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19 protocols using bcl 2 associated x protein bax

1

Spinal Cord Protein Expression Analysis

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The spinal cord tissues were taken out from liquid nitrogen, lysed in RIPA lysis buffer, containing protease inhibitor, for 30 min and centrifuged to obtain the supernatant which was used to determine the protein concentration. After SDS-PAGE, the proteins were transferred onto a membrane, sealed and incubated overnight at 4°C with antibodies against NF-κB (Abcam, USA), p-NF-κB (Abcam, USA), B-cell lymphoma-2 (Bcl-2) (Abcam, USA), Bcl-2-associated X protein (Bax) (Abcam, USA), phosphatidylinositol 3-kinase (PI3K) (Abcam, USA), protein kinase B (Akt) (Abcam, USA), phosphorylated (p)-Akt (Abcam, USA), heme oxygenase-1 (HO-1) (Abcam, USA), Nrf2 (Abcam, USA), trithorax-1 (TRX-1) (Abcam, USA), Raf-1 (Abcam, USA), MEK (Abcam, USA), ERK (Abcam, USA), p-MEK (Abcam, USA), p-ERK (Abcam, USA) and glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (Abcam, USA) (diluted at 1:1000). Next, the PVDF membrane (Sigma, USA) was cleansed in TBST and incubated with horseradish peroxidase-labeled secondary antibodies at room temperature for 2 h. Finally, the color of the proteins was developed using an ECL kit and gel imaging system, and the absorbance analyzed by Image Tools.
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2

Protein Extraction and Western Blot Analysis

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Total proteins were extracted using RIPA buffer (Beyotime) and quantified using BCA Kit (Beyotime). The equivalent amount of protein was isolated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) gel and transferred onto polyvinylidene fluoride (PVDF) membranes (Millipore, Billerica, MA, USA). Then, the membranes were closed with 5% non-fat milk and incubated with the primary antibodies against caspase 3 (1:1000, Beyotime), B-cell lymphoma-2 (Bcl-2; 1:2000, Abcam, Cambridge, MA, USA), Bcl-2-associated x protein (Bax; 1:5000, Abcam), E-cadherin (1:1000, Abcam), Vimentin (1:2000, Abcam), FOXP2 (1:1000, Abcam), proliferating cell nuclear antigen (PCNA; 1:5000, Abcam) or GAPDH (1:5000, Abcam) at 4°C overnight. After incubated with the secondary antibody (1:2000, Abcam) for 1 h, the membranes were treated with enhanced chemiluminescence reagent (Beyotime) to visualize the protein signals.
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3

Immunoblotting Analysis of Cellular Signaling

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Aliquots of protein extracts (20 μg) derived from HMDMs, HASMCs, HUVECs, and EA.hy926 cells were separated by 10% SDS‐PAGE and then immunoblotted with antibodies raised against the following proteins: KP‐10; GPR54 (LifeSpan BioSciences, Seattle, WA); phosphorylated protein kinase B (p‐Akt); phosphorylated extracellular signal‐regulated kinase 1 and 2 (ERK1/2); phosphorylated p38 (Cell Signaling Technology, Danvers, MA); cleaved caspase‐3 (R&D Systems, Inc, Minneapolis, MN); and Bcl‐2‐associated X protein (Bax; Abcam, Cambridge, MA). Other antibodies used were same as described previously.19, 20, 21, 22, 23
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4

DSS-Induced Mouse Colitis Model

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ART (SA9720) was purchased from Solarbio Life Sciences (Beijing, China). TRIzol Reagent (cat. no. 15596026; Thermo Fisher Scientific, Inc.) was used to extract the total RNA. The 2X Taq PCR Master Mix was obtained from Beijing Baiao Laibo Technology Co., Ltd. (Beijing, China). Western blot analysis, hematoxylin and eosin (H&E) staining, cell RIPA lysis buffer solution was purchased from Beyotime Institute of Biotechnology and ELISA assay kits were purchased from Abcam and R&D Systems China Co., Ltd. The TLR4, NF-κB p65, phosphorylated (p)-p38, Bcl-2, Bcl-2-associated X protein (Bax) and caspase-9 primary antibodies, and the horseradish peroxidase-conjugated goat anti-rabbit/mouse secondary antibodies were obtained from Abcam or Cell Signaling Technology, Inc. Lipopolysaccharide (LPS; from Escherichia coli 0111:B4; L2630) and DSS (D4911) powder were purchased from Sigma-Aldrich (Merck KGaA, Darmstadt, Germany). The compound 5-aminosalicylic acid (5-ASA) was purchased from Tokyo Kasei Kogyo Co., Ltd.
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5

