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7 protocols using anti mouse antibodies

1

Antibody Validation for Cell Signaling

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The primary antibodies used in this study are listed as follows: anti-EGFR (sc-03; Santa Cruz Biotechnology Inc., Dallas, TX, USA), anti-Ki-67 (ab16667; Abcam, Cambridge, UK), anti-E-cadherin (ab1416; Abcam), antivi-mentin (ab92547; Abcam), anti-β-actin (sc-1616; Santa Cruz Biotechnology), and antigreen fluorescence protein (GFP; sc-8334; Santa Cruz Biotechnology). Antimouse antibodies (Santa Cruz Biotechnology) and antirabbit antibodies (Zhongshan Goldbridge Biotechnology, Beijing, China) were used for Western blot in this study.
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2

Protein Expression Analysis by Western Blot

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After being washed once with PBS, the product was harvested and solubilized in RIPA lysis buffer (ABCAm, ab156034, Waltham, MA USA) with protease inhibitor (Complete mini, Roche Diagnostic, Mannheim, Germany). Protein concentration was determined by BCA (Thermo Fisher Scientific, Ulm, Germany). Ten to fifty micrograms of protein extract were resolved on 10% SDS-PAGE and transferred onto PVDF membrane (Thermo Fisher Scientific, Dreieich, Germany). Primary antibody included PARP (Cell Signaling Technology, Danvers, MA, USA). GAPDH (Santa Cruz Biotechnology, Dallas, TX, USA) served as control. Second antibody used Anti-Rabbit (Santa Cruz Biotechnology, Dallas, TX, USA) and Anti-Mouse antibodies (Santa Cruz Biotechnology, Dallas, TX, USA). Detection was performed with ECL chemiluminescence reagent (Amersham Biosciences, Little Chalfont, UK).
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3

Protein Expression Analysis of AsPC-1 Cells

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After 72 h of siRNA treatment or 16 h of tBHQ treatment, AsPC-1 cells were lysed in 10 mM Tris–HCl (pH 7.0), 100 mM NaCl, 1 % triton X-100, 1 mM DTT, 20 μg/ml aprotinin, 2.5 μg/ml leupeptin, and 0.5 mM PMSF. Lysates were resolved on 10 % sodium dodecyl sulfate–polyacrylamide by gel electrophoresis (SDS-PAGE) and transferred onto 0.45 μm pore size Polyvinylidene fluoride (PVDF) membranes (Millipore, Bedford, MA), and immunoblotted with following antibodies: Cyclin B1 antibody (CST#4135, Cell Signaling Technology, Danvers, MA), Cyclin D1 (CST #2922, Cell Signaling Technology), NRF2 (sc-103032, Santa Cruz Biotechnology, Santa Cruz, CA), Erk-1 (sc-94, Santa Cruz Biotechnology), Cyclin A (sc-239, Santa Cruz Biotechnology). Horseradish peroxidase (HRP)-conjugated goat anti-rabbit (sc-2004, Santa Cruz Biotechnology) or anti-mouse antibodies (sc-2005, Santa Cruz Biotechnology) were used as secondary antibodies.
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4

Protein Expression Analysis in Porcine Tissues

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The various tissue samples of the pigs and Cells were split by radio immunoprecipitation assay (RIPA) buffer (Beyotime, China) add with protease inhibitor (Pierce, WA, USA). The total protein sample was pointed into and separated in the SDS-polyacrylamide gel. Then transferred it into a PVDF membrane (Millipore, Bedford, MA, USA). Nest, the membrane was blocked in 5% defatted milk for 2 h. After that, the membrane was incubated with primary antibodies at 4 °C overnight followed by a secondary antibody at room temperature for 1.5 h. Protein bands were exposure by chemiluminescence reagents (Millipore, Bedford, MA, USA) and quantified using the Image Lab Image Document. Following primary antibodies were used: PDGFRα (1:300; Boster, Wuhan, China), FABP4 (1:500; Santa Cruz Biotechnology, Dallas, TX, USA), β-actin (1:1000; Santa Cruz Biotechnology, Dallas, TX, USA), β-tubulin (1:500; Santa Cruz Biotechnology, Dallas, TX, USA). The secondary antibodies were anti-rabbit, anti-goat and anti-mouse antibodies (Santa Cruz Biotechnology, Dallas, TX, USA). The targeted proteins were detected using the Gel Doc XR System (Bio-Rad, Hercules, CA, USA) as the instructions of the manufacturer.
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5

