The largest database of trusted experimental protocols

Clostridium perfringens sialidase

Manufactured by Merck Group

Clostridium perfringens sialidase is an enzyme isolated from the bacterium Clostridium perfringens. It functions to cleave sialic acid residues from glycoconjugates.

Automatically generated - may contain errors

4 protocols using clostridium perfringens sialidase

1

Sialidase-Mediated Ganglioside Hydrolysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
A mixture of mono- and di-sialogangliosides containing 5–10 μg sialic acid were incubated with Clostridium perfringens sialidase (2U/ml) (Sigma Chemical Co., St. Louis, MO) in 0.5 ml of 50mM sodium citrate-phosphate buffer, pH 5.5, at 37oC, for 2h, as previously described (25 (link)). A duplicate sample of equal quantity of gangliosides was incubated in buffer alone. Reactions were terminated by addition of 0.1 M NaOH, neutralized with 0.1 M HCl, desalted on SepPak (Waters Assoc., Milford, MA) columns and evaluated on TLC for hydrolytic products, with resorcinol. The presence of resorcinol-negative spots on sialidase-treated samples was confirmed on TLC’s, by reversible staining with iodine vapor, prior to resorcinol spraying (25 (link)). Efficacy of enzymatic activity was determined with gangliosides with sialidase-susceptible external sialic acid residues (GM3, GD3, GD1a, GD1b) and gangliosides with sialidase-resistant internal sialic acid residues (GM1a, GM2), respectively (Matreya LLC, Pleasant Gap, PA).
+ Open protocol
+ Expand
2

Siglec Ligand Expression in Glioma

Check if the same lab product or an alternative is used in the 5 most similar protocols
Siglec ligand expression on paraffin-embedded glioma tissue samples (4 μm) was assessed using human Siglec-Fc chimeras. Sections were deparaffinized and rehydrated with Xylene, graded ethanol and water. Sections were heated at 96 °C for 30 min in target retrieval solution, citrate pH 6.0 (Dako, Agilent Technologies, Santa Clara, CA). After cooling down to room temperature, sections were treated with 3% H2O2 in PBS for 15 min, washed with PBS and blocked with 20% goat serum. Siglec-7 and -9 ligands were stained with 50 nM Siglec-Fc chimeras, pre-complexed with 20 nM horseradish peroxidase-conjugated anti-human Fc antibody (Thermo Scientific, Waltham, MA) in HBSS at 4 °C. Human IgG1 (Sigma-Aldrich) was used as isotype control. Siglec-Fc binding was detected with a DAB peroxidase substrate kit (Vector Laboratories). All tissue sections were counterstained with hematoxylin, washed with water, dehydrated and mounted with KP-mounting medium (Klinipath, Olen, Belgium). Alternatively, sections were treated with 250 mU/ml Clostridium perfringens sialidase (Sigma-Aldrich) in HBSS for 2.5 h at 37 °C and washed with PBS before staining with Siglec-Fc chimeras. Images were acquired using a Leica DM6000 system (Leica, Wetzlar, Germany).
+ Open protocol
+ Expand
3

Assessing Siglec-F Ligand Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
Disaggregated mTECs were loaded into cuvettes (1 × 105 cells/slide) then centrifuged (600 rpm, 4 min, RT). After centrifugation, samples were fixed for 1 min in methanol at RT. Ligand expression was studied by incubation with Siglec-F-Fc or irrelevant humanized monoclonal IgG1 (each at 1 μg/mL, 1 hr, 37°C), then incubating with secondary biotinylated polyclonal anti-human IgG antibody. Samples were then washed and incubated with streptavidin/alkaline phosphatase linker, followed by visualization with Vector red chromogen (Vector Laboratories, Burlingame, CA). In some experiments, samples were pretreated with or without Clostridium perfringens sialidase (10 mU/mL, 24 hr, 37°C; Sigma-Aldrich). To permeabilize cells, samples were boiled in 10 mM sodium citrate buffer, pH 6.0 followed by 10 minutes at 95°C before staining. Biotinylated Maackia amurensis (MAA) lectin (specific for α2,3-linked sialic acid) and Sambucus nigra (SNA) lectin (specific for α2,6-linked sialic acid), each at 10 mg/mL (EY Laboratories, Inc., San Mateo, CA) were also used in some experiments as previously described.14 (link)Tissue distribution and localization of potential Siglec-F ligand was studied by histochemistry using Siglec-F-Fc (1 μg/mL, 1 hr, 37°C, R&D Systems) detected with alkaline phosphatase imaging as previously described.
+ Open protocol
+ Expand
4

Modulating Dendritic Cell Sialylation

Check if the same lab product or an alternative is used in the 5 most similar protocols
During the 6 day differentiation phase of moDCs, PBS or Ac 5 3F ax Neu5Ac was added on day 1 and refreshed together with the cytokines on day-4. For the dose-response experiment, 0-512 μM Ac 5 3F ax Neu5Ac was used, and 250 μM was used for all other experiments. To compare the efficiency between sialidase treatment and metabolic sialic acid blockade, day-6 moDCs treated with 250 μM Ac 5 3F ax Neu5Ac were thoroughly washed to remove the mimetic from the culture and reseeded in medium containing IL-4 and GM-CSF. Control day-6 moDCs were incubated for 1 h with 150 mU ml -1 Clostridium perfringens sialidase (Sigma-Aldrich) at 37 °C, thoroughly washed and reseeded. On different time points, sialylation was quantified by flow cytometry using the lectins MALII, SNA-I and PNA. For TLR stimulation, day-6 moDCs were washed, collected in cold PBS and seeded on 24-well culture plates in culture medium (Costar, Corning, NY, USA). Cells were stimulated for 24 h with poly(I:C) (20 μg ml -1 , 2 μg ml -1 , 0.2 μg ml -1 ) or LPS (1 μg ml -1 , 0.1 μg ml -1 , 0.01 μg ml -1 ). 24 h post stimulation, cells were harvested for flow cytometry analysis and supernatants were collected for cytokine measurements using ELISA.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!