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Potato dextrose agar pda

Manufactured by Condalab
Sourced in Spain

Potato dextrose agar (PDA) is a general-purpose microbial growth medium. It is composed of infusion from potatoes, dextrose, and agar. PDA supports the growth of a wide range of fungi and some bacteria.

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6 protocols using potato dextrose agar pda

1

Antifungal Activity Screening of Isolates

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The antifungal activity of the selected isolates was tested by dual culture technique as previously described [20 (link)] in 9 cm in diameter Petri dishes, against six common fungal pathogens affecting grain cereals crops such as Alternaria spp., Botrytis cinerea, Fusarium oxysporum, Nigrospora oryzae, Pleospora herbarum and Rhizoctonia solani. The antifungal activity was quantified by calculating the inhibition index (I index): I index (%) = [1 − (Ra − R)/(Rc − R)] × 100; where Ra is the radius of the fungal colony opposite the bacterial colony, Rc is the maximum radius of the fungal colony (farther away from the bacterial effect) and R is the radius of the agar plug containing the fungi (3.5 mm). I index values were calculated for every pathogen when the Rc value of the negative control (fungal pathogen growing in the absence of antagonist PSB) was 4.5 cm, which corresponds to a total growth in the Petri dish. Every PSB-fungal combination was tested on International Streptomyces Project 5 (ISP5) and 7 (ISP7) [21 (link)] (Shriling and Gottlieb, 1966), Potato Dextrose Agar (PDA; Condalab, Torrejón de Ardoz, Spain), Tryptic Soy Agar (TSA; Condalab, Torrejón de Ardoz, Spain) and Yeast-Extract Dextrose (YED; Condalab, Torrejón de Ardoz, Spain) agar media and the assays were carried out by triplicate.
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2

Epiphytic Population Quantification in Cold Stored Fruit

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During cold storage, the epiphytic population of stamens was assessed bimonthly; for each treatment and replicate, two fruit were randomly selected, and twelve stamens per fruit were plated on a semi-selective Potato Dextrose Agar (PDA; Conda, Madrid, Spain) amended with 250 mg L−1 of both streptomycin and ampicillin (Sigma-Aldrich, St. Louis, MI, USA). Three technical replicates per fruit were incubated at 24 ± 1 °C for five days in the dark. According to Mincuzzi et al. [11 (link)] and Barnett and Hunter [18 ], colonies were morphologically identified at the genus level. The number of colonies (CN) was rated to the total amount of stamens (SN) per plate (P) to evaluate the epiphytic population (EP). Final values were expressed as percentages as follows:
EP values were averaged among technical replicates, and, considering technical replicates and randomized blocks, standard deviations were appraised. Sampled fruit were marked and replaced in the box, maintaining the original position.
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3

Biochemical Analysis of Methionine Metabolism

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The chemicals and reagents used in this study came from the following sources: L-methionine derived from (Merk, Germany). Sodium methanethiolate was purchased from Sigma-Aldrich, Commassi Brilliant Blue G-250, 5,5-Dithiobis-2-nitrobenzoicacid (DTNB), pyridoxal-5-phosphate (PLP), and bovine serum albumin (BSA) (Sigma, St. Louis, USA). Pharmacia Biotechnology provided Sephadex G-100 and DEAE-cellulose (Sweden). Potato dextrose agar (PDA) (Conda lab, Spain). The American Type Culture Collection provided cancer and normal cells for this study (ATCC, Rockville, MD, USA). The rest of the compounds are of the highest analytical quality.
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4

Fungal Isolation from Fruit Lesions

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Fruits samples were processed for the isolation of fungal causal agents. Causal fungi were isolated from lesions using a single conidial isolation on 1.0% water agar containing 0.5 mg/l streptomycin under a stereo microscope according to the method described by Choi et al. [29 ]. The isolated plates were incubated at 25 °C in darkness for 24–48 h, and the germinated conidia were then transferred onto potato dextrose agar (PDA; Conda, Madrid, Spain) containing 0.5 mg/L streptomycin. Pure fungal isolates were deposited in the culture collection of the Sustainable Development of Biological Resources, Faculty of Science, Chiang Mai University (SDBR-CMU), Chiang Mai Province, Thailand.
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5

Fungal Melanin Extraction from Black Fungus

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The black fungus Exophiala mesophila strain IRTA-M2-F10 (culture collection at the Institute of Agrifood Research and Technology, Spain) isolated previously from biodeteriorated glued ceramics was selected the source of fungal melanin because of its tolerance to heavy metals and easy cultivation under laboratory conditions (Medina-Armijo et al., 2024 (link)). Active cultures of this fungus were routinely maintained on potato dextrose agar (PDA; Condalab, Spain) incubated at 25°C in the darkness. Ten agar pre-grown fungal colonies of 5 to 7 mm in diameter (after about three weeks of incubation) were transferred into 250 mL of liquid medium that contained macronutrients (4.5 g KH2PO4, 0.5 g K2HPO4, 2.0 g NH4Cl, and 0.1 mg MgSO4 7H2O per liter), 2 mL of a stock solution of micronutrients (120 mg FeCl3, 50 mg H3BO3, 10 mg CuSO4 5H2O, 10 mg KI, 45 mg MnSO4 · H2O, 20 mg Na2MoO4 H2O, 75 mg ZnSO4 H2O, 50 mg CoCl2 6H2O, 20 mg AlK(SO4)2 12H2O, 13.25 g CaCl2 H2O, and 10 g NaCl, per liter), and yeast extract (4 g L−1) as the carbon and energy source. The incubation of this liquid culture was performed under dark conditions at 25°C on a horizontal shaker (80 rpm) and was maintained for three weeks. Fungal biomass was then harvested by centrifugation (18 g for 20 min) and used immediately for melanin extraction.
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6

Production of Fungal Melanin-based Colors

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The pure mycelia of four trimitic hyphal species (Ganoderma fornicatum CMU-NK0524; GF, Ganoderma williamsianum CMU-NK0540; GW, Lentinus sajor-caju CMU-NK0427; LS, and Trametes coccinea CMU-AM005; TC) along with one monomitic hyphal species (Schizophyllum commune CMU-S01; SC) were derived from the culture collection of the Research Center of Microbial Diversity and Sustainable Utilization (RCMU), and the Sustainable Development of Biological Resources Laboratory (SDBR-CMU), Faculty of Science, Chiang Mai University, Thailand. These species have been previously studied and have been reported to show potential for producing MBCs with several great properties, unique characteristics, and beautiful colors without the use of added pigments [11 (link),16 (link)]. All fungal species were grown for 7 days at 30 °C on potato dextrose agar (PDA; Conda, Madrid, Spain).
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