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41 protocols using mia paca 2

1

Pancreatic Cancer Cell Line Cultures

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SW-1990, PSN-1, BxPC3 and PANC-1 cell lines were purchased from ATCC. MIA PaCa-2 and KP4 were purchased from Sigma-Aldrich and Accegen, respectively. MIA PaCa-2, PANC-1, SW-1990 were cultured in DMEM (Sigma-Aldrich) whereas PSN-1, BxPC3 and KP4 were cultured in RPMI1640 (Sigma-Aldrich). Both the Medias were supplemented with 10% Fetal Bovine Serum (Gibco) and 5% Penicillin-Streptomycin (Sigma-Aldrich). Cell lines were maintained at 37 °C with 5% CO2 in a cell culture incubator. Gemcitabine Hydrochloride was procured from Sigma Aldrich (catalogue number: G6423). PAK4 inhibitors (KPT-9274, catalogue number: S8444 and PF-3758309, catalogue number: S7094) were procured from Selleckchem.
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2

Culturing Human Pancreatic Cancer Cell Lines

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Human pancreatic cancer cell lines (AsPC-1, BxPC-3, and MIAPaCa-2) were obtained from American Type Culture Collection (Manassas, VA, USA). MIAPaCa-2 cells were maintained in D-MEM medium (Sigma, St. Louis, MO, USA) supplemented with 5% fetal bovine serum (Sigma) in a humidified incubator maintained at 37°C with 5% CO2. AsPC-1 and BxPC-3 cells were maintained in RPMI 1640 medium (Wako Pure Chemical Industries, Osaka, Japan) supplemented with 10% fetal bovine serum.
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3

Cell Line Characterization and Manipulation

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The human breast cancer lines MDA-MB-157, MDA-MB-231, MDA-MB-468 and MCF7, the human pancreas cancer cell line MIAPaCa2 and the human gastric cancer cell line MKN45 were purchased from ATCC (Manassas, VA, USA). MDA-MB-157 cells were cultured in Roswell Park Memorial Institute-1640 (Sigma-Aldrich, St Louis, MO, USA) and MDA-MB-231, MDA-MB-468, MCF7, MIAPaCa2 and MKN45 cells were cultured in Dulbecco's modified Eagle's medium (DMEM; Sigma-Aldrich) supplemented with 10% fetal calf serum (FCS) at 37 °C in 5% CO2. Short-hairpin RNA for human ERO1-α (TR313168) was purchased from OriGene (Rockville, MD, USA) and transfected to MDA-MB-231, MCF7 and MIAPaCa2 cells using Lipofectamine 2000 (Life Technologies, Carlsbad, CA, USA). To establish cells with ERO1-α-overexpression, MDA-MB-231 cells were transfected with human ERO1-α cDNA using Lipofectamine 2000 (Life Technologies) as per the manufacturer's instructions. Cells were stably propagated under puromycin selection (1 or 2 μg ml−l). The ERO1-α inhibitor EN460 was purchased from Millipore (Billerica, MA, USA).
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Culturing Diverse Cancer Cell Lines

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The human mammary epithelial cell line MCF10A; breast cancer cell lines MDA-MB-436, MDA-MB-231, MDA-MB-453, BT-20, HCC1937, SKBR3, T47D, and HEK293; normal HPDE cells; and human PDAC cell lines PANC1, BxPC-3, MiaPaCa-2, and Capan-2 were purchased from the American Type Culture Collection (Manassas, VA). All breast cancer cells and PANC1 and MiaPaCa-2 cells were cultured in DMEM/F12 (Sigma, St. Louis, MO). BxPC-3 and Capan-2 cells were cultured in RPMI-1640 medium supplemented with 10% fetal bovine serum (FBS) and a 100-U/mL penicillin-streptomycin solution (Sigma). All media were supplemented with 10% FBS and a 100-U/mL penicillin-streptomycin solution. MCF-10A cells were maintained in a nutrient mixture consisting of DMEM/F12 supplemented with 5% horse serum, epidermal growth factor, hydrocortisone, insulin, and cholera toxin. All cultured cells were incubated at 37°C in a water-saturated 95% air-5% CO2 atmosphere.
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5

