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11 protocols using cd45 pe

1

Multiparametric Flow Cytometry Profiling

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Dissociation of the cells was done by trypsin- EDTA (Gibco). 100,000 cells were taken for the detection of each marker. Cells were briefly centrifuged and resuspended in 45 μl cold FACS buffer. The following conjugated antibodies were added for 30 minutes on ice: CD90.1-FITC and the isotype control: Mouse IgG2a- FITC, CD-29 with the hamster IgGλ FITC isotype, CD-45-PE, CD11b/c- PE and CD34- PE, CD31- PE, all four with the isotype control REA (S)-PE, (all antibodies from Miltenyi Biotec). Cells were then washed twice with FACS buffer and analyzed using FACS Calibur system (Becton Dickinson).
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2

Characterization of Mesenchymal Stem Cells

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Cells were harvested by trypsinization (0.05% (w/v); Life Technologies, Cat. #15400-054) for 2 min, and the cell pellet was resuspended in PBS to a titer of 106/100 μL. The cell suspension was incubated with the following antibodies respectively. CD34-FITC (Miltenyi Biotec, Bergisch Gladbach, Germany, Cat. #130-098-142), CD45-PE (Miltenyi Biotec, Cat. #130-080-201), CD73-PE (Miltenyi Biotec, Cat. #130-112-060), CD90-FITC (Miltenyi Biotec, Cat. #130-095-403) and CD105-FITC (Miltenyi Biotec, Cat. #130-112-327). About 2 μL of each antibody (1:10 diluted according to the datasheet of the antibodies) per tube was added and incubated for 10 min in darkness at 2–8 °C. Cells were washed with PBS completely and resuspended in 1% (w/v) paraformaldehyde. Samples were run on a FC500MPL flow cytometer (Beckman Coulter, Brea, CA, USA) and the data were analyzed by FlowJo vX.0.7 software (FlowJo LLC, Ashland, OR, USA).
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3

Detecting Cancer Cells in Blood

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To investigate the feasibility of the selected aptamer to recognize cancer cells in real biological samples, 1 × 105 of 5-8F cells or A549 cells were added into 1 mL of peripheral blood samples which were collected from healthy volunteers. Meanwhile, to test the sensitivity of aptamer, different amounts of 5-8F cells (105, 104, 103 and 102) were dispersed in 1 mL of whole blood. After treated with red cell lysis buffer (Tiangen Biotech), the mixed cells (mainly WBC and 5-8F cells) were incubated with FITC-labeled aptamer and CD45-PE (Miltenyi Biotec) on ice for 0.5 h. The samples were analyzed by flow cytometry after incubation and being washed.
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4

Flow Cytometric Analysis of Lung Cells

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Cells were suspended in FACS buffer (2% FBS/DPBS), and incubated with respective antibodies. 7-Amino-Actinomycin D (7-AAD) (559925, BD Pharmingen, San Jose, CA) was used to gate live cells. To label cells, cells were incubated with antibodies for 30 minutes in the dark at 4°C, and then washed with D-PBS and pelleted by centrifugation at 1,500 RPM for 5 minutes. Cell pellets were resuspended in 2% paraformaldehyde, and analyzed by BD LSRFortessa cell analyzer (BD Biosciences, San Jose, CA). An average of 20,837 ± 9,403 cells were analyzed for controls, and 20,265 ± 7,222 cells were analyze for mutants per experiment. A minimum of three experiments were performed with lungs obtained from independent littermates. The following antibodies were used in flow cytometry: CD45-PE (130–102-781, Miltenyi Biotec, Somerville, MA), CD140a-BV421 (566293, BD Horizon, San Jose, CA); CD326-APC (563478, BD Pharmingen), CD31-FITC (561813, BD Pharmingen); alpha smooth muscle actin-FITC (ab8211, Abcam, Cambridge, MA).
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5

Isolation and Sorting of Primary Brown Adipocytes

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The primary brown adipocytes were prepared in accordance methods with the previous publication [20 (link)]. Floating adipocytes were separated from the SVF (Stromal Vascular Fraction) by centrifugation at 300 ×g for 3 min. SVF was sequentially filtered through 70 μm filters before staining with the following antibodies for 10 min on ice: Sca-1-APC (Miltenyi Biotec, 130-093-223), CD11b-FITC (Miltenyi Biotec, 130-081-201), and CD45-PE (Miltenyi Biotec, 130-091-610). Following antibody incubation, cells were washed, centrifuged at 300 ×g for 10 min, and sorted with a BD FACS Aria (BD Biosciences, CA, USA). Data analysis was performed using BD FACS Diva software.
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6

Characterization of Pluripotent Stem Cells

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The cells were detached, dissociated into single cells using dispase (Sigma-Aldrich), and resuspended in fluorescence-activated cell sorting (FACS) buffer (phosphate-buffered saline PBS, 1% BSA; 5 × 105 cells/100 μl FACS buffer). For cell-surface staining the cells were stained with primary antibodies CD73-PE (130-095-182, Miltenyi), CD105-FITC (130-094-926, Miltenyi), CD90- PE-VIO770 (130-099-295, Miltenyi), CD45-PE (130-098-141, Miltenyi), CD34-FITC (130-098-139, Miltenyi), CD24-FITC (130-098-861, Miltenyi), SSEA4-PE (FAB1435P, R&D), and TRA1-60-PE (09-0009, Stemgent) for 1 hour at 4 °C. For intracellular FACS staining, i.e. OCT4-A (130-105-606, Miltenyi) and OCT4-B (IC1759P, R&D), the cells were washed once in FACS buffer, fixed for 10 min in 0.01% paraformaldehyde (PFA), washed twice with PBS, resuspended in permeabilization buffer (PBS, 1% Triton) and stained as describe above. Cells were then washed twice with PBS, resuspended in FACS buffer and analysed by FACScalibur flow cytometry (CyAn ADP, Beckman Coulter). Collected data were analyzed with the Flowjo v.10 software package (Treestar, Ashland, OR, USA). Negative control was immunoglobulin G (IgG) primary antibody-specific isotypes.
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7

