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Synergi fusion rp column

Manufactured by Phenomenex
Sourced in United States, Germany

The Synergi Fusion-RP column is a high-performance liquid chromatography (HPLC) column designed for the separation and analysis of a wide range of compounds. The column features a proprietary stationary phase that combines the benefits of reversed-phase and hydrophilic interaction liquid chromatography (HILIC) modes, allowing for the separation of both polar and non-polar analytes.

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20 protocols using synergi fusion rp column

1

HPLC-MS/MS Quantification of 6dEB

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All experiments were carried out on an Agilent 1200 HPLC system coupled to a 6460 Triple Quadrupole mass spectrometer equipped with a Jet stream ESI-source (Agilent Technologies, Waldbronn, Germany). The chromatographic separation was achieved temperature controlled at 25 °C on a Synergi Fusion-RP column (2.5 μm, 50 × 2.0 mm) equipped with a pre-column of the same material (4 × 2.0 mm) both from Phenomenex (Aschaffenburg, Germany). A gradient of mobile phase A (0.1 % formic acid) and mobile phase B (acetonitrile) was used as shown in Table S2 in the Supplementary Material (flow rate of 0.5 mL/min, injection volume of 10 μL). The MS was operated in positive ion mode with multi-reaction monitoring (MRM). The MS/MS fragmentation pattern of 6dEB and the internal standard compounds were determined and the MS parameters were optimized. The optimized source parameters are displayed in Table S3 in the Supplementary Material.
6dEB was monitored with transitions m/z 409.1 to m/z 311.2 for relative quantification and m/z 409.1 to m/z 391.2 and m/z 293.2 for identification. Collision energies for the transitions of 6dEB were 25, 21, and 25 V, respectively. Data was acquired and evaluated using the Mass Hunter software; quantitative analysis was done using Mass Hunter Quantitative Analysis (version B03.02, Agilent Technologies, Waldbronn, Germany).
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2

Isolation and Purification of Dehydroabietane

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The lyophilized biomass (9.5 g) obtained from Plectonema cf. radiosum LEGE 06105 was extracted repeatedly with a 2:1 mixture of CH2Cl2/MeOH and the resulting crude extract (0.70 g) fractionated using VLC, as detailed for the colonial Synechococcales strain LEGE 10388. Upon inspection of the VLC fractions by 1H NMR, signals consistent with the aromatic moiety of a dehydroabietane were present in fraction E (21.7 mg, eluting with 60% EtOAc in hexane), which was further separated on a SPE cartridge (Strata SI-1, 5 g, Phenomenex) as detailed above. The fraction containing the 1H NMR signals (2.4 mg, eluting with 20–25% EtOAc in hexane) was subjected to two rounds of analytical-scale HPLC purification using a Synergi Fusion-RP column (250 × 4.6 mm, 10 μ, Phenomenex). The initial separation was carried out under isocratic conditions at 99% MeCN (aq) with a flow of 1.2 mL min−1 and the peaks eluting within tR = 1–7 min were re-injected into the HPLC system and separated isocratically using 75% MeCN (aq), to yield pure 1 (0.5 mg, tR = 9.6 min).
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3

Kinetic Analysis of His6-ElxO Reduction

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Wild type or mutant His6-ElxO
(2 or 10 μM) and
purified peptide (0.1 to 5 mM) were incubated with NADPH (2.5 mM)
in assay buffer (100 mM HEPES, 500 mM NaCl, pH 7.5) at 25 °C.
Reaction progress was monitored by UV spectrophotometry to measure
initial rates, measuring the disappearance of NADPH absorbance at
340 nm. Formation of reduced peptides was confirmed by LC-MS using
an Agilent 1200 instrument equipped with a single quadruple multimode
ESI/APCI ion source mass spectrometry detector and a Synergi Fusion-RP
column (4.6 mm × 150 mm, Phenomenex). The mobile phase was 0.1%
(v/v) formic acid in water (A) and methanol (B). A gradient of 0–70%
(v/v) B in A over 30 min and a flow rate of 0.5 mL min–1 were used.
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4

