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Imagej fiji software

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ImageJ FIJI is an open-source image processing software designed for scientific use. It provides a range of tools for image analysis, processing, and visualization. The software's core function is to enable users to view, edit, analyze, process, and enhance digital images.

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Lab products found in correlation

Zen blue software, by Adobe (2 mentions) Tcs sp5, by Leica (1 mentions) Lsm 880, by Zeiss (1 mentions) Lsm800, by Leica (1 mentions) Lsm800 confocal microscope, by Zeiss (1 mentions) Plan apochromat 63 1.4 numerical aperture oil objective, by Zeiss (1 mentions)

Spelling variants of this product

ImageJ (335 citations) Fiji/ImageJ (29 citations) FIJI software (2 citations)

2 protocols using imagej fiji software

1

Confocal Microscopy Imaging Protocol

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Scanning laser confocal experiments were acquired using a Zeiss LSM 800 or Leica TCS SP5 confocal microscope equipped with a 63× 1.4 numerical aperture oil objective. Airyscan microscopy was performed using a Zeiss LSM 880 confocal microscope, equipped with Plan‐Apochromat 63×/1.4 numerical aperture oil objective and pixel size of 8.7 nm. Images were subjected to post‐acquisition Airyscan processing. Image acquisition and processing were performed with Zen Blue software and co‐localization analysis and image presentation was performed using ImageJ FIJI software or Photoshop (Adobe).
Forrester A., De Leonibus C., Grumati P., Fasana E., Piemontese M., Staiano L., Fregno I., Raimondi A., Marazza A., Bruno G., Iavazzo M., Intartaglia D., Seczynska M., van Anken E., Conte I., De Matteis M.A., Dikic I., Molinari M, & Settembre C. (2018). A selective ER‐phagy exerts procollagen quality control via a Calnexin‐FAM134B complex. The EMBO Journal, 38(2), e99847.
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2

High-resolution Confocal Imaging Workflow

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Laser confocal experiments were acquired using a Zeiss LSM 800 confocal microscope equipped with a 63×1.4 numerical aperture oil objective. Airyscan microscopy was performed using a Zeiss LSM 800 confocal microscope, equipped with Plan-Apochromat 63×/1.4 numerical aperture oil objective and pixel size of 8.7 nm. Images were subjected to post-acquisition Airyscan processing. Image acquisition and processing were performed with Zen Blue software and co-localization analysis and image presentation was performed using Image J FIJI software or Photoshop (Adobe).
Lin Z., Ni L., Teng C., zhang z., Lu X., Xie C., Wu L., Zhou Y., Tian N., Wu Y., Sun L., Pan Z., Wang X., Lin Z., & Zhang X. (2021). Nrf2 mediated ER-phagy protects against oxidative damage in intervertebral disc degeneration.
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