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5 protocols using donkey anti rabbit hrp antibody

1

Antibodies and Compounds Targeting Tropomyosin

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Tpm isoform‐specific Tpm antibodies are described by Schevzov et al. 63: γ9d (sheep polyclonal and mouse monoclonal antibodies) recognizes the 9d exon from the Tpm3 gene (both human and mouse) corresponding to Tpm3.1 (Tm5NM1) and Tpm3.2 (Tm5NM2); CG3 (mouse monoclonal antibody) recognizes the 1b exon from the Tpm3 gene, which is contained in all cytoskeletal (non‐muscle) Tpms 64. Primary antibodies used: Akt and phospho‐Akt (Ser473) rabbit polyclonals (1:1000; Cell Signalling Technology, Inc.); GLUT4 (1F8) mouse monoclonal (1:3000 for western blots; 1:200 for immunofluorescence staining) (from David James) 65; rSec8 mouse monoclonal (Stressgen); Myo1c (M2) mouse monoclonal 66; syntaxin 4 rabbit polyclonal (Synaptic Systems); α‐tubulin mouse monoclonal (DM1a) (Sigma) and MyoIIA rabbit polyclonal (Covance). Secondary antibodies used for western blot analysis: anti‐rabbit, anti‐sheep and anti‐mouse IgG‐conjugated horseradish peroxidise (HRP) (GE Healthcare) and donkey/anti‐rabbit/HRP antibodies (for Akt western blots) (Jackson ImmunoResearch Laboratories).
The anti‐Tpm compound TR100 has been designed to target Tpm3.1 using the sequence divergence at the C‐terminus of cytoskeletal versus muscle Tpms. This compound targets Tpm3.1 and disrupts actin filaments by inhibiting the actin filament‐stabilizing action of Tpm3.1 41.
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Complement Protein Binding Assay

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Wells coated with purified complement components C3, C4, C5 WT or C5 R885H were used to assess the binding of our nanobodies and Ecu-mab to different complement proteins. Nanobodies and Ecu-mab were added in a 10-fold titration (0.001–1000 nM). Next, wells containing nanobodies were incubated with 1:2000 primary polyclonal rabbit-anti-VHH antibody QE19 (QVQ Holding BV) and 1:5000 secondary polyclonal donkey-anti-rabbit-HRP antibodies (Jackson ImmunoResearch). To detect Ecu-mab binding, wells were incubated with anti-human-kappa-HRP (Southern Biotech) detection antibodies.
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3

Quantifying Llama Anti-C5 Antibodies

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Wells coated with C5 were incubated with llama serum to measure the presence of C5-binding llama antibodies. Llama serum was diluted in PBS, supplemented with 1% skimmed milk (Marvel). Llama antibodies were detected using 1:2000 primary polyclonal rabbit-anti-VHH antibody QE19 (QVQ Holding BV) and 1:5000 secondary polyclonal donkey-anti-rabbit-HRP antibodies (Jackson ImmunoResearch). ELISA was developed using 3.7 mM O-phenylenediamine dihydrochloride + 50 mM Na2HPO4 2H2O + 25 mM citric acid + 0.03% H2O2 and the reaction was stopped with 0.5 M sulfuric acid.
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Quantification of Active tPA in Tissue

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Frozen lumbar spinal cords were homogenised in 0.4 M HEPES; 0.1 M NaCl; pH 7.4. Avidin-coated plates (Molecular Innovations, AVI-PLATE) were incubated with biotinylated PAI-1 protein (Molecular Innovations, NTBIOC-PAI) followed by incubation with tissue lysates or defined amounts of recombinant mouse tPA protein (Molecular Innovations, MTPA) to generate the standard curve. The amount of bound tPA was detected using rabbit anti-mouse tPA antibody (Molecular Innovation, ASMTPA-GF-HT) followed by incubation with donkey anti-rabbit-HRP antibody (Jackson Immuno Research, 711-036-152). Peroxidase activity was detected with tetramethylbenzidine (Molecular Innovations, TMB) chromogenic substrate and measured at 450 nm using the SoftMax Pro suite. The amount of tPA activity was related to the total protein content as measured by the BCA kit (Pierce) and presented as ng of active tPA/mg of total protein.
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5

Immunoblotting of C. briggsae DPY-27 and MIX

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Fifty adult hermaphrodites from strain AF16 [wild-type C. briggsae], strain TY5774 Cbr dpy-27(y706), 3xFLAG-tagged Cbr dpy-27, or strain TY5005 [Cbr dpy-27(y436)] were picked into 25 µL of water, diluted with 25 µL of 2 x SDS Sample Buffer, and heat denatured at 98 °C for 4 min. Samples (20 µL) were fractionated with 3–8% Tris Acetate SDS-PAGE electrophoresis and transferred onto nitrocellulose membranes using standard conditions (60 min at 100 V). Membranes were immunoblotted with either rabbit polyclonal anti-DPY-27 (this study) or rabbit polyclonal anti-MIX antibody (this study). Following incubation with a primary antibody, membranes were incubated with a secondary donkey anti-rabbit HRP antibody (Jackson ImmunoResearch, #711-035-152, RRID: AB_10015282). Nitrocellulose membranes were then incubated in WesternBright Sirius ECL solution (Advansta Corporation, #K-12043-D20) for 2 min, and the chemiluminescence signal was acquired using Image Lab software (Bio-Rad).
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