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10 protocols using sonata 1.5t

1

MCP Joint Distraction MRI Dynamics

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Imaging studies were performed on a Siemens Sonata 1.5T system (Sonata; Siemens Healthcare; Erlangen, Germany) using the provided Siemens finger coil. Before and after MCP distraction, static magnetic resonance images were obtained of the MCP joint (3D T1 weighted GRE: Field of view = 160 x 120 mm, 256 x 192 matrix, 2 mm slice thickness, Flip angle = 30 degrees, TR = 20.0 ms, TE = 3.17 ms, bandwidth = 250 Hz/pixel). During distraction of the MCP joint, cine MRI was acquired from the midline of the joint at a rate of 3.2 frames per second until the distraction force was removed following the cracking event. Cine imaging parameters for a single shot steady-state free-precession (SSFP) pulse sequence were as follows: Field of view = 200 x 75 mm, 192 x 72 matrix, 5 mm slice thickness, Flip angle = 70 degrees, TR = 4.30 ms, TE = 2.15 ms, bandwidth = 1000 Hz/pixel.
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2

Neuroimaging Evaluation of Neurocysticercosis

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The clinical symptoms included headache in 38 patients, seizures in 18 patients, movement disorders in 12 patients and consciousness disorders in 7 patients. In this series, 55 cases were positive on enzyme-linked immunosorbent assay (ELISA) examination, 3 cases were positive for cysticercosis IgG; 11 cases were confirmed by surgery (including 1 case of biopsy). Seven cases had CT examinations, including enhanced CT in 1 case, using Ultravist 370 (1ml/kg) as contrast-enhanced agent. Fifty-four cases had MRI examinations, including sequences of T1-weighted imaging (T1WI), T2-weighted imaging (T2WI), and fluid attenuated inversion recovery (FLAIR), acquiring axial, coronal and sagittal data. Among them, 46 cases underwent contrast-enhanced MRI simultaneously by injecting gadopentetate dimeglumine (0.1 mmol/kg). CT devices included Sensation 16 Row and Somatom Definition AS+ (Siemens company), and Brilliance 16 row (Philips company). MR devices included Trio Tim 3.0T, Avanto 1.5T and Sonata 1.5T (Siemens company), SIGNA EXCITE 3.0T (GE company), Achieva 3.0T (Philips company), and MRT200SP5 1.5T (Toshiba company).
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3

Multimodal MRI Imaging Protocol

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MRI studies were performed on a Siemens Sonata 1.5 T or a MAGNETOM Verio 3T scanner (Siemens Medical Solutions, Erlangen, Germany) located at the Harper Hospital, Wayne State University. Repeated images were acquired on the same scanner in all but one patient. On both scanners, MRI acquisition included an axial T1 3-dimensional magnetization prepared rapid gradient echo (1mm slice thickness), an axial fluid attenuated inversion recovery, an axial T2-weighted turbo spin-echo acquisition, SWI, followed by post-contrast dynamic magnetic resonance perfusion-weighted imaging and axial magnetization prepared rapid gradient echo. SWI parameters were: (1) 1.5 T scanner: SWI acquisition was performed with a 3-dimensional fully balanced gradient-echo sequence with flip angle 20°; echo-planar imaging factor 5; acquisition matrix 512×256×48; field of view 256×256×96 mm3; voxel size 0.5×0.5×2 mm3; TR/TE 89/40ms; bandwidth 160Hz/pixel.8 (link) (2) 3 T scanner: field of view 224×168×128 mm; base resolution 448; voxel size 0.5×0.5×1 mm3; partition number 96; TR/TE 30/18ms; bandwidth 90∼120Hz/pixel, 2× accelerated GRAPPA paralleling imaging with 24 reference lines, and 6/8 partial Fourier along phase encoding.
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4

MRI Imaging Protocol for Diffusion and Structural Analysis

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Diffusion and structural MRIs were obtained on a GE Signa Excite HDx or Lx 1.5T (GE Healthcare, Waukesha, WI); Siemens Avanto or Sonata 1.5T (Siemens Healthcare, Erlangen, Germany); or Siemens Trio, Allegra, or Verio 3T MRI system. Standard anatomical MRI consisted of pre- and postcontrast (gadolinium-diethylenetriamine pentacetic acid at a dose of 0.1 mmoL/kg body weight; Magnevist, Bayer Schering Pharma, Leverkusen, Germany) axial T1-weighted images along with precontrast axial T2-weighted and fluid-attenuated inversion recovery sequences with standard sequence parameters. Patients also received diffusion-weighted images with an echo/repetition time = 80 to 120 ms/>5000 ms, matrix size = 128 × 128, slice thickness = 3 mm with no interslice gap, and b values of 0 and 1000 s/mm2 in 3 orthogonal directions. ADC maps were calculated for each image voxel as ADC(x, y, z) = −1/1000 · ln[S(x, y, z)/S0(x, y, z)], where S(x, y, z) is the signal intensity of the voxel at coordinate (x, y, z) with b = 1000 s/mm2 and S0(x, y, z) is the signal intensity at voxel (x, y, z) with b = 0 s/mm2.
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5