Western Blot Analysis of Apoptosis Markers

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NP-40 buffer (Beyotime, Shanghai, China) was firstly employed to lyse cells, and lysates were mixed with loading buffer (Thermo Fisher). The mixture was then boiled in boiling water. After that, lysates were loaded by 15% bis-tris-acrylamide gel (Thermo Fisher). The protein bands were electrotransferred onto nitrocellulose membranes (Membrane Solutions, Shanghai, China), which were then immersed in 8% defatted milk (Solarbio). Then, the membranes were incubated with primary antibodies against B-cell lymphoma-2 (Bcl-2) (1:1000; Abcam, Cambridge, UK), BCL2-associated x protein (Bax) (1:5000; Abcam), Cleaved caspase 3 (c-caspase 3; 1:5000; Abcam), pro-caspase 3 (p-caspase 3; 1:2000; Abcam), BRD4 (1:800; Abcam) and β-actin (1:1000; Abcam), respectively. Afterwards, secondary antibody against IgG H&L (Abcam; 1:8000) was utilized to incubate the membranes. Finally, the protein bands were visualized by dropwise adding eyoECL Plus (Beyotime) onto the membranes. β-actin was employed as a control.
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6

Western Blot Characterization of C28/I2 Cells

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After the treated C28/I2 cells were harvested, 30 μg of protein was extracted by RIPA lysis buffer (Beyotime, Shanghai, China), separated on SDS-PAGE gel and then transferred to polyvinylidene difluoride (PVDF, Millipore, Bedford, MA, USA) membranes. Subsequently, the membranes were immersed in 5% nonfat milk for 2 h and incubated with primary antibodies against B cell lymphoma-2 (Bcl-2, 1:1,000, Abcam, Cambridge, MA, USA), Bcl-2-associated X protein (Bax, 1:2,000, Abcam), SOX11 (1:2,000, Abcam), phosphorylation-P65 (p-P65, 1:1,000, Thermo Fisher Scientific), P65 (5 µg/mL, Thermo Fisher Scientific), IkB-α (1:2,000, Abcam), p-IkB-α (1:3,000, Abcam), Toll-like receptor 4 (TLR4, 1:1,000, Abcam), or GAPDH (1:3,000, Abcam) at 4°C overnight. The membranes were then probed with a secondary antibody conjugated with horseradish peroxidase (1:5,000, Abcam) for 1 h at 37°C. The blots were visualized by RapidStep ECL Reagent (Millipore Corp., Billerica, MA, United States), and the results were observed using Bio-Rad ChemiDoc XRS + Chemiluminescence Imaging System.
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7

Western Blot Analysis of Apoptosis Markers

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OGCs in different groups were collected and lysed in radioimmunoprecipitation assay (RIPA) buffer (Solarbio) containing 1 mM phenylmethanesulfonyl fluoride (PMSF) (Solarbio) at 4 °C for 30 min. The protein concentration was determined with a BCA Protein Assay Kit. Up to 50 µg of protein was electrophoresed on 12% SDS-polyacrylamide gels and transferred onto polyvinylidene difluoride (PVDF) membranes (Millipore), which were blocked with 5% nonfat dry milk (BD Biosciences) for 1 h at room temperature. The membranes were then blotted with primary antibodies at 4 °C overnight. The following primary antibodies were used: β-actin (1:1,000, Proteintech, Rosemont, IL, USA), B cell lymphoma 2 protein (Bcl-2, 1:1,000, Cell Signaling Technology), Bcl-2-associated X protein (Bax, 1:2,000, Abcam), caspase-3 (1:1000, Cell Signaling Technology), cleaved caspase-3 (1:1,000, Cell Signaling Technology) and cleaved poly-ADP-ribose polymerase (cleaved PARP, 1:250, Abcam). Then, the PVDF membrane was washed 3 times with Tris-buffered saline/Tween (Solarbio) and incubated with HRP-conjugated secondary antibody (1:10,000, ZSGB-BIO) for 70 min at room temperature. Detection was performed using Luminata western HRP substrate (Millipore). The results were obtained with a LI-COR 3600 instrument (LI-COR Biosciences, Lincoln, NE, USA) and analysed with an Image Studio Digits Version 4.0 system; n = 5.
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8