Cell Culture of Cancer Cell Lines

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The following cell lines were used in this study: MDA-MB231 human TNBCs (ATCC, Manassas, VA, USA), MIA PaCa2 (RIKEN, Tsukuba, Japan) and PANC1 (RIKEN) human pancreatic cancers, DLD1 human colon cancers (ATCC), A375 (ATCC), Bowes (ATCC), and A2058 (Japanese Collection of Research Bioresources, Osaka, Japan) human melanomas. MDA-MB231, MIA PaCa-2, A375, and A2058 cells were maintained and passaged in Dulbecco’s modified Eagle’s medium (DMEM; Sigma-Aldrich, St. Louis, MO, USA) supplemented with 10% fetal bovine serum (FBS; Sigma-Aldrich) and 1% penicillin/streptomycin (50 U/mL; Gibco, Grand Island, NY, USA). Bowes cells were maintained and passaged in minimum Eagle’s medium (MEM; Sigma-Aldrich) supplemented with 10% FBS and 1% penicillin/streptomycin. PANC1 and DLD1 cells were maintained and passaged in RPMI-1640 medium (Sigma-Aldrich) supplemented with 10% FBS and 1% penicillin/streptomycin. All cells were cultured at 37°C in a humidified atmosphere with 5% CO2 and were regularly tested to ensure the absence of mycoplasma contamination.
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6

Sourcing and Culturing Pancreatic Cell Lines

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MIA PaCa-2 and PANC-1 were purchased from ATCC. Human pancreatic ductal epithelial cells (HPDE) and human pancreatic stellate cells (hPSC) were a kind gift from Diane Simeone (University of Michigan) and David Yule (University of Rochester), respectively. MIA PaCa-2, PANC-1, and hPSC were cultured in DMEM media supplemented with 10% fetal bovine serum and 1% penicillin/streptomycin (Sigma–Aldrich, Gillingham, UK). HPDE were cultured in Keratinocyte-SFM media (Fisher Scientific, Loughborough, UK). All cells were cultured under 5% CO2 (g), at 37 °C. Mycoplasma contaminations were screened by DAPI/Hoechst 33,342 staining [81 (link)] using a Zeiss Axioimager.D2 upright microscope using a 100×/1.4 Plan Apochromat (Oil) on a DAPI bandpass filter set (Carl Zeiss Ltd., Oberkochen, Germany) or submitted to the University of Manchester FBMH Media Order services for PCR-based detection method.
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7

Cultivation of PDAC Cell Lines and Fibroblasts

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Human PDAC cell lines MIA PaCa-2 and Capan-1 were purchased from ATCC (Manassas, VA, USA). Normal fibroblasts (NFs, id = 6 and 11) were obtained from patients undergoing surgery for PDAC as described previously [9 (link)]. Three pancreatic fibroblasts (PFs, id = 10295, 14289 and 14358) were purchased from ScienCell Research Laboratories (Carlsbad, CA, USA) (Catalog #3830).
Capan-1 and MIA PaCa-2 were cultured in a Dulbecco’s modified Eagle medium (DMEM) (Sigma-Aldrich, St. Louis, MO, USA) supplemented with 10% fetal bovine serum (FBS) (Gibco, Palo Alto, CA, USA), 100 U/mL penicillin, and 100 μg/mL streptomycin (Sigma-Aldrich, St. Louis, MO, USA) at 37 °C in 5% CO2. PFs were maintained in a Stellate Cell Medium (ScienCell Research Laboratories, Carlsbad, CA, USA) at 37 °C in 5% CO2, while NFs were maintained in an MF-medium (Toyobo, Tokyo, Japan).
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8

