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10 protocols using hydrindantin

1

Chitosan Nanoparticle Formulation Protocol

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Lactose monohydrate (Sorbolac 400, Meggle, Wasserburg, Germany) was used as the matrix material of microparticles. Polyethylene glycol 400, 1000 and 3000 (PEG 400, PEG 1000, PEG 3000; Merck, Darmstadt, Germany) were used as the stabilizers with ethanol absolute (Merck, Germany) as the additive. Chitosan (molecular weight: 20,000–50,000 g/mol, degree of deacetylation ≥ 90%; Zhejiang Aoxing Biotechnology Co. Ltd., Zhejiang, China) was used as the model matrix material that was transformable into nanoparticles, with glacial acetic acid as a solvent (Merck, Germany). Lithium acetate anhydrous (ACROS Organics™, Waltham, MA, USA), ninhydrin and hydrindantin (Sigma-Aldrich, Saint Louis, MO, USA) were the reagents used for the quantitative assay of Chitosan.
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2

Biopolymer Synthesis and Characterization

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1-Ethyl-3-methylimidazolium
acetate ([EMIm][OAc]),
dimethyl sulfoxide (DMSO), chitosan (low MW and medium MW), plant
α-cellulose, acetic acid, glucose, yeast extract, peptone, anhydrous
disodium phosphate, citric acid monohydrate, acetate buffer, sodium
acetate, ninhydrin, hydrindantin, 2-methoxyethanol, phosphate-buffered
saline (PBS), polystyrene latex particles, Dulbecco’s modified
Eagle’s medium (DMEM), fetal bovine serum (FBS), sodium pyruvate,
nonessential amino acids (NEAA), penicillin streptomycin (pen strep),
formalin, and methanol (MeOH) were purchased from Sigma-Aldrich. Fluorescein
phalloidin (FITC), and 4′,6-diamidino-2-phenylindole (DAPI)
were purchased from Thermo Fisher Scientific. Plant α-cellulose
and [EMIm][OAc] were dried at 60 °C en vacuo overnight; and DMSO
dried over activated 4 Å molecular sieves before use.
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3

Chitosan Quantification via Ninhydrin Assay

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Quantification of chitosan was performed using a colorimetric Ninhydrin assay adapted from Leane et al., 2004 [39 (link)]. Lithium acetate buffer (4 M) was prepared by dissolving 4.08 g of lithium acetate dihydrate (Aldrich grade 98%, Sigma Aldrich, Milwaukee, WI, USA) in 10 mL distilled water and adjusted to pH 5.2 using glacial acetic acid. Ninhydrin reagent was prepared by adding 0.8 g Ninhydrin (ACS reagent, Sigma Aldrich, Bangalore, India) and 0.12 g hydrindantin (Sigma Aldrich, Vienna, Austria) in 30 mL dimethylsulphoxide (DMSO) (Calbiochem, EMD Chemicals, San Diego, CA, USA) into 10 mL of 4 M lithium acetate buffer. Ninhydrin reagent (0.5 mL) was added to 0.5 mL of sample in a capped test tube. Blanks sample were prepared by substituting the sample with distilled water. The contents were mixed and heated in boiling water for 30 min, cooled and 15 mL of 50:50 ethanol:water cosolvent mixture added. The contents of each tube were vortexed for 15 s to ensure complete oxidization of the excess hydrindantin, prior to measuring absorbance spectrophotometrically at 570 nm (Cecil 1000 Series). The results were analysed by fitting the data to zero order, first order, Higuichi and Korsmeyers-Peppas equations [40 (link)] to deduce the monoterpene release profile from the hydrogels.
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4

Enzyme Purification and Analysis Protocol

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The following chemicals were used in the experiments: Na2HPO4, NaH2PO4, NaCl, bovine serum albumin (BSA), imidazole, 5α-DHT, methylglyoxal, 9,10-phenanthrenequinone and hydrindantin were purchased from Sigma (St. Louis, MO), and Ni-NTA chelating agarose CL-6B was purchased from Peptron company (Daejon, Korea). Bradford Protein assay kit and Ultrafree-0.5 Centrifugal Filter Device were purchased from Bio-Rad (Richmond, CA) and Millipore (Bedford, MA), respectively.
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5

Metabolomic Analysis of Diverse Compounds

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Sucrose, glucose, fructose, mannose, galactose, malic acid, inositol, citric acid, quinic acid, benzoic acid, fumaric acid, glycine, alanine, valine, leucine, isoleucine, theronine, proline, glutamine, methionine, cystein, histidine, tyrosine, arginine, lysine, asparagine, aspartic acid, phenylalanine, glutamic acid, serine, threonine, tyrosine, γ-aminobutyric acid, methoxyamine hydrochloride solution (MOX) in pyridine (2%), N-methyl-(N-trimethylsilyl) trifluoracetamide (MSTFA), methylchloroformate (MCF), sodium hydroxide, pyridine, methanol, N,N-dimethylformamide, chloroform, sodium bicarbonate, and sodium ethylenediaminetetraacetic acid (EDTA) were purchased from Fisher Scientific (Pittsburg, PA, USA). Hydrindantin, ninhydrin, lithium hydroxide, and N-methyl-N- [tert-butyl dimethylsilyl]-trifluroacetamide (MTBSTFA), and amino acid standard mix were purchased from Sigma-Aldrich (St. Louis, MO, USA).
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6

