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Alexa fluor 488 conjugated donkey anti goat antibody

Manufactured by Thermo Fisher Scientific
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The Alexa Fluor 488-conjugated donkey anti-goat antibody is a secondary antibody designed for use in immunofluorescence assays. It is conjugated to the Alexa Fluor 488 fluorescent dye, which emits green fluorescence when excited. This antibody is specific for goat primary antibodies and can be used to detect and visualize target proteins or other biomolecules in biological samples.

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8 protocols using alexa fluor 488 conjugated donkey anti goat antibody

1

Presynaptic Puncta Analysis in P21 Mouse Brains

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For presynaptic puncta analysis, mouse brains were collected at P21. After brain fixation and coronal sectioning, brain sections were blocked with 1% bovine serum albumin, 5% normal donkey serum, and 0.3% Triton X‐100 for 1 h at room temperature (RT). Sections were then incubated overnight with mouse monoclonal anti‐VGAT (1 : 500; Synaptic Systems, Göttingen, Germany), goat polyclonal anti‐VGluT1 (1 : 500; Frontier Institute, Ishikari, Hokkaido, Japan), and rabbit polyclonal anti‐VGluT2 (1 : 500; Frontier Institute) diluted in the blocking solution at 4 °C. After washing with PBS, tissue sections were incubated with secondary antibodies, an Alexa Fluor 555‐conjugated donkey anti‐mouse antibody (1 : 500; Molecular Probes, Eugene, OR, USA), an Alexa Fluor 488‐conjugated donkey anti‐goat antibody (1 : 500; Molecular Probes), and an Alexa Fluor 647‐conjugated donkey anti‐rabbit antibody (1 : 500; Molecular Probes) for 2 h at RT, and stained with Hoechst 33342 (Thermo Fisher Scientific, Waltham, MA, USA).
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2

Immunofluorescence Assay for DNA Damage

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Cells were cultured and treated on chamber slides. Seventeen hours after irradiation, cover slips were rinsed, and cells were fixed in 4% paraformaldehyde and permeablized in methanol for 20 minutes. Cells were subsequently washed and blocked in PBS containing 2% bovine serum albumin for 1 hour. Primary antibody against γH2AX (Cell Signaling Technology) was applied to the cells and incubated overnight. Secondary AlexaFluor 488-conjugated donkey anti-goat antibody (Molecular Probes, Eugene, OR, USA) was applied and incubated for 1 hour. Nuclei were counterstained with 4′,6-diamidino-2-phenylindole (DAPI) by incubation of cells in 1 μg/mL DAPI for 5 minutes. Slides were examined on a ZeissAxio Scope.A1 Imager fluorescence microscope. Images were captured using AxioCamMRc5 and AxioVision v.4.4 acquisition software (Carl Zeiss, Jena, Germany).
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3

Immunofluorescence Staining of VEGF, CD31, EphA2, and HIF1α

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Cryosections were performed as described by Fischer et al. [15 ]. Slides were incubated overnight with primary antibody against VEGF, CD31, EphA2, and HIF1α (Cell Signaling Technology, Danvers, MA), followed by incubation with secondary Alexa Fluor 488-conjugated donkey anti-goat antibody (Molecular Probes, Eugene, OR) for 1 hour. Slides were treated with 1 μg/mL 4′,6-diamidino-2-phenylindole for 5 minutes to counterstain nuclei and examined on an Axio Scope A1 Microscope (Carl Zeiss, Gottingen, Germany). Images were captured and acquired using AxioCam MRc5 and acquisition software AxioVision v.4.4 (Carl Zeiss).
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4

Retinal Vasculature Immunostaining Protocol

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Immunostaining protocol was adapted from a published protocol [19 (link)]. Mouse eyes were enucleated and fixed in 4% PFA at room temperature for 15 minutes, then transferred to PBS for 10 minutes. After whole eye fixation, retinas were dissected and fixed with cold methanol (-20°C) for 20 minutes, followed by blocking in Perm/Block solution (PBS + 0.3% Triton + 0.5% BSA + 5% goat serum). Goat anti-mouse PECAM-1 (1:50) (R&D Systems, Fischer Scientific, #AF3628) combined with Alexa Fluor 594-conjugated isolectin GS B4 (1:200) (Invitrogen, #I21413) in Perm/Block solution was used for primary antibody incubation, followed by Alexa Fluor 488-conjugated donkey anti-goat antibody (1:1000) (Invitrogen, #A32814) for secondary antibody incubation. After extensive washing, retinas were mounted using ProLong Glass Antifade (Invitrogen) onto a coverslip and allowed to set overnight. Immunofluorescence was captured via Olympus Provis AX-70 and Leica TCS SP8 Confocal microscopes. The fluorescence intensity was quantified using ImageJ software.
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5

