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7 protocols using pclamp software package

1

LFP Recordings of Hippocampal and Cortical Gamma Oscillations

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Local field potential (LFP) recordings were obtained in an interface chamber from the stratum pyramidale of the hippocampus (area CA3), the EC (mEC and lEC) and the temporal-associated cortex. Kainic acid (KA) (200 nM) was applied in the bath to induce network gamma frequency oscillations. Field oscillations were low-pass filtered at 1 kHz, digitized at 10 kHz (Digidata 1322, Axon Instruments), and analyzed with the pClamp software package (Axon Instruments). Oscillatory peak frequency was determined by averaging several consecutive Fourier transforms contained within a 20 to 30 s epoch. A Student´s t-test was used for statistical comparisons; differences were considered significant if p < 0.05. Average values are expressed as mean ± SEM.
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2

Patch-Clamp Analysis of Ion Channels

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Patch-clamp analysis was performed according to a previously published protocol [19 (link)], with slight experiment-specific adaptions. Procedures were conducted as follows. Electrophysiological recording was performed in a whole-cell configuration using an Axopatch 200A patch clamp amplifier (Axon Instruments, Foster City). Patch pipettes with resistances of 1 to 4 MΩ were made from borosilicate glass (GC150F-7.5, Clark Electromedical Instruments, UK) and filled with pipette solution. All data were digitized using a DIGIDATA 1200 interface (Axon Instruments, Foster City), smoothed by means of a four-pole Bessel filter, and saved to disc. Current traces were sampled at 10 kHz and filtered at 2 kHz. The pClamp software package (version 10.0 Axon Instruments, Inc.) was used for data acquisition. Microcal Origin 7.0 was used for analysis. If not otherwise mentioned, reagents were obtained from Sigma-Aldrich. Inward current of voltage-dependent Cav channels was evoked by applying 500-ms depolarizing pulses from a holding potential of − 50 to 50 mV. Superimposed current traces of Kv channels were evoked by step depolarizing pulses between − 80 and 60 mV in steps of 20 mV from a holding potential of − 80 mV in MPC, MPC-SMC, and hBd-SMC.
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3

Extracellular and Intracellular Recordings of DE-3

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Extracellular DE-3 activity was recorded using a suction electrode placed on the distal end of the DP nerve; suction electrodes were made in-house, and had a tip diameter of ca. 50 μm. Signals were amplified by a Model 1700 A-M Systems differential A-C amplifier, and digitized by an Axon CNS Digidata 1440A (Molecular Devices). Intracellular sharp recordings of DE-3 activity were performed using glass electrodes pulled to a resistance of 25–60 MΩ with a micropipette puller (Sutter Instrument Co, model P-87) and filled with 2 m potassium acetate. Signals were amplified by an IX2-700 dual intracellular preamp (Dagan Corp.) and digitized as previously described. All signals were recorded with the pClamp software package (Molecular Devices), and imported into MATLAB (MathWorks) for analysis. Extracellular DE-3 activity was identified as the largest spontaneously active unit in the DP recording; somatic intracellular recordings were confirmed to be DE-3 by the cell’s size and position, and the correspondence of intracellular and extracellular spikes. The rising phase of the DE-3 extracellularly recorded action potential was typically negative in our recordings; extracellular traces in all figures were inverted for more intuitive viewing. By convention, we have omitted vertical scale bars from extracellular traces because of our use of an AC-coupled amplifier.
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4

Patch Clamp Recording of Ion Channel Activity

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Borosilicate glass capillaries (1B150F-4, World Precision Instruments) were pulled to diameters resulting in resistances of 1–2 or 5–6 MΩ for macroscopic and single channel recordings, respectively. Pipettes were coated with Sylgard 184 (Dow Chemical Corp.) and fire-polished. Currents were recorded in the inside-out patch configuration using an Axopatch 200B amplifier (Molecular Devices) and the Clampex program from the pClamp software package (Molecular Devices). Gigaohm seals were formed in frog Ringer (in mM, 115 NaCl, 2.5 KCl, 1.8 CaCl2, 10 HEPES, pH 7.4) and, after patch excision, moved into flowing test solutions. The pipette/extracellular solution was (in mM): 140 K-methanesulfonate, 20 KOH, 10 HEPES, 2 MgCl2, pH 7.0. Test solutions of different Ca2+ contained28 (link) 140 mM methanesulfonate, 20 mM KOH, 10 mM HEPES with pH adjusted to 7.028 (link). HEDTA was used for 10 μM Ca2+ and 5 mM EGTA for 0 μM Ca2+solutions. The 10 μM Ca2+ solution was titrated to appropriate pCa with Ca-MES and calibrated against solutions of defined Ca2+ concentrations (World Precision Instruments) using a Ca2+-sensitive electrode. Test solutions were applied directly to patches via a large bore pipette tip containing multiple independent solution lines. All experiments were at room temperature (~22–25 °C).
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5