Quantification of Lovastatin Residues in Tissues

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For the determination of lovastatin residues in muscle and organ (kidney, liver, brain) tissues, 1 g of the samples were each ground to homogeneity with 5 mL of methanol. The extracts were then dried at 70 °C for 10 hours before re-suspension with 60% acetonitrile and centrifuged at 20,000 g for 20 min. The upper layer of the extract was analyzed for lovastatin residues using HPLC performed according to the method as described previously [15 ]. Since the concentration of lovastatin residues in all samples were below the detectable level (1 μg) by HPLC, one sample of each tissue from the highest lovastatin treatment group (6 mg/kg BW) were sent for further analysis using Trap Liquid Chromatography Tandem Mass Spectrometer (LCMS/MS) (AB Sciex 3200Q) (Toronto, Canada) coupled with Perkin Elmer Flexar FX15 Ultra High Performance Liquid Chromatography (UHPLC) system (Massachusetts, USA). The LCMS was equipped with Synergi Fusion RP column (Phenomenex, 100 mm x 2.0 mm x 4 μM). The mobile phases were water with 0.1% formic acid (mobile phase A) and acetonitrile with 0.1% formic acid (mobile phase B), with total run time of 8 minutes. Chromatography was achieved with Multiple Reaction Monitor (MRM) method. The gradient run program was set at 10% to 90% mobile phase B from 0.01 min to 4 min, and hold for 1 min, before going back to 10% mobile phase B and re-equilibrated for 3 min.
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5

Quantitative Mass Spectrometry of Nucleosides

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For quantitative mass spectrometry, an Agilent 1290 Infinity II equipped with a diode-array detector (DAD) combined with an Agilent Technologies G6470A Triple Quad system and electrospray ionization (ESI-MS, Agilent Jetstream) was used.
Nucleosides were separated using a Synergi Fusion-RP column (Synergi® 2.5 μm Fusion-RP 100 Å, 150 × 2.0 mm, Phenomenex®, Torrance, CA, USA). LC buffer consisting of 5 mM NH4OAc pH 5.3 (buffer A) and pure acetonitrile (buffer B) were used as buffers. The gradient starts with 100% buffer A for 1 min, followed by an increase to 10% buffer B over a period of 4 min. Buffer B is then increased to 40% over 2 min and maintained for 1 min before switching back to 100% buffer A over a period of 0.5 min and re-equilibrating the column for 2.5 min. The total time is 11 min and the flow rate is 0.35 mL min−1 at a column temperature of 35 °C.
An ESI source was used for the ionization of the nucleosides (ESI-MS, Agilent Jetstream). The gas temperature (N2) was 230 °C with a flow rate of 6 L min−1. Sheath gas temperature was 400 °C with a flow rate of 12 L min−1. Capillary voltage was 2500 V, skimmer voltage was 15 V, nozzle voltage was 0 V, and nebulizer pressure was 40 Psi. The cell accelerator voltage was 5 V. All methods were performed in the DMRM and positive ion mode.
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6

Phytochemical Screening of VPME Stem Bark

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The preliminary phytochemical screening of the VPME stem bark was carried out according to the method described by Harborne.[13 ]
High-resolution mass spectra were recorded using a linear trap quadrupole orbitrap spectrometer equipped with an atmospheric pressure chemical ionization ion source (Ion Max) operating in positive mode. The spectrometer was equipped with a surveyor HPLC system consisting of LC-pump, photodiode array detector, and auto-sampler (injection volume 10 μL). Nitrogen was employed both as the sheath (40 arbitrary units) and auxiliary (10 arbitrary units) gas. The capillary temperature was set to 190°C. The vaporizer temperature was set to 400°C. The separations were performed using a Phenomenex Synergi Fusion RP column (4 μm, 3 mm × 150 mm) with water (+0.1% HCOOH/+10 mM NH4AC) (A) acetonitrile (+0.1% HCOOH) (B) gradient (flow rate 500 μL/min). Samples were analyzed using a gradient program as follows: 80% A isocratic for 4 min, linear gradient to 0% A over 20 min, after 100% B isocratic for 10 min, the system returned to its initial condition (80% A) within 1-min, and was equilibrated for 5 min.
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7