Multiparametric Flow Cytometry for Characterizing Human iPSCs and Derived Cell Types

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Human iPSCs or derived‐EBs were dissociated to into a single‐cell suspension by TrypLE (Life Technologies, Carlsbad, CA), and washed with a buffer for FACS (PBS plus 1% FBS and 1 mM EDTA). The cells were resuspended in the FACS buffer, and labeled with fluorochrome‐conjugated anti‐human CD34‐APC (Miltenyi Biotec, #130‐090‐954), CD45‐PE (Miltenyi Biotec, #130‐080‐201), CD45‐ Brilliant Violet 605 (BioLegend, San Diego, CA, #304042), CD235a‐Pacific Blue (BioLegend, #349108) antibodies. Isotype‐matched control antibodies were used to determine the background staining. The erythrocyte enucleation was evaluated by DRAQ5 staining (Thermo Scientific, #62251, 1:2,000 dilution). To characterize human iPSCs, the primary antibodies anti‐human TRA‐1‐60 (Millipore, Billerica, MA, #MAB4360) and SSEA‐4 (Millipore, #MAB4303) were used. Their recognitions were detected by respective secondary antibodies anti‐mouse IgM‐Alexa Fluor 555 (Thermo Scientific, #A21426) and anti‐mouse IgG‐Alexa Fluor 555 (Thermo Scientific, #A21422). Flow cytometric analysis was performed on a FACSCalibur or LSR II analyzer (BD Biosciences). Data analysis was performed using FlowJo or FCS Express software.
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8

Purity Analysis of Isolated Cells by Flow Cytometry

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The purity of isolated cells was analysed by flow cytometry on a BD Accuri C6 (BD Biosciences, Heidelberg, Germany). The 106 cells were resuspended in 100 µL of MACs buffer and stained with 2 µL of anti-human CD14-FITC, 2 µL of CD45-PE, and 2 µL of propidium iodide solution (Miltenyi Biotech, Bergisch Gladbach, Germany) for 30 min in the dark at 4 °C. Conjugation with CD14-FITC antibody binds to classical monocytes which present the CD14 antigen, while conjugation with CD45-PE antibody binds to all human cells of hematopoietic origin, with the exception of erythrocytes and platelets. Propidium iodide was used to exclude the dead cells out of the cell analysis. The cells were centrifuged at 300× g for 10 min and resuspended in 500 µL of PBS for flow cytometric determination of purity. The analysis was carried out with BD Accuri C6 software (BD Biosciences, Heidelberg, Germany).
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9

Multicolor Flow Cytometry for Immune Cell Profiling

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The immune cells isolated from PPs were subjected to staining with a panel of immune cell markers ((BD Biosciences, San Jose, CA): CD11b–PE-Cy7 (Cat #561098), CD11c-APC-Cy7 (Cat #561241), B220-APC (Cat #561880), CD8-V450 (Cat #560471), CD4-PerCP-Cy5.5 (Cat #561115)) and CD45-PE (Cat #130–101-952, Miltenyi Biotech, Auburn, CA). The cells were blocked with Fc blocker (BD Biosciences) in 1% FBS in 1x PBS buffer on ice for 15 minutes and stained for different markers on ice for 20 minutes. The cells were washed with 1x PBS and analyzed for immune marker expression by flow cytometry CD45 expression was assessed using a MACSQuant Analyzer (Miltenyi Biotech). Multicolor immune cell markers profiles were acquired using a BD Biosciences Fortessa LSR machine. Data were analyzed using the FlowJo software package (10.4.2).
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10

Flow Cytometry Analysis of Immune Cells

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The differential immune cell count was determined by using either NovoCyte or Beckman Coulter CytoFLEX flow cytometers and analyzed with NovoExpress (Acea Biosciences, USA) or CytExpert software (Beckman Coulter, USA). Differential immune cell counts were performed as previously described (Chan et al. 2016 ). Leukocytes were identified as CD45+, alveolar macrophages as CD11c+Siglec-F+, eosinophils as CD11cSiglec-F+, neutrophils as GR-1+CD11b+ or Ly-6G+CD11b+, B cells as CD3/CD19+ and T cells as CD3+/CD19 cells. All antibodies were from Miltenyi Biotech: CD45-VioBlue (130–110-802), CD45-PE (130–110-797), CD64-APC-Vio770 (130–118-685), Siglec-F-PE-Vio770 (130–112-334), Siglec-F-APC (130–102-241), CD11b-PE-Vio615 (130–113-807), CD11b-FITC (130–098-085), CD11c-PE-PerCP700 (130–110-842), CD11c-PE (130–102-799), Ly-6G-PerCP700 (130–117-500), Gr-1-PE (130–112-306), Gr-1-APC (130–102-833), CD3-APC-Vio770 (130–119-793), CD19-PE-Vio770 (130–111-885), Annexin-V-PE (130–118-363), and Viobility 405/520 Fixable Dye (130–109-814).
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