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52 protocols using poly d lysine

1

Kir4.1 Channel Expression Assay

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Cells were plated in poly D-Lysine coated 96-well plates on day 0 (Becton Dickinson Labware). On day 1, the indicated medium was added, and measurements were performed on day 2. For Kir4.1 experiments, stably transfected cell lines were made by subcloning wild-type or mutant Kir4.1 into pIRES-puro3 (Clontech) and selecting cells with puromycin (1 ug/ml). Stable cells were plated in normal K+ Dulbecco’s modified Eagle’s medium (DMEM), and Cl was measured. Additional details are provided in the Supplemental Information.
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2

Trigeminal Sensory Neuron Isolation Protocol

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Mice were anesthetized with isoflurane and sacrificed by decapitation and the TG or dura mater were removed and prepared for culture as previously described (24 (link)). For cultures with back-labelled TG neurons, TGs were taken 7 days following supra-dural application of the retrograde tracer, wheat germ agglutinin conjugated Alexa-Fluor 555 nm. After removal, tissue was placed in ice-cold Hanks balanced-salt solution (divalent free). Trigeminal tissue was dissociated enzymatically with collagenase A (1 mg/ml, 25 min, Roche, Indianapolis, IN) and collagenase D (1 mg/ml, Roche, Indianapolis, IN) with papain (30 units/ml) for 20 min at 37°C. Dural tissue was dissociated enzymatically with collagenase A (1 mg/ml, 30 min, Roche, Indianapolis, IN) and collagenase D (1 mg/ml, Roche, Indianapolis, IN) with papain (30 units/ml) for 25 min at 37°C. The tissues were then triturated through fire-polished Pasteur pipettes, and trigeminal cells were plated on poly-D-lysine (Becton Dickinson) and dural cells plated on untreated plates. After several hours at room temperature to allow adhesion, cells were placed in a room-temperature, humidified chamber in Liebovitz L-15 medium supplemented with 10% FBS, 10 mM glucose, 10 mM HEPES and 50 U/ml penicillin/streptomycin. Trigeminal cells were tested within 24 hours post plating and dural cell cultures were tested 2–4 days post plating.
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3

Trigeminal Ganglia Neuron Isolation

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Seven days following fluorogold application, trigeminal ganglia (TG) were removed, enzymatically treated, and mechanically dissociated as previously described [36 (link); 39 (link)]. Rats were anesthetized with isoflurane (Phoenix Pharmaceuticals) and sacrificed by decapitation. The TG were removed and placed in ice-cold Hanks balanced-salt solution (HBSS, divalent free). Ganglia were cut into small pieces and incubated for 25 min in 20 U/ml Papain (Worthington) followed by 25 min in 3 mg/ml Collagenase Type II (Worthington). Ganglia were then triturated through fire-polished Pasteur pipettes and plated on poly-D-lysine (Becton Dickinson) and laminin (Sigma)-coated plates. After several hours at room temperature to allow adhesion, cells were cultured in a room-temperature, humidified chamber in Liebovitz L-15 medium supplemented with 10% FBS, 10 mM glucose, 10 mM HEPES and 50 U/ml penicillin/streptomycin. Cells were used within 24 h post plating.
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4

Sperm Cell Flagellar Motility Imaging

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A bespoke imaging chamber (Cairn Research Ltd) was used for imaging, consisting of two orifices (inlet and outlet) and two parallel coverslips (top and bottom). The inner surface of the top coverslip was coated with 0.1% poly-d-lysine (Becton Dickinson) and air-dried to enhance sperm-cell attachment to the surface of the coverslip. The chamber was filled with the motile sperm cells collected after incubation. A particular cell of interest adhered by its head onto the surface of the coverslip but with freely moving flagellum was identified and imaged for a duration of 5 s (1662 imaging frames) prior to stimulation with 4AP. The chamber was then manually perfused with 1 ml of medium containing 4AP at a concentration of 2.5 mM using a 5 ml syringe. Following stimulation, imaging was carried out for an additional 5 s. All experiments were performed with medium at room temperature (21°C).
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5

Culturing and Maintaining Primary Neuronal Cells

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Sodium Chloride (NaCl), magnesium chloride (MgCl2), calcium chloride (CaCl2), glucose, ATP disodium salt, HEPES (4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid), naloxone hydrochloride and EGTA (ethylene glycol tetra acetic acid) were purchased from Sigma-Aldrich (St. Louis, MO). Potassium chloride (KCl) was purchased from Fisher Scientific (Waltham, MA) and collagenase type II was purchased from Worthington (Lakewood, NJ). Laminin and poly-D-lysine were purchased from BD bioscience (Franklin lanes, NJ); GDNF (glial cell-derived neurotrophic factor) was purchased from Neuromics (Edina, MN); FBS (fetal bovine serum) was purchased from Gemini Bio products (West Sacramento, CA); B-27, trypsin and neurobasal A media were purchased from Thermofisher (Waltham, MA). Morphine sulfate was obtained from National Institutes of Drug Abuse (Bethesda, MD).
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Newborn Rat Pup Neuronal Culture

