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14 protocols using γ linolenic acid

1

Fatty Acid Standards Protocol

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FA standards, linoleic acid, γ-linolenic acid, oleic acid, palmitic acid, stearic acid, myristic acid, cis-5,8,11,14,17-eicosapentaenoic acid (EPA) and arachidonic acid (ARA) were obtained from Sigma (Madrid, Spain). Ethanol and acetone was obtained from PanReac AppliChem ITW Reagents (Barcelona, Spain). Ethyl acetate, hexane, methanol and chloroform was obtained from Macron Fine ChemicalsTM (Gliwice, Poland). All solvents used in this study were high-performance liquid-chromatography or analytical grade, and the water was distilled and processed through an ultrapure water system (Milli-Q Integral 3 Water Purification System, Millipore, Burlington, MA, USA).
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2

Fatty Acid and Oxidant Analysis

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Oleic acid (FA 18:1 (Δ9)), cis-vaccenic acid (FA 18:1 (Δ11)), linOleic acid (FA 18:2 (Δ9, Δ12)), γ-linolenic acid (FA 18:3 [Δ6, Δ9, Δ12], GLA), linolenic acid (FA 18:3 (Δ9, Δ12, Δ15), ALA) and 3-chloroperbenzoic acid (mCPBA) were purchased from Sigma-Aldrich (St Louis, MO, USA). Acetonitrile, isopropanol, formic acid, and water in Optima grade were purchased from Fisher Chemical (Fair Lawn, NJ, USA). Nitrogen gas for purging the sample stage enclosure was purchased from Arc3 Gases (Raleigh, NC, USA).
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3

Fatty Acid Derivatization Protocol

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Oleic acid (C18:1n-9, >99.0% purity), 11-octadecenoic acid (C18:1n-7, >99.0% purity), linolenic acid (C18:3n-3, >99.0% purity), γ-linolenic acid (C18:3n-6, >99.0% purity), linOleic acid (C18:2n-6, >99.0% purity), palmitOleic acid (C16:1n-7, >99.0% purity), heptadecanoic acid (C17:0, >99.0% purity), and heptadecanoic acid methyl ester (C17:0 methyl ester, >99.0% purity) were purchased from Sigma (St. Louis, MO, USA). The solution 5% H2SO4/CH3OH was freshly prepared by diluting H2SO4 (>98.0% Purity) by chromatographic-grade methanol, and 0.4 M NaOH/CH3OH was freshly prepared in our laboratory by dissolving reagent-grade NaOH in methanol.
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4

Fatty Acid Profiling Protocol

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Ethyl acetate (EtOAc), methanol (MeOH), acetonitrile (ACN), chloroform (CHCl3), sulfuric acid 96% (H2SO4) and propan-2-ol were purchased from Carlo Erba (Val de Reuil, France). Ammonium formate and the following standards were purchased from Sigma Aldrich (Saint-Quentin Fallavier, France): dodecanoic acid, myristic acid, palmitic acid, palmitoleic acid, stearic acid, oleic acid, linoleic acid, γ-linolenic acid, arachidic acid, arachidonic acid, nervonic acid, eicosapentaenoic acid and eicosatrienoic acid. Dimethyl carbonate (DMC) and lauric acid 99% were purchased from Acros Organics (Geel, Belgium). Formic acid was purchased from Fisher Scientific SAS (Illkirch, France). Nonanoic acid 98% and decanoic acid 99% were purchased from Alfa Aesar (Haverhill, MA, USA). Water was purified using a Milli-Q system (Millipore Corporation, Bedford, MA, USA). Phosphoric acid 85–90% (H3PO4) and Formic acid were purchased from Fisher Scientific SAS (Illkirch, France). Vanillin was purchased from Extrasynthese (Genay, France).
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5

Examining Fatty Acid and Antifungal Interactions

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The EFAs, namely α-linolenic acid (ALA; 18:3 ω-3), eicosapentaenoic acid (EPA; 20:5 ω-3), docosahexaenoic acid (DHA; 22:6 ω-3), linoleic acid (LOA; 18:2 ω-6), γ-linolenic acid (GLA; 18:3 ω-6), and arachidonic acid (AA; 20:4 ω-6) were purchased from Sigma-Aldrich (St. Louis, MO, USA). Fluconazole was purchased from Solarbio (Beijing, China). Dimethyl sulfoxide (DMSO) was used as a solvent to dissolve the EFAs and Fluconazole. Stock solutions were kept at −20°C for a maximum of 4 weeks and were further diluted in RPMI 1640 medium (Gibco, Thermo Fisher Scientific, Waltham, MA, USA) before use. DMSO at <0.1% did not affect microbial growth or biofilm formation.
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6

Fatty Acids and 5-FU Preparation

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α-Linolenic acid (ALA, 18 : 3 n-3), eicosapentaenoic acid (EPA, 20 : 5 n-3,) docosahexaenoic acid (DHA, 22 : 6 n-3), linoleic acid (LA, 18 : 2 n-6), γ-linolenic acid (GLA, 18 : 3 n-6), arachidonic acid (AA, 20 : 4 n-6,) and 5-FU (5-fluorouracil) were obtained from Sigma (St. Louis, MO, USA). ALA, EPA, DHA, LA, GLA, and AA were dissolved in anhydrous ethanol and stored as stock solutions (20 mM) at –20°C. Also, 50 mM of 5-FU was dissolved in high purity water as a stock solution. For all studies, fatty acids and 5-FU were freshly prepared from stock solutions with cell culture media.
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7

