The largest database of trusted experimental protocols

Rotenone

Manufactured by Tokyo Chemical Industry
Sourced in Japan

Rotenone is a chemical compound extracted from the roots of certain plants. It is a potent natural pesticide that acts as an inhibitor of mitochondrial respiration, disrupting cellular energy production. Rotenone is commonly used in scientific research and laboratory applications.

Automatically generated - may contain errors

6 protocols using rotenone

1

Liposomal Formulation and Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
L-α-phosphatidylcholine (95%) and fluorescent lipid 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine-N-(lissamine rhodamine B sulfonyl) (ammonium salt) (DOPE-RhB, >99%) were purchased from Avanti Polar Lipids, Inc. (Alabaster, AL, USA). Cholesterol (≥99%) was purchased from Sigma-Aldrich (St. Louis, MO, USA). Homologous series of IA-n(OH) (n = 10, 12, 14, 16) and TPPB-n (n = 10, 12, 14) amphiphiles were synthesized according to the published methods [70 (link),71 (link)]. Hexadecyltriphenylphosphonium bromide (TPPB-16, ≥98%) was purchased from Alfa Aesar (Haverhill, MA, USA). Rotenone (>95%) was purchased from Tokyo Chemical Industry Co., Ltd. (Tokyo, Japan). MitoTracker Green FM (98%) was used to stain mitochondria of living cells (Thermo Fisher Scientific, Waltham, MA, USA). For cellular uptake assay, 4′,6-diamidino-2-phenylindole (DAPI) was used (Sigma-Aldrich, St. Louis, MO, USA). Sodium phosphate buffer (PBS) was purchased from UralChemInvest (Ufa, Russia). Chloroform and ethanol (HPLC) were purchased from JSC №1 BASE Chemical reagents (Staraya Kupavna, Russia). Liposomal dispersions were prepared using ultrapure Milli-Q water purified by Simplicity® UV system (Millipore SAS, Molsheim, France).
+ Open protocol
+ Expand
2

Mitochondrial function and cell signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Dulbecco’s Modified Eagle’s medium (DMEM), WST-8 colorimetric reagent, and KCN were purchased from Nacalai Tesque, Inc. (Kyoto, Japan). Fetal bovine serum (FBS) and Dialyzed FBS were purchased from Equitech-Bio Inc. (Kerrville, TX, USA) and Thermo Fisher Scientific Inc. (Waltham, MA, USA), respectively. Anti-Akt, Anti-phosphorylated Akt, anti-GRP78, and anti-β-actin antibodies were obtained from Cell Signaling Technology, Inc. (Danvers, MA, USA). Horseradish peroxidase (HRP)-linked anti-rabbit IgG antibody (GE Healthcare Life Sciences, Buckinghamshire, UK) was used as secondary antibody. Mito Check Complex Activity Assay Kit (Cayman Chemical, Ann Arbor, MI, USA) was used to evaluate the effect of compound 1 on the mitochondrial complex I–V. Oxygen consumption of cells was measured by Oxygen Consumption Rate (OCR) Assay Kit (Cayman Chemical, Ann Arbor, MI, USA). Rotenone, thenoyltrifluoroacetone (TTFA), carbonyl cyanide m-chlorophenylhydrazone (CCCP), antimycin A, and oligomycin A were obtained from Tokyo Chemical Industry Co., LTD. (Tokyo, Japan), Wako Pure Chemical Industries, Ltd. (Osaka, Japan), Sigma-Aldrich (St. Louis, MO, USA), LKT Laboratories, Inc. (St. Paul, MN, USA), and Cayman Chemical (Ann Arbor, MI, USA), respectively. Other chemicals were purchased from Sigma-Aldrich (St. Louis, MO, USA) or Kishida Chemical Co., Ltd. (Osaka, Japan).
+ Open protocol
+ Expand
3

