. Samples were incubated at room temperature for 1 min and subsequently loaded on a counting slide (KOVA Glasstic Slide 10). Cells were visualized by microscopy and counted. Blue cells were considered dead and unstained cells viable. At least three independent cultures were counted for each strain and condition, with a minimum of 600 cells counted in total for each strain.
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10

Quantifying SDS Residues in ADM Tissues

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The amount of detergent (sodium dodecyl sulfate [SDS]) remaining in ADM tissues was analyzed using the methylene blue method [14 (link)]. The SDS complex with methylene blue is insoluble in chloroform and formation can be measured based on the optical density (OD) at 650 nm. H-ADM samples (H-ADM-high, H-ADM-low) decellularized using high (0.5%) and low (0.25%) SDS concentrations were soaked in sterile distilled water for 72 ± 2 hours at 37°C. Then, 1 μL of each eluate was mixed with 99 μL of 0.0125% methylene blue solution (Sigma-Aldrich) and 200 µL chloroform (Sigma-Aldrich), and vortexed for 1 minute. After incubation at room temperature for 30 minutes, 150 μL of the lower layer was transferred to a 96-well plate and OD650 was measured using a spectrophotometer (Molecular Devices, San Jose, CA, USA). The SDS concentration in each ADM sample was calculated based on a linear standard curve (R2 = 0.9956) generated with 10 mg/mL stock solution of SDS (Sigma-Aldrich).
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