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Rna oligonucleotides

Manufactured by RiboBio
Sourced in China

RNA oligonucleotides are synthetic single-stranded RNA molecules. They are used as research tools in molecular biology, biochemistry, and genetics. RNA oligonucleotides can be designed to mimic or interfere with the function of naturally occurring RNA molecules, such as mRNA, tRNA, and miRNA.

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4 protocols using rna oligonucleotides

1

Transcriptional Regulation of gga-miR-451

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The full length of gga-miR-451 potential promoter region and 10 deletion fragments were amplified by PCR and sub-cloned into the KpnI/HindIII sites of the pGL3-basic vector (Promega, Madison, WI, USA). Seven promoter constructs containing site-specific mutations were generated by overlap-expression PCR. To construct transcription factors AhR and Arnt expression vectors, CDS of AhR and Arnt were amplified from cDNA derived from DF-1 cells and cloned into pCDNA3.1 (p-AhR, p-Arnt). The expression vectors were double-digested with HindIII and KpnI, and then cloned into the pCMV-C-HA vector (Beyotime, Shanghai, China). The recombinant plasmids were named pCMV-C-HA-AhR and pCMV-C-HA-Arnt, respectively. The primers are described in Table 1. All plasmids were verified by sequencing.
The sequences of all of the primers used in this study are shown in Table 1. RNA oligonucleotides were designed and synthesized by RIBOBIO (Guangdong, China) and are shown in Table 2.
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2

Renal Cell Carcinoma Molecular Regulation

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Human normal kidney cell (HK2), RCC cell lines 786-O, A498 and ACHN were obtained from the American Type Culture Collection (ATCC). Cells were cultured in DMEM medium with 10% FBS and 1% penicillin–streptomycin in 5% CO2 at 37°C. Cancer cells were seeded in six-well plates at a density of 1×105/well. miR-935 inhibitor, miRNA-935 mimic, IREB2 siRNA or their negative control were transfected into 780-O and A498 cells with Lipofectamine 2000 reagents (Thermo Fisher Scientific, Waltham, USA). RNA oligonucleotides were obtained from RiboBio (Guangzhou, China) as previous research.22 (link) Forty-eight hours later, the cells were prepared for further analysis.
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3

Electroporation-mediated miR-126 Exosome Loading

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miR-126 mimics and miR-126 inhibitor and negative control RNA-oligonucleotides were purchased from Guangzhou Ribobio, Guangzhou, China. Electroporation of RNA-oligonucleotides into EPC-derived exosomes was performed using 4D-Nucleofector System Manual (Lonza, Basil, Switzerland) according to the manufacture’s instruction. Briefly, 10 μg exosome was precipitated and resuspended in 90 μl electroporation buffer of Lonza Cell Line Nucleofector Kit (Lonza, Basel, Switzerland), then mixed with 10 μl miR-126 mimics, miR-126 inhibitor or negative control before the mixture was transferred into cold 0.2 cm electroporation cuvettes and electroporated at 150 V/100 μF. After remove the free-floating miRNA, exosomes were re-isolated using ultracentrifugation. The final pellet (exosome) was resuspended in PBS, and stored at − 80 °C. RT-qPCR was performed to investigate the expression level of miR-126 in exosomes.
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4

Transfection of RNA Oligonucleotides and Plasmids

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The RNA oligonucleotides (miR mimics, miR inhibitors, and siRNAs) were designed and synthesized by RiboBio Company (Guangzhou, China). The pCDNA3.1-CXCR3 plasmid was constructed and synthesized by Tsingke Biological Technology (Beijing, China). Lipofectamine 3000 was used for transfection following the manufacturer’s instructions. Further analysis or treatments were processed at least 48 h after transfection.
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