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19 protocols using ab178876

1

Ovarian Cancer Cell Protein Analysis

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Ovarian cancer cells were disrupted using cell lysis buffer (Promega) on ice for 30 min and centrifuged at 12000 rpm for 30 min. The supernatant was transferred into the new centrifuge tube, and the concentration of protein samples was detected using the BCA-200 Protein Assay kit (Pierce, Rockford, IL, USA). Protein samples were separated by 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) gel and transferred to the polyvinylidene fluoride (PVDF) membrane (Millipore). The non-specific sites in the membrane were blocked using 5% skim milk for 1 h, followed by incubation with primary antibodies and horseradish peroxidase (HRP)-labeled secondary antibody. The blots were visualized using the enhanced chemiluminescent (ECL) system (Beyotime, Shanghai, China). The primary antibodies, including phosphorylated extracellular regulated MAP kinase (p-ERK; ab214036), ERK (ab17942), p-MAP kinse-ERK kinase (p-MEK; ab96379), MEK (ab178876) and GAPDH (ab181602) were purchased from Abcam (Cambridge, MA, USA).
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2

Immunoblot Analysis of Microglia and Brain

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Immunoblot analysis was performed as previously described29 (link) with the following sample preparation specification. Primary microglia were washed in 4 °C DPBS and then incubated in Pierce RIPA lysis buffer supplemented with 1× Halt Protease and phosphatase inhibitors (complete RIPA; Thermo Fisher Scientific) for 15 min at 4 °C. For brain samples, cortices were dissected from PBS-perfused 12-month-old male and female mice. Tissues were incubated in complete RIPA for 30 min at 4 °C. Primary antibodies were: p-NCF2 (1:1000, rabbit polyclonal, PA5-105094, Thermo Fisher Scientific); NCF2 (1:1000, rabbit polyclonal, PA5-37323, Thermo Fisher Scientific), p-PXN (1:1000, rabbit polyclonal, PAB7932, Abnova), paxillin (1:1000, rabbit monoclonal, ab32115, Abcam), p-MEK2 (1:1000, rabbit polyclonal, 28955-1-AP, Thermo Fisher Scientific), MEK1/2 (1:10,000, rabbit monoclonal, ab178876, Abcam) and GAPDH (1:10,000, rabbit monoclonal, 2118, Cell Signaling Technology). Primary antibodies were visualized with horseradish peroxidase-conjugated secondaries (Cell Signaling Technology) and ECL reagents. Densitometry was performed using NIH ImageJ (v.1.50), with protein values for each band normalized to GAPDH from the same membrane.
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3

Immunoblotting Analysis of EMT Markers

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Cells in experimental and control groups were lyzed and centrifuged. After determined the protein concentrations, the cell lysate samples (30 μg/lane) were separated by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) on 10% gels and transferred onto NC membranes. The membranes were blocked with 5% BSA in TBST and immunoblotted by the primary antibodies. The primary antibodies used in this study were:anti-GALNT6 (1:1000, sc-100755, Santa Cruz Biotechnology), anti-E-cadherin (1:500, 13-1700, Invitrogen), anti-N-cadherin (1:200, sc-393933, Santa Cruz Biotechnology), anti-Slug (1:500, ab27568, Abcam), anti-GRP78 (1:1000, ab21685, Abcam), anti-phospho-MEK1/2 (1:1000, #9154, CST), anti-MEK1/2 (1:1000, ab178876, Abcam), anti-phospho-ERK1/2 (1:1000, #4370, CST), anti-ERK1/2 (1:1000, #4695, CST), biotinylated anti-Viciavillosa agglutinin (specific to GalNAc-Ser/Thr) (VVA, 1:1000, B-1235, Vector) and anti-GAPDH (1:2000, 10494-1-AP, Proteintech). The secondary antibodies were HRP-conjugated Affinipure Goat Anti-Mouse IgG (1:5000, SA00001-1, Proteintech), HRP-conjugated Affinipure Goat Anti-Rabbit IgG (1:5000, SA00001-2, Proteintech) and HRP-streptavidin (1:10000, SA-5014, Vector). The protein bands were visualized by enhanced chemiluminescent reagents (Advansta) and the intensity of protein band was quantified by ImageJ software.
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4