Rotenone-Induced Müller and Microglia Interaction

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mouse primary Müller cells, prepared as described previously, and mouse brain-derived microglia (BV-2) were maintained in DMEM10. Müller and BV-2 cells were seeded at 3.0 × 105 and 6.5 × 105 cells in 60 mm dishes, respectively, and cultured in media containing various concentrations of rotenone (Tokyo chemical industry, Tokyo, Japan) for 24 h. Cells were washed with DMEM10 twice to remove rotenone and were then cultured in fresh media for an additional 24 h. Culture media were collected and passed through a 0.22 µm filter (Merck Millipore, Burlington, MA, USA). To obtain double-conditioned media, Müller and BV-2 cells (1.4 × 105 and 3.0 × 105 cells, respectively) were cultured with rotenone-stimulated BV-2 and Müller cell-conditioned media (3 mL) in 35 mm dishes for 24 h, respectively.
+ Open protocol
+ Expand
4

Modulating Mitochondrial Function via ETC Inhibitors

Check if the same lab product or an alternative is used in the 5 most similar protocols
AML12 cells were cultured either with variable concentrations of rotenone (Tokyo Chemical Industry Co.), an inhibitor of mitochondrial ETC complex I, or 3-nitropropionic acid (Cayman Chemical), an inhibitor of mitochondrial ETC complex II, for 12 h. The cells were then exposed to Opti-ELF-WMF for 3 h. Mitochondrial mass was measured by MitoTracker Green, as described above.
+ Open protocol
+ Expand
5

Fluorescent Substrate Acquisition and Enzymatic Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Isopropyl-1-thio-β-D-galactopyranoside (IPTG), 5-aminolevulinic acid hydrochloride (5-ALA), and radioimmunoprecipitation (RIPA) buffer were obtained from Nacalai Tesque (Kyoto, Japan). Isoflurane, corn oil, and ampicillin (ABPC) were obtained from FUJIFILM Wako Pure Chemical Corporation (Osaka, Japan). Rotenone was obtained from Tokyo Chemical Industry Co., Ltd. (Tokyo, Japan). Glucose-6-phosphate (G6P), glucose-6-phosphate dehydrogenase (G6PDH), and nicotinamide adenine dinucleotide phosphate·4H2O (NADPH) were obtained from Oriental Yeast Company (Tokyo, Japan). Vivid® fluorescent substrates, dibenzyl-8-methyl-fluorescein (DBOMF), 7-benzyloxy-methyloxy-3-cyanocoumarin (BOMCC), and 7-ethoxy-methyloxy-3-cyanocoumarin (EOMCC), were obtained from Thermo Fisher Scientific (Waltham, MA, USA).
+ Open protocol
+ Expand
6

Mitochondrial Complex Activity Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Dulbecco’s modified Eagle’s medium (DMEM), WST-8 colorimetric reagent, and KCN were purchased from Nacalai Tesque, Inc. (Kyoto, Japan). Fetal bovine serum (FBS) and dialyzed FBS were purchased from Equitech-Bio Inc. (Kerrville, TX, USA) and Thermo Fisher Scientific Inc. (Waltham, MA, USA), respectively. The Mito Check Complex Activity Assay Kit, used to evaluate the effect of test samples on mitochondrial complexes I–V, was obtained from Cayman Chemical (Ann Arbor, MI, USA). The oxygen utilization of cells and mitochondrial membrane potential were measured by using an Oxygen Consumption Rate Assay Kit from Cayman Chemical and JC-1 MitoMP Detection Kit from Dojindo Laboratories (Kumamoto, Japan), respectively. Rotenone, thenoyltrifluoroacetone (TTFA), carbonyl cyanide m-chlorophenylhydrazone (CCCP), antimycin A, and oligomycin mixture were purchased from Tokyo Chemical Industry Co. Ltd. (Tokyo, Japan), Wako Pure Chemical Industries, Ltd. (Osaka, Japan), Sigma-Aldrich (St. Louis, MO, USA), LKT Laboratories, Inc. (St. Paul, MN, USA), and Cayman Chemical, respectively.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!