Extracellular Recording of Monkey LPFC Neurons

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For technical reasons, we recorded neuronal activity in the monkey positioned to the left of the other one. Single-neuron activity in the LPFC was recorded extracellularly using tungsten electrodes (2.0–8.0 MΩ, FHC, Bowdoinham, ME). An electrode was advanced with a hydraulic microdrive (MO-95C, Narishige, Tokyo, Japan) through a stainless steel guide tube. Neuronal activities were converted into pulses using a spike waveform detector (Multispike Detector, Alpha Omega Engineering, Nazareth, Israel). We recorded activity in the right hemisphere of monkey S and in both hemispheres of monkey H while they were playing the games. Monkey P was always the competitor for monkeys H and S, which never competed against each other because both of them were trained with the same turret color (white). The recording area covered both the dorsal and ventral banks of the principal sulcus (Figure 8A), and was determined in reference to magnetic resonance images (whole-brain coverage, slice thickness 2 mm, Siemens, Sonata 1.5T).
We monitored the eye position of monkeys H and S with an infrared eye-camera system (sampling rate, 4 ms; R-22C-1, ISEYO Electronic, Tokyo, Japan), but did not restrict or control their eye movements.
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6

Multimodal MRI Brain Tumor Imaging Protocol

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Diffusion and structural MRIs were obtained on GE Signa Excite HDx (GE Healthcare, Waukesha, WI); Siemens Symphony, Avanto, or Sonata 1.5T (Siemens Healthcare, Erlangen, Germany); or Siemens Trio or Verio 3T MRI system. Anatomical MRI, including pre-contrast axial T2-weighted images, fluid-attenuated inversion recovery (FLAIR) images, and pre- and post-contrast (gadolinium-diethylenetriamine pentacetic acid at a dose of 0.1 mmoL/kg body weight; Magnevist, Bayer Schering Pharma, Leverkusen, Germany) T1-weighted images were collected according to the international standardized brain tumor imaging protocol (BTIP)[22 (link)]. Additionally, each patient also received diffusion-weighted images (DWIs) with echo time (TE) of 73–137 ms, repetition time (TR) of 3000–12000ms, slice thickness of 3–5mm with no interslice gap, matrix size of 128×128 or 192×192, number of excitations (NEX) of 1–4, flip angle of 90°, and b values of 0 and 1000 s/mm2 in 3 orthogonal directions. ADC was calculated from the acquired b=0 s/mm2 and b=1000 s/mm2 DWIs.
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7

CT Imaging Protocol for COVID-19 Patients

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All the PC patients during hospitalization had at least one chest CT scan. Brain CT scan or magnetic resonance imaging (MRI) was performed on those patients with CNS symptoms. Routine CT scans were performed on a series of CT systems (Somatom Sensation 16, Siemens Medical Systems, Forchheim, Germany; Aquilion 64, Toshiba Medical Systems, Otawara, Japan; Brilliance 16, Philips Medical Systems, Amsterdam, Netherlands). Consecutive 2 to 5 mm thick sections were fetched from the lung apex throughout the base for chest CT scan. Thick section for brain CT scan is 5 mm. Window settings used for browsing lung parenchyma were at width 1400–1600 Hu, level − 550 to − 600 Hu; corresponding values for soft tissues were at width 400 Hu, level 40 Hu. Window settings used for browsing brain were at width 80 Hu, level 40 Hu. MRI was performed on Sonata 1.5T, Siemens Medical Systems, Forchheim, Germany. Brain MRI has a series of scanning sequences including T2WI, T1WI, DWI and T2WI FLAIR.
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8

Magnetic Resonance Imaging Protocol

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The study used a Siemens Sonata 1.5 T superconducting MR scanner. MRI scanning was performed using 8-channel memorized phased-array coils, and a Leonardo graphic image workstation was used. The apparent diffusion coefficient (ADC) and fractional anisotropy (FA) values were measured using post-processing software.
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9

Quantifying Liver Fat via MRS

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Single voxel proton magnetic resonance spectroscopy (MRS) of the liver was performed on a Sonata 1.5T (Siemens). Sequences and quantification procedures for liver fat content were as described [10] .
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10

Structural MRI Processing and Hippocampal Volume

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MRI scans were obtained on a Sonata 1.5T, Vision 1.5T, or Trio 3.0T scanner (Siemens Corporation). Structural MRI processing steps have been described in detail previously (Buckner et al., 2004 (link); Xiong et al, 2011 (link)) and included motion correction, averaging across scans, atlas transformation, and inhomogeneity correction. Regional volumes were obtained via the Freesurfer image analysis suite (Version 4.1.0, Athinoula A. Martinos Center for Biomedical Imaging, Charlestown, Massachusetts). Hippocampal volume was selected as the region of interest (ROI) in this analysis and corrected for total brain volume.
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