Qualitative HPLC-PDA/UV-ESI-MS/MS Analysis

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Qualitative HPLC-PDA/UV-ESI-MS/MS analyses were performed using a Surveyor LC pump, a Surveyor autosampler, coupled with a Surveyor PDA detector, and a LCQ Advantage ion trap mass spectrometer (ThermoFinnigan) equipped with Xcalibur 3.1 software. Analyses were performed using a 4.6 × 250 mm, 4 µm, Synergi Fusion-RP column (Phenomenex). The eluent was a mixture of methanol (solvent A) and a 0.1% v/v aqueous solution of formic acid (solvent B). A linear gradient of increasing 55% to 85% A was developed within 45 min. The column was successively washed for 15 min with methanol and equilibrated with 55% A for 10 min. Elution was performed at a flow rate of 0.8 ml/min with a splitting system of 2:8 to MS detector (160 ml/min) and PDA detector (640 ml/min), respectively. The volume of the injected methanol solutions was 20 μl. Analyses were performed with an ESI interface in the positive mode. The ionization conditions were optimized and the parameters used were as follows: capillary temperature, 270 °C; capillary voltage, 29.0 V; tube lens offset, 50.0 V; sheath gas flow rate, 60.00 arbitrary units; auxiliary gas flow rate, 3.00 arbitrary units; spray voltage, 4.50 kV; scan range of m/z 150–1200. N2 was used as the sheath and auxiliary gas. PDA data were recorded with 200–600 nm range with preferential channel as the detection wavelength 260 nm.
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8

Caffeine Metabolite Separation and Analysis

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Caffeine and 11 downstream metabolites were separated by high-performance liquid chromatography (Gilson, Middleton, WI) using a Synergi Fusion RP column (100 × 3.0 mm, 2.5 μm particle, 100 Å; Phenomenex, Torrance, CA). Column temperature was set at 50°C. The high-performance liquid chromatography system was connected to TSQ Quantum Ultra AM mass spectrometer (Thermo Fisher Scientific; Waltham, MA). The target compounds were analyzed in selected reaction monitoring positive ionization mode.
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9

Quantification of Acrylamide in Foods

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The standards and extracts were injected into the Agilent 1290 Infinity UHPLC system via a Phenomenex Synergi Fusion RP column (2.1 × 100 mm, 3 μm) (Phenomenex, Torrance, CA, USA). The AB SCIEX QTRAP® 5500, which was operated in the MRM mode, was used to detect acrylamide. The Turbo VTM source was used with an ESI probe in positive polarity. The calibration standards comprised of acrylamide at five different levels: 1, 50, 250, 500, and 1000 ng g−1. 13C3-labeled acrylamide at a concentration of 50 ng g−1 was added to the calibration standards. The injection volume was set to 20 μL.
Acrylamide was separated under gradient conditions using water with 0.1% formic acid and 5 mM ammonium formate (A) and acetonitrile with 0.1% formic acid and 5 mM ammonium formate (B) as the mobile phases at a flow rate 250 μL/min. The gradient programme for acrylamide quantification using LC-MS/MS was 10% B to 90% B from 0.01 min to 4.0 min, hold for 1 min and back to 10% B in 0.1 min and reequilibration for 3 min. The run time for the analysis was 8 min.
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10

Quantification of Quinidine in Dialysate

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Identification of the quinidine (QND) concentration in the dialysate samples was performed on a Sciex 6500 QTrap hybrid tandem mass spectrometer coupled to an Agilent 1100 HPLC system. Electrospray ionization was used in positive ion detection mode with MRM transitions of 325.2/307.2 (quantifier) and 325.2/172 (qualifier) with a collision energy of 31 and 45 V, respectively. The dwell time of the transitions was 300 ms. Source conditions were: curtain gas: 45 arbitrary unit (au), spray voltage: 5,000 V, source temperature: 450°C, nebulizer gas: 40 au, drying gas: 40 au, and declustering potential: 171 V. The samples were introduced to the system via an HPLC system consisting of a binary pump, an autosampler, and a column compartment unit. A Phenomenex Synergi Fusion RP column (50 mm × 2 mm, 4 μm, 80 Å) column was applied for the separation using 0.1% formic acid in water as eluent A and 0.1% formic acid containing acetonitrile as eluent B in gradient elution mode. The gradient started at 90% of eluent A, and the eluent B was increased to 95% by 3 min and kept at that concentration for 0.5 min then decreased to the initial composition by 0.3 min and kept there for 2.2 min. The overall run time was 6 min. Then, 10 μl of samples was injected. The column was kept at ambient temperature. A 5-point calibration curve was used in the range of 0.1–100 ng/ml.
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