Formulation and Characterization of Antioxidant Compounds

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Ethyl acetate (EtOAc), methanol (MeOH), toluene, hexane, formic acid, diethylether, glacial acetic acid, petroleum ether, sulfuric acid 96% (H2SO4) and dimethylsulfoxide (DMSO) were purchased from Carlo Erba (Val de Reuil, France). Dimethyl carbonate (DMC), sodium alginate, (±)-α-tocophérol 96% (vitamin E), oleic acid, linoleic acid, palmitic acid, myristic acid, stearic acid, palmitoleic acid, γ-linolenic acid, 2,3-bis-(2-methoxy-4-nitro-5-sulfophenyl)-2H-tetrazolium-5-carboxanilide (XTT), menadione and glucose were purchased from Sigma Aldrich (Saint-Quentin Fallavier, France). Phosphoric acid 85% was purchased from Merck pro analysis (Darmstad, Germany). Labrafac®® WL 1349 was purchased from Gattefossé (Saint-Priest, France). Montane 80®® and Montanox 80®® were purchased from Seppic (Castres, France). Copper nitrate Cu(NO3)2 was purchased from Fisher Scientific SAS (Illkirch, France). Vanillin, acetic acid trihydrate 99+% were purchased from Acros Organics (Geel, Belgium). Water was purified using a Milli-Q system (Millipore Corporation, Bedford, MA, USA).
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8

Detailed Fatty Acid Profiling Protocol

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The chemicals required for growth medium were obtained from VWR, Ireland, Thermo Fisher Scientific, Ireland, and Sigma Chemicals, Arklow, Ireland. HCl, NaOH, and sodium sulfate crystals were purchased from VWR, Ireland Acetonitrile, ammonium acetate, dichloromethane, chloroform, methanol, spectrophotometric grade 95% ethanol, sodium dodecyl sulphate, Tween-20, potassium dichromate, sulphuric acid, formic acid, phenol were also purchased from Sigma Chemicals. Fatty acid standards such as lauric acid (C12:0), myristic acid (C14:0), palmitic acid (C16:0), stearic acid (C18:0), oleic acid (C18:1n-9 cis), linoleic acid (LA, C18:2n-6 cis), γ-linolenic acid (GLA, C18:3n-6), arachidonic acid (ARA, C20:4n-6), eicosapentaenoic acid (EPA, 20:5n-3), docosapentaenoic acid (DPA, 22:5n-3) and docosahexaenoic acid (DHA, 22:6n-3) were obtained from Sigma Chemicals (Arklow, Ireland). All solvents used in this study were HPLC or analytical grade, and the water was ultrapure (TKA High Purity Water Systems, Niederelbert, Germany).
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9

Bacterial Expression Systems for Fatty Acid Supplementation

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As host cells, we used two strains of E. coli, namely JM109 (Yanisch-Perron et al., 1985 (link)) for the construction of plasmids and RosettaTM 2 (Merck Millipore, Darmstadt, Germany) for the expression of the target genes. The cells were grown in 2 mL of Luria–Bertani (LB) medium (Bertani, 1951 (link)) at 37°C with shaking at 180 rpm. All transformants were maintained in LB medium solidified with 1.5% (w/v) Bacto® agar (BD Biosciences Japan, Tokyo, Japan) in the presence of 100 μg/mL sodium ampicillin, 50 μg/mL chloramphenicol, or 50 μg/mL spectinomycin dihydrochloride pentahydrate, depending on the selection markers on the plasmids. To exogenously supply fatty acids to the culture of E. coli cells, 1 mM of each sodium salt of palmitoleic acid (16:1Δ9, Wako Pure Chemicals, Osaka, Japan), 18:1Δ9 (Tokyo Chemical Industry, Tokyo, Japan), linoleic acid (18:2Δ9,12, Funakoshi, Tokyo, Japan), γ-linolenic acid (18:3Δ6,9.12, Sigma-Aldrich Japan, Tokyo, Japan), α-linolenic acid (18:3Δ9,12,15, Funakoshi), or vaccenic acid (18:1Δ11, Sigma-Aldrich Japan) was added to the liquid LB medium. Corynebacterium urealyticum ATCC 43042 was grown on R agar1 with 0.5% (v/v) TWEEN 80 (Wako Pure Chemicals) and incubated at 37°C for 18 h.
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10

Fatty Acid Quantification Protocol

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Fatty acids were named using the formula Cx:yΔnc, as described previously (Simopoulos, 2006 (link)). FAME of myristic acid (C14:0), palmitic acid (C16:0), palmitoleic acid (C16:1Δ9c), heptadecanoic acid (C17:0), stearic acid (C18:0), oleic acid (C18:1Δ9c), LA (C18:2Δ9c,12c), ALA (C18:3Δ9c,12c,15c), γ-linolenic acid (C18:3 D6c,9c,12c) and Supelco® 37-component FAMEs Mix (C4–C24 unsaturated) were purchased from Sigma–Aldrich (St. Louis, MO, United States). HPLC-grade methanol, chloroform, n-hexane, and n-pentane were used in this study, which were purchased from Alltech Scientific (Chaoyang District, Beijing, China). n-hexane was used as a solvent to prepare standard stock solutions and dilutions. Heptadecanoate (C17:0) was used as an internal standard because it is generally not present in biological samples. All compounds and stock solutions were stored according to manufacturer’s protocol.
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