Apatinib and Pemetrexed Combination Therapy

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Apatinib mesylate (Heng Rui) were grinded into powder and dissolved 0.5%CMC (Solrbio). Pemetrexed (Qi Lu) were dissolved 0.9% saline. Primary antibodies against AKT (ab8805), phospho‐AKT (ab8932), ERK (ab54230), phospho‐ERK (ab201015), mTOR (ab2732), phospho‐mTOR (ab84400), MEK (ab178876), phospho‐MEK (ab194754), HIF‐1α (ab51608), CD31 (ab28364), α‐SMA (ab5694), collagen IV (ab6586), MMP2 (ab37150), MMP‐9 (ab38898), and β‐actin (ab8227) were purchased from abcam. Primary antibodies against cleaved‐caspase3 (9664), ki67 (9449), and anti‐rabbit or anti‐mouse IgG horseradish peroxidase (HRP)‐linked secondary antibodies were purchased from Cell Signaling Technology.
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5

Endometrial Protein Expression Analysis

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The endometrial tissues of rats stored in liquid nitrogen were obtained and total protein was extracted. The protein concentration was determined using the bicinchoninic acid assay protein extraction and detection kit. After subjecting the samples to electrophoresis, the proteins were transferred to polyvinylidene difluoride (PVDF) membranes. The blot was incubated in a 4℃ shaker overnight with the following primary antibodies: MEK1/2 (1:20,000, ab178876; Abcam), ERK1/2 (1:1,000, ab17942; Abcam), NF-κBp65 (1:1,000, ab86299; Abcam) PCNA (1:1,000, 24036-1-AP; Proteintech), MMP9 (1:500, 27306-1-AP; Proteintech), and beta-actin (1:5,000, AF7018; Affinity). The blot was then washed and incubated with the corresponding HRP-labeled anti-rabbit secondary antibody (1 × 10,000). An appropriate amount of enhanced chemiluminescence enhancer was placed on the PVDF film and Bio-Rad was used as the imaging instrument for development exposure. The intensity of the gray value of the target band was analyzed using ImageJ software.
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6

Antibody-based Signaling Pathway Analysis

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Antibodies against PCNA (2586), phosphor-MEK1/2 (9154), phosphor-p90RSK (11989) and phosphor-MSK1 (9595) were obtained from Cell Signaling Technology (CST, MA, USA). Antibodies against AdipoR1 (ab126611), p90RSK (ab32114), cyclinD1 (ab134175), CDK4 (ab108357), CDK6 (ab124821), total-ERK1/2 (ab184699), phospho-ERK1/ (ab76299) and total-MEK1/2 (ab178876) were obtained from Abcam (Cambridge, UK). Recombinant human adiponectin (1065-AP) and recombinant human epidermal growth factor (EGF, 236-EG) were obtained from R&D System.
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7

Protein Expression in ccRCC Cells

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Total protein of ccRCC cells and tissues is obtained using RIPA lysis buffer containing protease inhibitors, and BCA protein assay Kit is used to quantitate the protein levels. Then, Western Blot is used to detect the protein expression of ZNF582, TJP2, ERK2, p-ERK2, MEK1/2, p-MEK1/2, BCL-2, Caspase-3, Cleaved Caspase-3, E-cadherin and N-cadherin in these samples. The details of these antibodies were as follows: anti-ZNF582 (1:1000, SAB1408372, Sigma), anti-Flag (1:1000, 14793 S, CST), anti-TJP2 (1:1000, 18900-1-AP, Proteintech), anti-ERK2 (1:1000, ab32081, Abcam), anti-ERK1 (pT202/pY204) + ERK2 (pT185/pY187) (1:5000, ab76299, Abcam), anti-MEK1 + MEK2 (1:20000, ab178876, Abcam), anti-MEK1 + MEK2 (phospho S217 + S221) (1:5000, ab278723, Abcam), anti-BCL-2 (1:2000, 12789-1-AP, Proteintech), anti-Caspase-3 (1:1000, 9662 S, CST), anti-Cleaved Caspase-3 (1:1000, AF7022, Affinity), anti-E-cadherin (1:10000, ab40772, Abcam), anti-N-cadherin (1:1000, 9664 S, CST) and anti-GAPDH (1:8000, 10494-1-AP, Proteintech).
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8