Analysis of Cell-Cell Fusion in BeWo Cells

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Glass coverslips were placed in a 24-well plate and 2 × 104 cells/500 μL of BeWo WT, BeWo KO, and BeWo KO-HtrA4 rescue cells were seeded. The cells were exposed to 50 μM forskolin or equal amounts of DMSO for 48 h. After treatment, the cells were fixed using 4% paraformaldehyde for 10 min at room temperature (RT) and washed twice with phosphate-buffered saline (PBS) for 2 min each time. The cells were then permeabilized with 0.2% triton X-100 for 1 min at RT, blocked with PBS containing 1% BSA for 1 h at RT, and incubated with E-cadherin and HCG antibodies (Table S3) at 4 °C overnight. After washing with PBS, the cells were incubated with Alexa-fluor-488-conjugated donkey anti-goat antibody (Invitrogen, Carlsbad, CA, USA) and Alexa-fluor-568-conjugated goat anti-rabbit antibody (Invitrogen, Carlsbad, CA, USA) at RT for 1 h. The cell-cell fusion was examined under a confocal microscopy (Zeiss LSM880, Carl Zeiss Microscopy GmbH, Munich, Germany).
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6

Immunofluorescence Analysis of Osteocalcin and PLEKHO1

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The bone specimens were fixed with 4% buffered formalin and embedded with O.C.T. after decalcification with 10% EDTA. The frozen sections (5 μm thickness) were cut in a freezing cryostat at −20 °C. The sections were air dried at room temperature, fixed in ice-cold acetone for 10 min, permeablilized with 0.1% Triton X-100 at room temperature for 20 min, and blocked in 5% donkey serum in PBS. The sections were then incubated overnight at 4 °C with the mixture of goat polyclonal osteocalcin antibody (Santa Cruz Biotechnology, Inc.), and rabbit polyclonal PLEKHO1 antibody (Santa Cruz Biotechnology, Inc.). Following three washes in PBS, the sections were incubated with the mixture of Alexa Fluor 488-conjugated donkey anti-goat antibody, and Alexa Fluor 568-conjugated donkey anti-rabbit antibody (Invitrogen) for 1 h. Negative control experiments were done by omitting the primary antibodies. The sections were mounted with the medium containing DAPI and then examined under a fluorescence microscope (DM6000B, Leica image analysis system) [30 (link),31 (link)] .
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7

Immunohistochemical Visualization of CRH

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Animals were anesthetized and transcardially perfused with saline followed by 4% paraformaldehyde in 0.1 M PBS (pH 7.4). Brains were removed, postfixed in 4% paraformaldehyde in PBS for 24 h at 4°C and sectioned on a vibrating microtome (VT1000S, Leica) into 50 μm thick coronal sections (stereotaxic coordinates: dorsoventral −8 mm, lateromedial ±0.4 mm, and anteroposterior −1.88 mm from bregma). Free-floating sections were washed in PBS and incubated in 5% normal donkey serum (NDS, Sigma-Aldrich) and 0.1% Triton X-100 (Sigma-Aldrich) in PBS for 1 h. They were then incubated (48 h, 4°C) in PBS containing goat anti-CRH antibodies (1:100; Santa Cruz Biotechnology: sc-1759). After several washes the sections were incubated in PBS with Alexa Fluor 488-conjugated donkey anti-goat antibodies (1:200, 2 h, Thermo Fisher Scientific). Finally, the sections were mounted onto gelatin-coated slides and coverslipped using PBS-buffered glycerol. The sections were analyzed and photographed using a Leica DM 6000 B microscope equipped with a digital camera (MBF CX9000, Williston, VT USA; Figure 1B).
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8

Immunocytochemistry of Murine ACC Neurons

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After 1–2 days in culture, except where noted, wt and GCaMP6f-expressing murine ACC were rinsed with phosphate-buffered saline (PBS) and fixed in 4% paraformaldehyde in PBS for 10 min. Cultures were blocked in PBS containing 0.1% Triton X-100 (PBST) and 10% fetal bovine serum (FBS) and incubated overnight at 4°C with antibodies against TH (rabbit, PA5-85167, ThermoFisher, Waltham, MA, USA), phenylethanolamine N-methyltransferase (PNMT) (rabbit, AB110, MilliporeSigma, Burlington, MA, USA), or S100β (rabbit, GA50461-2, Agilent, Santa Clara, CA, USA). For GCaMP6f-expressing cells, the overnight incubation included a green fluorescent protein (GFP) antibody (goat, 600-101-215, Rockland Immunochemicals, Pottstown, PA, USA). Primary antibodies were diluted 1:1000. Cells were then rinsed several times with PBS and incubated for one hour at room temperature in the dark with AlexaFluor 594-conjugated donkey-anti-rabbit and/or AlexaFluor 488-conjugated donkey anti-goat antibodies (ThermoFisher). Secondary antibodies were diluted 1:500 in 10% FBS in PBST that also contained 1 μg/ml bisbenzimide (Hoechst 33342; ThermoFisher) to label nuclei. Cells were rinsed with PBS and brightfield and fluorescence images were acquired using a Nikon TE 2000 epifluorescence microscope equipped with an iXonEM + DU-897 EMCCD camera (Andor).
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