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5 protocols using cd19 pe cf594 clone hib19

1

Purification of CCR6+ Memory T Cells

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To sort purify CCR6+ memory T cells, total PBMCs from 6 healthy donors were stained with fluorophore-labeled antibodies; anti-CD3- APC-H7 (clone SK7; BD Biosciences; Cat# 560176), CD4- FITC (clone RPA-T4; Biolegend; Cat# 300506), CD8- APC (clone HIT8a; BD Biosciences; Cat# 566852), CD45RO- BV421 (clone UCHL1; BD Biolegend; Cat# 304224), CCR6- PE (clone 11A9; BD Biosciences; Cat# 559562), CD19- PE-CF594 (clone HIB19; BD Biosciences; Cat# 562294), CD14- BUV737 (clone M5E2; BD Biosciences; Cat# 612763) and CD56-PE-Cy7 (clone CMSSB; BD eBioscience; Cat# 25–0567-42) and 7AAD live dead stain (eBioscience; Cat# 00–6993-50). Sorting was performed on an Influxor FACS Vantagecell sorter (BD Bioscience).
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2

Phenotyping of P. falciparum-specific B cells

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PBMC were phenotyped using a LSRII flow cytometer (Becton-Dickinson Immuno Cytometry Systems, San Jose, USA) as described [39 (link)]. The following fluorochrome-conjugated monoclonal antibodies were used for B cell phenotyping: CD19 PE-CF594-clone HIB19, CD20 V450-clone L27, CD27 PE-Cy7-clone M-T271, and IgG FITC-clone G18-145 (all from BD). B cells specific for P. falciparum were identified utilizing Quantum dots (Invitrogen) conjugated to extract of schizont- and trophozoite-stage parasites as described in detail previously [38 (link)]. Proportions of B lymphocytes (defined as CD19+ cells) specific for P. falciparum (Pf+) were defined in the following cell compartments: IgG positive memory B cells (IgG+ MBC) (CD19+CD20+CD27+IgG+), IgG negative memory B cells (non-IgG+ MBC) (CD19+CD20+CD27+IgG), naïve B cells (CD19+CD20+CD27IgG), plasma cells/blasts (CD19+CD20CD27+IgG), and CD27 MBC, including atypical memory B cells (CD19+CD20+CD27IgG+). Data was processed using FLOWJO software (Tree Star Inc, San Carlos, CA, USA).
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3

Phenotyping of Activated B-Cells

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To determine the phenotype of B‐cells post‐stimulation, cells were stained with LIVE/DEAD™ Fixable Aqua Dead Cell Stain Kit (Thermo Fisher, Waltham, MA, USA) and then with anti‐human IgM BV605 (clone MHM88; Biolegend), IgG BV786 (clone G18‐145; BD), CD27 APC (clone 323; Biolegend), CD20 APC‐H7 (clone 2H7; BD), CD38 PE (clone HIT2; BD), CD19 PE‐CF594 (clone HIB19; BD), CD71 PE‐Cy7 (clone CY1G4; Biolegend), IgD BUV395 (clone IA6‐2; BD) and CD21 BUV737 (clone B‐Iy4; BD). The dump channel mix consisted of BV510‐labelled anti‐human CD3 (clone OKT3), CD10 (clone HI10a), CD14 (clone M5E2) and CD16 (clone 3G8), all from Biolegend. Samples were stained according to standard techniques and fixed briefly with 1% formaldehyde before acquiring data on an LSRFortessa flow cytometer (BD Biosciences). Data were analysed using FlowJo v10.5.3 (Tree Star, Inc., Ashland, OR, USA).
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4

Immunophenotyping of Plasmodium falciparum

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Immunophenotyping of P. falciparum was done according to the protocol described elsewhere [21 (link)]. Briefly, cryopreserved PBMCs were used together with Fc block and the following fluorochrome-conjugated monoclonal antibodies: CD19 PE-CF594-clone HIB19, CD20 V450-clone L27, CD27 PE-Cy7-clone M-T271 (all from BD), FcRL4 APC-clone 413D12 (Biolegend) and FITC-conjugated mouse anti-human IgG monoclonal antibody (BD Horizon). B cells specific for P. falciparum were identified utilizing carboxyl Quantum dots (Invitrogen) conjugated to extract of schizont- and trophozoite-stage parasites as described in detail by Lugaajju et al. [83 (link)]. The analysis was performed on a LSRII flow cytometer (Becton–Dickinson Immuno Cytometry Systems, San Jose, USA). To detect the proportion of B cells (defined as CD19+ cells) that were specific for P. falciparum, the cells were categorized as follows: IgG MBCs (CD19+CD20+CD27+FcRL4±IgG+), non-IgG+ MBCs (CD19+CD20+CD27+FcRL4±IgG−), naïve B cells (CD19+CD20+CD27−FcRL4±IgG−), plasma cells/blasts (CD19+CD20−CD27+FcRL4±IgG−), and atypical MBCs (CD19+CD20+CD27−FcRL4±IgG+). Data was processed using FLOWJO software (Tree Star Inc., San Carlos, and Ca, USA).
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5

Single-cell sorting of germinal center B cells

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Normal GC-cells from tonsil (one sample) were collected at the Ear-Nose-Throat clinic at the University Hospital in Umeå, Sweden. A single-cell suspension of the tonsil was prepared as previously described [31 (link)]. Before sorting, the cells were thawed and washed in sterile PBS supplemented with 2% FBS, then stained with Zombie aqua (1:1000) (BioLegend, San Diego, CA), anti-human IgD-BV421 (clone IA6-2, BD Biosciences, Franklin Lakes, NJ), CD20-FITC (clone 2H7, BioLegend), CD38-PE (clone HIT2, BioLegend), and CD19-PE-CF594 (clone HIB19, BD Biosciences) for 30 min at RT. Cell sorting was performed on a BD FACSMelody (BD Biosciences) and viable GC B-cells were defined as CD19 + CD20 + CD38 + IgD-, with the sort rate < 1500 events/second. A total of 864,000 cells were sorted into RPMI-1640 medium (Gibco, Thermo Fisher Scientific, Waltham, MA), supplemented with 1% penicillin–streptomycin, 20 mM HEPES, and 50% FBS.
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