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Cytoexpert analysis software

Manufactured by Beckman Coulter
Sourced in Italy

Cytoexpert is an analysis software developed by Beckman Coulter. It is designed to provide automated analysis of cell samples for a variety of applications.

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5 protocols using cytoexpert analysis software

1

Quantitative Apoptosis Assessment by Flow Cytometry

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A FITC Annexin-V apoptosis detection kit (BD Pharmingen, San Diego, CA, USA) was used to assess apoptosis, according to the manufacturer’s instructions. Briefly, 105 cells were gently re-suspended in 100 µL of binding buffer and incubated for 15 min at room temperature in the dark with 5 µL of Annexin-V-FITC and 5 µL of Propidium Iodide (PI). After the addition of 200 µL of binding buffer, samples were analyzed with a Cytoflex flow cytometer with the FL1 and FL3 detector in a log mode, using the Cytoexpert analysis software (both from Beckmann Coulter). For each sample, 10,000 events were collected. Viable cells are Annexin-Vneg/PIneg (unlabelled), necrotic cells are Annexin-Vneg/PIpos, while early and late apoptotic cells are Annexin-Vpos and PIneg and PIpos, respectively.
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2

Annexin-V-FITC Apoptosis Assay

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A FITC Annexin-V apoptosis detection kit (BD Pharmingen, San Diego, CA, USA) was used to detect apoptosis, following the manufacturer’s instructions. Briefly, 105 cells were gently re-suspended in 100 µL of binding buffer and incubated for 15 min at room temperature in the dark with 5 µL of Annexin-V-FITC and 5 µL of Propidium Iodide (PI). After the addition of 200 µL of binding buffer, samples were analyzed with a Cytoflex flow cytometer with the FL1 and FL3 detector in a log mode, using the Cytoexpert analysis software (both from Beckmann Coulter). For each sample, 10,000 events were collected.
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3

Annexin-V Apoptosis Assay for PS-NPs

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To assess apoptosis, a FITC Annexin-V apoptosis detection kit (BD Pharmingen, San Diego, CA, United States) was used following the manufacturer’s instructions. The day before PS-NP treatment, cells were seeded at a density of 500,000/well and grown under standard culture conditions in 6-well plates. After 24 h, 10, 100, and 500 μg/mL of PS-NPs were added to cells, which were further incubated. After 96 h, 105 cells were gently re-suspended in 100 μL of binding buffer and incubated for 15 min at room temperature in the dark with 5 μL of Annexin-V-FITC and 5 μL of Propidium Iodide (PI). After the addition of 200 μL of binding buffer, samples were analyzed with a Cytoflex flow cytometer with the FL1 and FL3 detector in a log mode, using the Cytoexpert analysis software (both from Beckmann Coulter, Milan, Italy). For each sample, at least 5,000 events were collected. From the same samples, the dot plots of the autofluorescence parameters (forward and side scatter) were analyzed for changes in cell size and cellular content.
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4

Extracellular Vesicle Size Analysis

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Five microliters of each lEV suspension was analyzed using a CytoFLEX S flow cytometer (Beckman Coulter Life Sciences, Indianapolis, IN, USA) and CytoExpert analysis software (Beckman Coulter Life Sciences). lEV gate was indicated by size calibration beads (Spherotech, Inc., Lake Forest, IL, USA) between 100 and 1300 nm. lEV sizes were analyzed using 405 nm violet side scatter. Data analysis was performed using FlowJo software (version 10 for Windows) (FlowJo, LLC, Ashland, OR, USA).
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5

Cell Cycle Analysis by Flow Cytometry

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Approximately 0.5 × 106 cells per experimental condition were harvested, fixed in 70% cold ethanol and kept at 4 °C overnight. Cells were then resuspended in 20 µg/ml PI and 100 µg/ml RNAse, final concentrations. Cell cycle profiles (105cells) were analyzed by a CytoFLEX flow cytometer with the FL3 detector in a linear mode using the CytoExpert analysis software (both from Beckmann Coulter, Milano, Italy). Data were analyzed with ModFit software (Verity Software House, ME, USA).
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