Western Blot Protein Analysis

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Cells at 80% confluence were washed three times with PBS. RIPA buffer was added to extract the total protein, and equal amounts of protein were loaded onto 12% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) gels for protein separation. Then, proteins were transferred onto nitrocellulose membranes. The membranes were blocked with 5% nonfat dried milk for 3 h and incubated with primary antibodies (p53 at 1:1000, p-AKT [CST, USA] at 1:800, total AKT [CST, USA] at 1:800, B-cell lymphoma-2 [Bcl-2] [Abcam, UK] at 1:1000, Bcl-2 associated X protein [Bax] [Abcam, UK] at 1:1000, caspase-3 [Abcam, UK] at 1:1000, and iNOS [CST, USA] at 1:1,000) overnight at 4°C. After being washed in Tris-buffered saline (pH 7.2) containing 0.05% Tween 20, the membranes were incubated with the secondary antibody for 2 h at room temperature. Finally, the membranes were washed, and ECL chemiluminescence reagents (Amersham Pharmacia Biotech, Japan) were used to detect the proteins. The quantification of band intensity was performed using Quantity One software (Bio-Rad, Hercules, CA, USA).
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9

Western Blot Analysis of Brain Tissue

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Mouse brains were obtained under deep anesthesia 1 and 3 days after surgery, and the ipsilateral hemisphere was used for Western blot analysis. For cells and brain tissue, the lysates were prepared using RIPA lysis buffer (Millipore) supplemented with a protease inhibitor cocktail (Roche, Basel, Switzerland). The Western blot protocol was performed as previously described [21 (link)]. The primary antibodies used were iNOS (1:500; Abcam), Arginase-1(Arg-1; 1:500; Santa Cruz), CD206 (1:800, Abcam), LC3B (1:1000, Sigma-Aldrich), LAMP2 (1:500; Millipore), phospho-mTOR (Ser 2448) (p-mTOR; 1:500; Cell Signaling Technology, Beverly, MA, USA), mTOR (1:1000, Cell Signaling Technology), FLAG (1:1000; Abcam), caspase3 (cas3; 1:500, Cell Signaling Technology), BCL2-associated X protein (bax; 1:1000; Abcam), B cell lymphoma 2 (bcl2;1:500; Cell Signaling Technology), GAPDH (1:1000; Santa Cruz), and β-actin (1:1000; Santa Cruz). The immunoblots were detected using an enhanced chemiluminescence kit (FD Technology, Shanghai, China) and obtained using an imaging system (Bio-Rad, Hercules, CA, USA) and then analyzed by ImageJ software.
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10

Signaling Pathways in Cardioprotection

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DOX was purchased from Haizheng Pfizer Pharmaceutical Co., Ltd. Levosimendan was obtained from Orion Corporation, Espoo, Finland. The following primary antibodies were purchased from Cell Signaling Technology (Boston, MA, USA): Bcl-2-associated X protein (BAX; 1 : 1000), c-caspase-3 (1 : 1000), PTEN (1 : 1000), P-Akt (1 : 1000), T-Akt (1 : 1000), and glyceraldehyde-3-phosphate dehydrogenase (GAPDH, 1 : 1000), and B-cell lymphoma-2 (Bcl-2) (1 : 1000) was purchased from Abcam. Akt inhibitor (Akt i) was purchased from Sigma-Aldrich (St. Louis, MO, USA). A goat anti-rabbit secondary antibody was purchased from LI-COR Biosciences (Lincoln, USA). The BCA protein assay kit was obtained from Dōjindo Laboratories (Kumamoto, Japan).
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