Adiponectin Signaling Pathway Analysis

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Antibodies of Cleaved-caspase 3 (9661), caspase 3 (9662), PCNA (2586), phospho-MEK1/2 (9154), phospho-p90RSK (11989), phospho-MSK1 (9595), phospho-p38 MAPK (9211), Bax (2774) and Bcl-2 (2872) were obtained from Cell Signaling Technology (CST, MA, USA). Antibodies of AdipoR1 (ab126611), AdipoR2 (ab189446), p90RSK (ab32114), cyclinD1 (ab134175), total-ERK1/2 (ab184699), phospho-ERK1/ (ab76299), total-MEK1/2 (ab178876), phospho-AMPK (ab133448) and phospho-mTOR (ab109268) were obtained from Abcam (Cambridge, UK).
Recombinant human adiponectin (1065-AP), recombinant mouse adiponectin (5095-AC) and recombinant human epidermal growth factor (236-EG) were obtained from R&D System. MEK1/2 inhibitor U0126 was obtained from CST (9911).
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9

Western Blot Analysis of Signaling Proteins

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Proteins were extracted from snap-frozen heart tissue using a RIPA buffer (P0013B; Beyotime Biotechnology). A bicinchoninic acid (BCA) protein analysis kit (P0010S; Beyotime Biotechnology) was used to quantify the amount of protein, and then the protein concentrations were normalized before all Western blot experiments. Equal amounts of protein were separated by 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and transferred onto a nitrocellulose membrane. Subsequently, these membranes were blocked with non-fat milk for 1 h at room temperature, followed by overnight incubation at 4°C with primary antibodies against MEK (ab178876, 1:20,000; Abcam), ERK (ab36991, 1:2,000; Abcam), p-ERK (Thr202/Tyr204) (#4376, 1:1,000; CST), and GAPDH (60004-1-Ig, 1:2,000; Proteintech). The membranes were then incubated with horseradish peroxidase-conjugated secondary antibodies (SA00001-1, 1:20,000; Proteintech) for 1 h at room temperature. The membranes were developed with chemiluminescence reagents (P0019; Beyotime Biotechnology), the chemiluminescence signals were analyzed using an Azure Biosystems C600 imager (Azure Biosystems Inc., CA, United States).
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10

Protein Expression Analysis in HCC

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HCC tissues and cell lines were lysed using M-PER mammalian protein extraction reagent (Pierce, Thermo Fisher Scientific, Inc.) containing the protease inhibitors following the standard procedures. Protein samples (40 μg) were separated in 4–12% SDS–PAGE gel and transferred onto a nitrocellulose membrane (Amersham Pharmacia Biotech, San Francisco, CA). Western blotting was performed according to the manufacturer’s protocols. The following antibodies purchased from Abcam were used in this study: Syncytin-1 (1:2000, ab179693), MEK1/2 (1:5000, ab178876), p-MEK1/2 (S218 + S222) (1:1000, ab194754), c-fos (1:2000, ab208942), c-myc (1:1000, ab32072), c-jun (1:1000, ab31419), CCND1 (1:2000, ab40754), CDK4 (1:1000, ab108357), rabbit IgG (1:2000, ab6721), and β-actin (1:5000, ab227387). ERK1/2 (1:1000, A10613), and p-ERK1 (T202/Y204)/ERK2 (T185/Y187) (1:1000, AP0472) were from ABclonal Technology. β-actin was used as an internal control. The immunoreactive bands were visualized using an ECL reagent (Pierce) according to the manufacturer’s recommendation. The bands were quantified by densitometry with ImageJ software (U. S. National Institutes of Health, Bethesda, MD, USA).
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