Quantitative Protein and Amino Acid Analysis

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The following enzymes and organic/inorganic
chemicals were purchased from Sigma-Aldrich: premade ninhydrin solution
(consisting of 2% ninhydrin, hydrindantin in dimethyl sulfoxide (DMSO)
and lithium acetate buffer pH 5.2), Bradford reagent (consisting of
Coomassie Brilliant Blue G-250 dye, methanol, and phosphoric acid),
α-naphthol, sodium hydroxide (NaOH), 200 proof ethanol (EtOH),
bromine (Br2; ACS reagent), urea. Hydrochloric acid (HCl),
manufactured by EMD Millipore were purchased from Fisher Scientific.
Additionally, polyethylene film or PEF (plastic wrap) was purchased
from Price Chopper. Water used in all of the experiments was ultrapure
(18.2 MΩ·cm) water from PURELAB Flex, an ELGA water purification
system.
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7

Quantifying Dermal Extracellular Matrix Peptides

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HR-ADM samples were air dried overnight, weighed (21–25 mg), and rinsed in 0.9% saline solution. Samples (n = 3 donors) were then enzymatically digested (6 hours, 37°C water bath) in a collagenase type 1A (6.65 U/mL final enzyme solution; Sigma, St. Louis, Mo.) and thermolysin (15 U/mL final enzyme solution; Sigma, St. Louis, Mo.) solution in tricine buffer (pH 7.5). The filtered extract was mixed with ninhydrin (0.016 g/1 mL solution)–hydrindantin (0.0024 g/1 mL solution) (Sigma, St. Louis, Mo.) in ethylene glycol monoethyl solution and 4 N sodium acetate buffer (pH 5.5) that reacts with the released amino acids, producing a deep purple color proportional to the amount of peptides released. The standard curve was established with l-leucine (stock solution 2.0 mg/mL; Sigma, St. Louis, Mo.) and sample absorbances were read at 570 nm. The controls were crosslinked28 (link) and denatured dermis samples. Unprocessed dermal tissue was crosslinked (16 hours, room temperature) with 0.025% glutaraldehyde (Sigma, St. Louis, Mo.) solution, followed by a 2-hour rinse step to remove residual glutaraldehyde. The denatured condition (representing harsh chemical processing) was prepared by crosslinking as above and then boiling (at 100°C) the rinsed samples for 5 minutes. These samples were digested as stated above, reacted, and read at 570 nm.
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8

Thermolysin-based ACE Inhibitor Assay

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Thermolysin (T7902, Sigma, St. Louis, MO, USA), ACE (from rabbit lung), hippuryl-L-histidyl-L-leucine (HHL), hydrindantin, and lithium hydroxide were purchased from Sigma (USA). Acetonitrile (LC-MS grade) was purchased from Roth GmbH (Karlsruhe, Germany); L-Leucine from Aldrich Co. (Milwaukee, WI, USA); dimethyl sulfoxide (DMSO) from Merck (Darmstadt, Germany); ninhydrin from Riedel-de Haen (Seelze, Germany); and acetic acid and sodium hydroxide from Hayashi Pure Chemical Ltd. (Osaka, Japan).
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9

Purification Protocols for Biochemical Assays

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The following chemicals were used in the experiments; 5α-dihydrotestosterone (5α-DHT), methylglyoxal, 9,10-phenanthrenequinone and hydrindantin were purchased from Sigma (St. Louis, MO), and Ni-NTA chelating agarose CL-6B was purchased from Peptron company (Promega corporaton, USA). Bio-Rad Bradford Protein assay kit was purchased from (Bio-Rad Laboratories, Inc (South Korea). The others, including Na2HPO4, NaH2PO4, NaCl, bovine serum albumin (BSA), and imidazole, were purchased from Sigma (St. Louis, MO).
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10

Chitosan-Based Nanoparticle Formulation

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Low-molecular-weight chitosan (molecular weight: 20 000–50 000 Da, degree of deacetylation ≥ 90%; Zhejiang Aoxing Biotechnology Co. Ltd., China) and high-molecular-weight chitosan (molecular weight: 310 000–375 000 Da, degree of deacetylation ≥ 75.0%; Sigma-Aldrich, Ireland) were used as the matrix material of nanoparticles with glacial acetic acid as the solvent of chitosan (Merck, Germany). Tween 80 (Fisher Scientific, UK), span 80 (Merck, Germany) and ethanol absolute for analysis (Merck, Germany) were used as additives. Lithium acetate anhydrous (ACROS Organics™, USA), ninhydrin and hydrindantin (Sigma-Aldrich, USA) were used in quantification assay of chitosan. Lactose monohydrate (Sorbolac 400; Meggle, Germany) was used as the microparticulate carrier with polyethylene glycol 3000 (PEG3000; Merck, Germany) as the stabilizer.
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