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Sitran sirna transfection reagent

Manufactured by OriGene

SiTran' is a siRNA transfection reagent manufactured by OriGene. It is designed to facilitate the delivery of small interfering RNA (siRNA) molecules into cells for the purpose of gene silencing experiments.

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5 protocols using sitran sirna transfection reagent

1

Modulation of TGF-β Signaling Pathways

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Mammalian expression constructs of p300, YAP, TAZ, TEAD3, and TEAD4 (WT and the K297A, Y429A, and W299A mutants), fused with HA or Flag tag, were generated based on the pcDNA3.1(+) vector. The luciferase reporters, including CAGA-luciferase, ARE-luciferase, 3TP-luciferase, Gal4-luciferase (pFR-luciferase), and Renilla-luciferase, and constructs encoding Gal4-DBD, Gal4-Smad3, Flag-Smad3, Flag-Smad4, 6Myc-Smad2, 6Myc-Smad3, and 6Myc-Smad4 were described previously (Yan et al., 2016 (link), 2018 (link)).
Double stranded siRNAs targeting human YAP, TAZ, or TEAD4 and the non-specific control siRNA were purchased from RiboBio (China). siRNAs were transfected using the siTranTM siRNA Transfection reagent (OriGene). The sequences of siRNAs used in this study were as follows: YAP siRNA, 5′-CCACCAAGCTAGAT AAAGA-3′; TAZ siRNA, 5′-CCGCAGGGCTCATGAGTAT-3′; TEAD4 siRNA #1: 5′-GTATGCTCGCTATGAGAAT-3′; and TEAD4 siRNA #2: 5′-GGAACAAACUGUGCCUGAATT-3′. Recombinant human TGF-β1 peptide was purchased from R&D Systems. In this study, TGF-β treatments all refer to recombinant TGF-β1 peptide.
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2

CYR61 gene silencing by siRNA

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The non-specific control siRNA (NC) and those targeting human CYR61 were purchased from RiboBio (China). siRNAs were transfected with the siTranTM siRNA transfection reagent (OriGene). The sequences of siRNAs used in this study were as follow: CYR61 siRNA #1, 5’-CCACACGAGTTACCAATGA-3’; CYR61 siRNA #2, 5’-GAACCAGTCAGGTTTACTT-3’. Recombinant human CYR61 (CB98) peptides was purchased from Novoprotein (Shanghai).
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3

Plasmid constructs and RNA interference for Hippo-YAP signaling

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Mammalian expression plasmids for Smad2, Smad3, Smad4, TEAD4, and YAP (WT and point mutants including 5SA, S94A, and 5SA/S94A) were fused with HA-, Flag-, or Myc-tags and constructed using the vector pcDNA3.1(+) or pCMV5 (53 (link), 54 (link), 55 ). The full-length complementary DNA of human CYR61 gene was inserted into the pcDNA3.1(+) with a C-terminal Flag tag. The CYR61 gene promoter regions, i.e., the −2475 to +15 bp DNA fragment from the TSS or different truncations of this region, were cloned into pGL3.0-basic vector to generate CYR61-pro-luciferase constructs.
The nonspecific control siRNA and those targeting human YAP, TAZ, or CYR61 were purchased from RiboBio. siRNAs were transfected with the siTran siRNA Transfection reagent (OriGene). The sequences of siRNAs used in this study were documented in Table S2.
Recombinant human TGF-β1 (CA59) and CYR61 (CB98) peptides were purchased from Novoprotein. Small chemical inhibitors, such as JSH-23 (HY-13982), SB216763 (HY-12012), verteporfin (HY-B0146), SB431542 (HY-10431), PD0325901 (HY-131295), SP600125 (HY-12041), LY3214996 (HY-101494), and LY294002 (HY-10108), were all purchased from MedChemExpress (MCE), while XMU-MP-1 was obtained from AbMole (M9057).
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4

Protein Knockdown in Prostate Cancer Cells

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PC-3 and DU-145 (1 × 105) cells were seeded in T25 flasks and after 24 h post seeding time, fresh medium was supplied and siRNA (20 nM for PKC-ι/ζ or 30 nM for SNAIL1 or PRRX1) treatments were conducted against scrambled siRNA (control) for 48 h using ‘siTran’ siRNA transfection reagent (TT300002, Origene Technologies, Inc.) according to the manufacturer’s recommended ratios. The cell pellets were collected at the end of 48 h incubation period to perform Western blot experiments or qPCR experiments as described in Win, et al. [7 (link)]. Duplex sequences used in siRNAs are as follows. PKC-ι; rGrUrArUrUrCrArCrUrUrCrArArArUrCrArUrArArArCrUTA, PKC-ζ; rGrArGrGrArArUrArArArArUrGrUrUrCrCrGrArUrGrUrUGT, and SNAIL1; NM_005985 and PRRX1; NM_006902.4.
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5

Silencing PKC-ι/ζ in Cancer Cells

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BE(2)-C and BE(2)-M17 (1 × 105) cells were seeded in T75 flasks and 24 h post-seeding, fresh media were supplied and short interfering RNA (siRNA) (30 nM for PKC-ι/ζ) treatments were conducted against scrambled siRNA (control) for 48 h using ‘siTran’ siRNA transfection reagent (TT300002, Origene Technologies, Inc.) according to the manufacturer’s recommended ratios. Cell pellets were collected at the end of the 48 h incubation period for Western blot or qPCR experiments, as described in Win, et al. (24 (link)). Duplex sequences used in siRNAs were, for PKC-ι: rGrUrArUrUrCrArCrUrUrCrArArArUrCrArUrArArArCrUTA and for PKC-ζ: rGrArGrGrArArUrArArArArUrGrUrUrCrCrGrArUrGrUrUGT.
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