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Wistar rat pups (newborn P0–1) were obtained from the Valladolid University animal facility. All animals were handled according to the ethical standard of Valladolid University under protocols approved by the animal housing facility and in accordance with the European Convention 123/Council of Europe and Directive 86/609/EEC. Fura-2/AM and Rhod-5N are from Invitrogen (Barcelona, Spain). Fetal bovine serum (FBS) is from Lonza (Barcelona, Spain). Horse serum, neurobasal medium, HBSS medium, B27, L-glutamine and gentamycin are from Gibco (Barcelona, Spain). Papain solution is from Worthington (Lakewood, NJ, USA). The poly-D-lysine and annexin V are from BD (Madrid, Spain). DNase I and antibody against the MCU are from Sigma (Madrid, Spain). IP3R1 and IP3R2 primary antibodies are from Santa Cruz Biotechnology (Dallas, TX, USA). IP3R3 primary antibody is from BD Transduction Laboratories (Madrid, Spain). ER tracker, mitotracker, tetramethylrhodamine, methyl ester (TMRM) and CM-H2DCFDA are from ThermoFisher Scientific. Aβ1–42 peptide is from Bachem AG (Bubenforf, Switzerland). Other reagents and chemicals were obtained either from Sigma or Merck.
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7

Wnt Signaling in Cortical Neurons

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Cortices from E14.5 embryos were dissociated mechanically by gentle pipetting. In all, 106 cells were plated on a coverslip coated with poly-D-lysine (BD), in neurobasal medium with Glutamax (Invitrogen), B27 (Invitrogen), N2 (Invitrogen) and 5% foetal bovine serum. After 1 day in vitro, neurons were serum-deprived for 6 h and then incubated with Wnt3a or Wnt7a (100 ng ml−1, R&D) for 5 h. Total RNA was extracted and gene expression levels estimated by qRT-PCR. For JNK inhibition, SP600125 (50 μM, Sigma) was added together with Wnt7a.
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8

Dissociated Cortical Neuron Culture Protocol

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Dissociated cortical neurons were prepared from embryonic day 17-18 (E17-18) rat cerebral cortex as described previously37 (link),51 (link),52 (link) and cultured in Neurobasal medium (Life Technologies, Carlsbad, CA) supplemented with B27 (Life Technologies), glutamine (Sigma, St. Louis, MO) and penicillin-streptomycin (Sigma). Neurons were plated on poly-D-lysine (BD Biosciences, San Jose, CA) and laminin (BD Biosciences) coated glass coverslips (12 mm, #1.5; Cat#: 64-0712, Warner Instruments, Camden, CT) or in glass bottom 35mm dishes made with #1.5 German optic cover glass (cat#: GBD00004-200, Cell E&G LLC, Houston, TX). Neurons were plated at 150,000/well in 24-well plates or at 180,000 neurons per 18 mm glass coverslip of a single 35 mm dish for transfection experiments and were maintained in a humidified 37°C incubator with 5% CO2.
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9

Dissociated Cortical Neuron Culture Protocol

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Dissociated cortical neurons were prepared from embryonic day 17-18 (E17-18) rat cerebral cortex as described previously37 (link),51 (link),52 (link) and cultured in Neurobasal medium (Life Technologies, Carlsbad, CA) supplemented with B27 (Life Technologies), glutamine (Sigma, St. Louis, MO) and penicillin-streptomycin (Sigma). Neurons were plated on poly-D-lysine (BD Biosciences, San Jose, CA) and laminin (BD Biosciences) coated glass coverslips (12 mm, #1.5; Cat#: 64-0712, Warner Instruments, Camden, CT) or in glass bottom 35mm dishes made with #1.5 German optic cover glass (cat#: GBD00004-200, Cell E&G LLC, Houston, TX). Neurons were plated at 150,000/well in 24-well plates or at 180,000 neurons per 18 mm glass coverslip of a single 35 mm dish for transfection experiments and were maintained in a humidified 37°C incubator with 5% CO2.
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10

Culturing and Transfecting Rat Cortical Neurons

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Cortices from rat embryos (E17–18) were dissected, dissociated, and plated on 24-well tissue-culture plates (4 × 105/well) coated with poly-D-lysine (BD Biosciences, San Jose, CA), as described (Moruno-Manchon et al., 2017 (link); Moruno Manchon et al., 2015 (link); Moruno-Manchon et al., 2018 (link)). Primary cortical neurons were grown in Neurobasal Medium (Life Technologies, Carlsbad, CA) supplemented with B-27 (Life Technologies), GlutaMAX (Life Technologies) and penicillin-streptomycin (Life Technologies). Primary cultures were transfected with Lipofectamine2000 (Thermo Fisher Scientific) and a total of 1–2 μg of plasmid DNA per well, as described (Moruno-Manchon et al., 2017 (link); Moruno Manchon et al., 2015 (link); Moruno-Manchon et al., 2018 (link)).
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