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5 protocols using ab109443

1

Immunohistochemical Analysis of Spinal Cord Tissue

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The paraffin-embedded sections (4 μm) of the spinal cords were mounted on glass slides. IHC analysis of the sections was performed using an automated slide preparation system (Benchmark XT; Ventana Medical Systems Inc., Tucson, AZ, USA). Deparaffinization, epitope retrieval, and immunostaining were performed using cell conditioning solutions and the BMK ultraVIEW diaminobenzidine detection system (Ventana Medical Systems Inc., Tucson, AZ), following the manufacturer’s instructions. The tissue sections were stained with anti-CD3 (#ab16669, Abcam), anti-CD68 (#ab125212, Abcam), and anti-PAX5 (#ab109443, Abcam) primary antibodies. The positive signals were amplified using ultraVIEW copper. The sections were counterstained with hematoxylin and bluing reagent. The number of CD3-, CD68-, and PAX5-immunoreactive cells in the white matter and pia mater of the spinal cord was examined using a light microscope and normalized to the total area of white matter and pia mater.
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2

Western Blot Analysis of PAX5 and β-catenin

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Total proteins were extracted from indicated CC cells using RIPA buffer, and then isolated by 10% SDS‐PAGE. Subsequently, the target proteins were transferred into PVDF membranes followed by the incubation of non‐fat dry milk (5%) for 2 hours. Next, the membranes were probed by primary antibodies that against PAX5 (1:5000, ab109443, Abcam) and β‐catenin (1:5000, #9581, Cell Signaling Technology) for 24 hours, followed by secondary antibody incubation for 2 hours. The bands were visualized by chemiluminescence.
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3

Apoptotic Signaling Pathway Evaluation

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WB analysis was performed as described previously.[35 (link)] The antibodies used in the experiments were rabbit anti-PAX5 (#12709, 1:1000), mouse p53 (1C12) (#2524, 1:1000), rabbit poly adenosine disphosphate-ribose polymerase (PARP) (46D11) (#9532, 1:1000), rabbit anti-caspase-3 (#9661, 1:1000), rabbit anti-caspase-7 (#8438, 1:1000), rabbit anti-caspase-8 (#9496, 1:1000), rabbit anti-caspase-9 (#7237, 1:1000), PARP (#5625, 1:1000) (Cell Signaling Technology, Danvers, MA, USA); rabbit anti-p53 antibody (ab131442, 1:1000), rabbit anti-pro Caspase-3 antibody (ab32150, 1:1000), rabbit anti-pro Caspase-7 antibody (ab32067, 1:1000), rabbit anti-Pro Caspase-8 antibody (ab108333, 1:1000), rabbit anti-pro Caspase-9 (phospho T125) (ab138412, 1:500), and rabbit anti-PAX5 antibody (ab109443, 1:1000) (Abcam, Cambridge, UK). Rabbit anti-actin was used as a control (Cell Signaling Technology).
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4

Immunohistochemical Analysis of Lymphoid Tissues

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Formalin-fixed paraffin-embedded tissues were sectioned (4 μm) and stained with hematoxylin and eosin (H&E) for histological analysis or used for immunohistochemistry (IHC). For IHC, endogenous peroxidases were inactivated by 3% hydrogen peroxide and nonspecific signals were blocked by 1% BSA. Sections were incubated with the primary antibody: CD20 (1:200, #MA5-13141, Invitrogen), CD3 (1:200, #ab16669, Abcam), MECA-79 (1:100, #sc-19602, Santa Cruz), CD21 (1:100, #sc-13135, Santa Cruz), CD23 (1:100, #MA5-14572, Invitrogen), TCL1A (1:500, #ab108978, Abcam), PAX5 (1:1000, #ab109443, Abcam), TNFRSF13C (1:300, #ab168389, Abcam), CD79A (1:200, #ab79414, Abcam) at 4°C overnight, HRP-conjugated secondary antibody at 37°C for 1 h, and subsequently stained with DAB substrate. Counterstaining was performed with hematoxylin and mounted with a mounting medium.
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5

Western Blot Protein Analysis

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Cells with RIPA buffer added were lysed on ice for 40 min. BCA Protein Assay kit (Beyotime, Shanghai, China) was used to determine total protein concentration. The proteins were separated in electrophoresis solution at 200 V and transferred to PVDF membrane (Thermo Fisher Scientific, Waltham, MA, USA). PVDF membranes were incubated with PAX5 antibody (1:1000, ab109443, Abcam, USA) and GAPDH antibody (1:1000 #5174P) in refrigerator overnight. Then, the cells were incubated with secondary antibody (LICOR, Nebraska, USA) for 1.5 h at room temperature. Next, the PVDF membrane results were obtained through the Odyssey system (Thermo Scientific, Waltham, MA, USA). The protein expression was analyzed by Image J software.
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