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Dp214

Manufactured by Tiangen Biotech
Sourced in China

The DP214 is a high-performance liquid chromatography (HPLC) system designed for analytical and preparative applications. It features a binary solvent delivery system, an automated sample injection module, and a variable wavelength UV-Vis detector. The DP214 is capable of handling a wide range of sample types and can be used for the separation, identification, and quantification of various chemical and biological compounds.

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7 protocols using dp214

1

ChIP Assay for Transcription Factor Binding

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A ChIP assay was performed using a ChIP Assay Kit (P2078, Beyotime, Shanghai, China) according to the manufacturer’s instructions. In brief, nuclear lysates were sonicated to shear DNA to approximately 200–300 bp, followed by immunoprecipitation overnight at 4 °C using rabbit IgG or an antibody against HNF1A (Supplementary Table S2). Immunoprecipitated DNA was purified by using a universal DNA purification kit (DP214, Tiangen, Beijing, China) and then analyzed by real-time PCR. The relative expression level of the target gene was normalized to the adjusted input [CT input – log2 (starting input fraction)] and calculated using the 2–ΔΔCT method. The primer sequences used in the ChIP assay are listed in Supplementary Table S3.
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2

Cloning Pluripotency Transcription Factors

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The Open reading frames of Oct4, Sox2, Klf4 and c-Myc (OSKC) factors were amplified by PCR using PrimeSTAR® Max DNA Polymerase (DR045A, Takara, Dalian, China) and primers sets (Table 1) in which the cutting sequences of EcoRI and XhoI enzymes were added to the 5' end of the forward and reverse primers respectively. The primers were synthesized by Life Technologies Co., Ltd. (Shanghai, China). The produced amplicons as well as the used expression vector (pCDNA3) were digested by EcoRI and XhoI then purified using an universal DNA purification kit (DP214, TIANGEN, Beijing, China) and finally ligated to each other using T4 DNA ligase enzyme (2011A, Takara, Dalian, China) according to the manufacturer’s protocol. The newly formed recombinant plasmids were cloned in DH5α-E. coli competent cells and re-extracted using TIAN prep Mini plasmid Kit (DP103, TIANGEN, Beijing, China).
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3

Molecular Detection of P. jirovecii and T. gondii

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Fourteen mtSSU gene sequences from different P. jirovecii strains and 37 Rep-529 gene sequences from different T. gondii strains from GenBank were aligned individually using the “Bioedit” software (v7.0.1, Ibis Biosciences, Carlsbad, CA, USA) (S1 and S2 Tables). Primers and probes were designed using Primer Express 3.0 and Oligo 7.0 software based on the conserved region of mtSSU of P. jirovecii and Rep-529 region of T. gondii with expected amplification size124bp for P. jirovecii and 233bp for T. gondii (Table 2). The specificity of the primers and probes was verified using NCBI Primer blast. The primers and probes were synthesized by Sangon Biotech Co., Ltd.
The mtSSU and Rep-529 target sequence fragments were PCR amplified using the primers described above from the clinical specimens from patients with PCP and cultured T. gondii parasite respectively, and purified with a DNA purification kit (TIANGEN, DP214, Beijing, CHN), These were then subcloned into plasmid pUC19 (TAKARA, 3219, Tokyo, Japan) using EcoRI and HindIII sites. The correct inserts of target DNA in the recombinant plasmids were confirmed by DNA sequencing.
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4

Chromatin Immunoprecipitation of KLF9 in HTR8/SVneo Cells

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ChIP assays were performed on HTR8/SVneo cells stably overexpressing KLF9 using a ChIP assay kit (P2078, Beyotime Institute of Biotechnology, China) according to the manufacturer’s instructions. HTR8/SVneo cells (2×106 cells) were cross-linked in 10 cm dishes, then the nuclear lysates were sonicated to shear DNA to approximately 200–300 bp fragments, followed by immunoprecipitation overnight at 4 °C using the anti-IgG or anti-KLF9 antibodies listed in Supplementary file 4. The immunoprecipitated DNA was purified using a DNA purification kit (DP214, Tiangen Biotech Co.,Ltd, China) and then analyzed by PCR using the primers specified in Supplementary file 3.
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5

Gut Microbiota Profiling by T-RFLP Analysis

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To evaluate the gut microbiota, feces were collected from all mice at the 1st, 3rd, 6th, 12th, and 18th week and T-RFLP analysis performed. Bacterial DNA was amplified with bacterial 16S rRNA gene-specific primers: 8F (5’-FAM-AGAGTTTGATCATGGCTCAG-3’) and 1492R (5’-GGTTACCTTGTTACGACTT-3’) [58 (link)], which included a FAM label at the 5’end of the 8F primer. The PCR products were purified with an agarose gel recovery kit (DP214, Tiangen, China) according to the manufacturer's instructions. Restriction digests were performed with MspI (Hpa, Hap II) (Takara, Dalian, China) according to the manufacturer's instructions. PCR products (20 μL) were incubated for 4 hr at 37°C followed by 80°C for 20 min. The fragments (T-RFs) were desalinated by ethanol precipitation and then mixed with an internal size standard (LIZ500) at 95°C for 5 min. The fragments were sequenced with a DNA Sequencer in the range of 50–1000 bp (ABI PRISM 3700, USA) and the results analyzed using the Peak Scanner (v1.0) and Gene Marker 2.20 software.
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6

Amplification and Purification of SAG22 Fragment

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The SAG22 fragment with the corresponding enzymatic sites (EcoRI, BamHI) was amplified according to the above primer sequence using pUC57-SAG22 as the template, and the reaction conditions were: predenaturation at 98°C for 3 min; denaturation at 98°C for 10 s, annealing at 55°C for 5 s, extension at 72°C for 10 s, 34 cycles of amplification; extension at 72°C for 5 min. After the PCR reaction, all products were electrophoresed on 1% agarose gel (A9539, Sigma, CHN, Darmstadt, Germany) and the amplification results were detected under the gel imaging system (ChemiDocXRS+, BIO-RAD, CA), and if the band size was correct, the products were purified and recovered using the gel recovery kit (DP214, Tiangen Biochemical Technology (Beijing) Co., Beijing, China)
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7

Generating Transgenic ASMT-overexpressed Goats

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The production process for the ASMT-overexpressed goats is shown in Figure 1A. Healthy Laoshan dairy goat ewes with a body weight about 65 kg were selected and primed with progesterone using a controlled internal drug release (CIDR) device (EAZI-BREED® CIDR® Sheep and Goat Device, Auckland, New Zealand) for estrus synchronization. Excellent robust rams were used for artificial semen collection. Superovulation and endoscopic-assisted insemination were carried out on embryo-donor goats. The plasmids were digested with NotI and SalI enzymes, and the linearized DNA was extracted from the gel and was purified with a DNA purification kit (Tiangen, Beijing, China, DP214). The linearized DNA solution was then injected into the cytoplasm of the prokaryotic embryos at a concentration of 10 µg/mL and a volume of 5 pL. A total of 3 to 5 embryos that were in good condition were transferred to one recipient within one hour. A total of 55 recipients were transplanted. After 60 days, a B-ultrasound was performed to examine the pregnancy status of the recipient. A total of 18 recipients became pregnant, and 10 lambed.
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