Western Blot Analysis of BDNF and CREB

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The concentrations of proteins extracted with TRizol reagent (Thermo Fisher Scientific, Inc.) were determined using Bradford’s method with bovine serum albumin as a standard. Samples containing equal protein amounts and prestained molecular weight markers were separated by Tris-SDS-PAGE and transferred onto polyvinylidene fluoride membranes (0.45 µm, Merck Millipore). The membranes were blocked with 3% BSA in Tris-buffered saline with 0.05% Tween-20 for 1 h at room temperature, and incubated overnight at 4 °C with the following antibodies: rabbit polyclonal anti-brain-derived neurotrophic factor (BDNF; 1:3000; Abcam, Cambridge, MA, USA), rabbit monoclonal anti-cAMP response element binding protein (CREB; 1:2000; Abcam), rabbit monoclonal anti-Ser133-phosphorylated CREB (pCREB; 1:2000; Abcam), and mouse monoclonal anti-β-actin (1:5000; Santa Cruz Biotechnology, Dallas, TX, USA). Subsequently, the membranes were washed and incubated for 1 h at room temperature with secondary HRP-conjugated anti-rabbit (1:5000; Santa Cruz Biotechnology) or anti-mouse antibodies (1:10,000; Santa Cruz Biotechnology). Chemiluminescence detection was performed using the EzWestLumi plus kit (ATTO, Tokyo, Japan) and AE-9300 Ez-Capture (ATTO). Densitometric analyses were performed using the public domain NIH Image Program, ImageJ.
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6

Immunohistochemical Analysis of Signaling Pathways

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Formalin, hematoxylin, and eosin were acquired from Sigma Aldrich. Anti-β-catenin, lymphoid enhancer binding factor 1 (Lef-1), cyclin E, insulin-like growth factor 1 (IGF-1), vascular endothelial growth factor (VEGF), transforming growth factor beta (TGF-β), Sonic hedgehog (Shh), smoothened (Smo), and anti-mouse antibodies were purchased from Santa Cruz Biotechnology. Anticyclin D1, phospho-glycogen synthase kinase-3 beta (p-GSK-3β), and anti-rabbit antibodies were purchased from Cell Signaling Technology. All other reagents used in this study were procured from commercially available sources and were of the highest quality.
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7

Western Blotting of ABCB11 Protein

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Whole-cell extracts (see
Cell culture), scraped out and extracted using RIPA Lysis and Extraction Buffer, were run on 10% SDS-PAGE and transferred to a polyvinylidene difluoride membrane using a transfer apparatus following the standard protocols (Bio-Rad). After incubation with 5% nonfat milk in TBST (10 mM Tris, pH 8.0, 150 mM NaCl, 0.5% Tween 20) for 60 min, the membrane was washed once with TBST and incubated with rabbit antibodies against human ABCB11 (Affinity, Catalog #DF 9278) 1: 2000 dilution; human β-actin (Santa Cruz Cat.# SC4778), dilution 1:1000; 4°C overnight. The membrane was washed with TBST buffer and incubated with a 1:5000 dilution of horseradish peroxidase-conjugated anti-rabbit (Santa Cruz Cat# SC-2004)/anti-mouse antibodies (Cat.#SC-2005) for 2 h at room temperature. Blots were washed with TBST four times and developed with the ECL system (Bio-Rad, US Cat.#170-5060) according to the manufacturer’s protocols. Raw, uncropped images from western blotting are available as Underlying data
21 (link).
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