Culturing Human Pancreatic Cancer Cell Lines

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The human pancreatic cancer cell lines AsPC-1, BxPC-3, Panc-1 and MiaPaCa-2 were obtained from ATCC (Manassas, VA, USA). AsPC-1 was maintained in RPMI-1640 culture medium (Sigma-Aldrich, Tokyo, Japan) and BxPC-3, Panc-1 and MiaPaCa-2 were maintained in DMEM culture medium (Sigma-Aldrich). Each culture medium was supplemented with 10% FBS, 100 U/ml penicillin, and 100 µg/ml streptomycin. All cells were cultured in a humidified incubator containing 5% CO2 in air at 37°C.
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9

In Vitro Evaluation of SPION Effects

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6 human cancer cell lines were selected to be investigated in vitro; H460 (large cell lung cancer), MiaPaCa2 (pancreatic carcinoma), DU145 (prostate carcinoma), MCF7 (breast adenocarcinoma), U87 (brain glioblastoma) and HEPG2 (liver carcinoma). All cell lines were acquired from the American Type Culture Collection (ATCC), and were routinely tested for mycoplasma. All cell lines have also been authenticated by ATCC using Short Tandem Repeat (STR) Screening. Cells were incubated at 37 °C in 5% CO2, and all tissue culture was performed in a Class II laminar flow cabinet (Thermo, US). All cell lines, except for MiaPaCa2, were cultured in Dulbecco’s Modified Eagle Media (DMEM) (Sigma, US), supplemented with 10% Foetal Bovine Serum (FBS) (Sigma, US) and 1% Penicillin Streptomycin (Pen-Strep) (Sigma, US). MiaPaCa2 cells were incubated in High Glucose DMEM media, supplemented with 10% FBS, 1% Pen-Strep, and 0.2% Sodium Pyruvate. Cells were passaged every 2–3 days to maintain exponential grown.
NPs used for this study were SPIONs with a 5 nm diameter, acquired from Sigma, US (product number 725331), suspended in H2O at a concentration of 5 mg/ml, with the molecular weight of Fe3O4 being 231.53 g/mol. For the purpose of this study, all assays were performed at a SPION concentration of 23.5 μg/ml, which was determined as being within the range investigated by Kirakli et al. [56 (link)].
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10

Established Pancreatic Cancer Cell Lines

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The human pancreatic cell lines, PANC-1, MIA PaCa-2, Capan-1, AsPC-1, CFPAC-1, and Hs766T, were obtained from the American Type Culture Collection (Manassas, VA, U.S.A) The PANC-1 and MIA PaCa-2 in Dulbecco’s Modified Eagle Medium (DMEM: Sigma-Aldrich, St Louis, MO, USA) with 10% fetal bovine serum (FBS) and antibiotics (1% penicillin and streptomycin), CFPAC-1 and Capan-2 in Iscove’s Modified Dulbecco’s Medium (IMDM: Thermo Fisher Scientific, Waltham, MA, USA) with 10% FBS and antibiotics, and AsPC-1 cells in RPMI-1640 medium (Thermo Fisher Scientific) with 10% FBS and antibiotics. Mouse primary pancreatic cells were cultured and maintained as described previously [26 (link)]. Murine PDAC (KPC1) and paired metastases (KPC1Liv) cell lines were provided by Dr. Sunil Hingorani (University of Washington). In brief, KPC1 cell lines were established from primary PDAC of a genetically engineered mouse model of PDAC (LSL-KrasG12D/+;p53R172H/+;Pdx1-cre) [32 (link)], whereas the KPC1Liv cell lines were isolated from paired liver metastases arising in KPC1 mice. KPCY cells are derived from a Pdx1-cre;LSL-KrasG12D/+;p53fl/+;R26YFP mouse (KPCY mice) and were provided by Dr. Andrew D. Rhim (The University of Texas MD Anderson Cancer Center).
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