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2 protocols using antibody against β actin or gapdh

1

Quantifying Protein Expressions via Western Blot

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Expressions of proteins were quantified by western blot analysis as described previously (33 (link)–35 (link)). Whole tissue proteins were extracted from a segment of large intestine by using radioimmunoprecipitation assay (RIPA) lysis buffer (50 mM Tris-HCl, pH 8.0, 150 mM NaCl, 5 mM EDTA, 1% NP-40, 0.5% sodium deoxycholate, and 0.1% SDS) supplemented with protease inhibitor cocktail (Sigma-Aldrich), 1 mM phenylmethane sulfonyl fluoride (PMSF) (Sigma-Aldrich), and phosphatase inhibitor cocktails 2 and 3 (Sigma-Aldrich). Protein concentrations were determined by using the bicinchoninic acid assay (BCA, ThermoFisher). Protein samples were resolved on NuPAGE 4-12% Bis-Tris gels (Life technologies), and immunoblot analyses were performed using antibodies against phosphorylated α-syn at serine 129 (1:2000; Abcam) or α-syn (1:2000; Abcam). An antibody against β-actin or GAPDH (1:5000; Cell Signaling Technology) was included to monitor loading errors. The intensity of the western blot signals was quantitated using ImageJ software (NIH, Bethesda, MD, USA), and the densitometry analyses are presented as the ratio of protein/β-actin protein, and are compared with controls and normalized to 1.
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2

Western Blot Analysis of Phagocyte Oxidase

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Whole cell proteins were extracted from cultured cells in radioimmunoprecipitation assay (RIPA) lysis buffer (50 mM Tris-HCl, pH 8.0, 150 mM NaCl, 5 mM EDTA, 1% NP-40, 0.5% sodium deoxycholate, 0.1% SDS, and protease inhibitor cocktail) and heated to 95°C for 10 min. Protein concentrations were determined using the biocinchoninic acid assay (BCA, ThermoFisher). Protein samples were resolved on NuPAGE 4–12% Bis-Tris gels (life technologies), and immunoblot analyses were performed using antibodies against gp91phox (BD Biosciences, 1:1000) and p67phox (Cell Signaling, 1:1000). An antibody against β-actin or GAPDH (Cell Signaling, 1:5000) was included to monitor loading errors.
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