Electrophysiological Recordings in BeWo Cells

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All currents were recorded in either outside-out or whole-cell configurations on BeWo cells using an Axopatch 200B amplifier (Molecular Devices) and the pClamp software package (Molecular Devices). The glass pipettes were pulled from borosilicate capillaries (Sutter Instruments) and fire-polished using a microforge (Narishge) to reach resistance of 2–3 MΩ. The pipette solution contained (in mM): 140 CsCl, 10 HEPES, 1 MgCl2, adjusted to pH 7.2 (CsOH), 0.2 or 2 mM EGTA or 2 mM BAPTA as indicated. The bath solution contained 140 CsCl, 10 HEPES, 0 or 2.5 CaCl2 as indicated, adjusted to pH 7.4 (CsOH). Pharmacological reagents were applied from extracellular side including 30 nM GSK101 (Sigma-Aldrich, #G0798), 500 nM GSK219 (Sigma-Aldrich, #SML0694) as indicated. Procedures for solution application were as employed previously (Le et al., 2019 (link); Liang and Yang, 2021 (link)). Briefly, a perfusion manifold with 100–200 μm tip was packed with eight PE10 tubes. Each tube was under separate valve control (ALA-VM8, ALA Scientific Instruments), and solution was applied from only one PE10 tube at a time onto the excised patches or whole-cell clamped cells. All experiments were at room temperature (22–25°C). All the other chemicals for solution preparation were obtained from Sigma-Aldrich.
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6

Electrophysiological Characterization of TMEM16F

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TMEM16F currents were recorded in whole-cell configuration using an Axopatch 200B amplifier (Molecular Devices) and the pClamp software package (Molecular Devices). Glass pipettes were pulled from borosilicate capillaries (Sutter Instruments) and fire-polished using a microforge (Narishge) to reach a resistance of 2–3 MΩ. The pipette solution (internal) contained (in mM) 140 CsCl, 1 MgCl2, and 10 HEPES, plus 1 CaCl2 to avoid the long-delay activation of TMEM16F(Liang and Yang, 2021 ; Zhang et al., 2022 (link)). The bath solution contained 140 CsCl, 10 HEPES, and 5 EGTA. Adjusted to pH 7.3 for both sides with CsOH. Currents were recorded about 2 minutes after whole-cell formation to ensure the activation of TMEM16F(Liang and Yang, 2021 ; Zhang et al., 2022 (link)).
Currents were normalized to cell capacitance as current density. I-V curves were constructed from steady-state currents after depolarization. Individual I-V curves were fitted with a Boltzmann function,
I(V)=Imax1+e-Z(V-V0.5)RT
where Imax denotes the maximal current, V0.5 denotes the voltage of half-maximal activation of conductance, z denotes the net charge moved across the membrane during the transition from the closed to the open state, and F denotes the Faraday constant.
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7

Whole-cell patch-clamp electrophysiology protocol

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Electrodes were pulled from glass capillaries with filament (Sutter Instruments) with a P-97 pipette puller (Sutter Instruments) to resistances of 4-7 MΩ. Electrodes were filled with a K-gluconate internal solution (pH 7.25; 285 mOsmol/L, composition in mM: 125 potassium gluconate, 10 KCl, 5 NaCl, 1 EGTA, 10 HEPES, 2 ATP sodium salt, 0.3 GTP sodium salt). EGTA (tetraacid form) was prepared as a stock solution in 1 M KOH before addition to the internal solution. Voltage steps were corrected for the calculated liquid junction (pClamp software package, Molecular Devices) between IB and the K-gluconate internal. 15 (link) Electrodes were position with an MP-225 micromanipulator (Sutter Instruments) to obtain a gigaseal prior to breaking into the whole cell configuration. Recordings were sampled at a rate of > 10 kHz using an Axopatch 200B amplifier, filtered with a 5 kHz low-pass Bessel filter, and digitized with a DigiData 1440A (Molecular Devices). Only recordings that maintained a 30:1 ratio of membrane resistance Rm to access resistance Ra were used for analysis. Pipette capacitance was corrected with the fast magnitude knob only; series resistance compensation was not performed. Voltage steps of -80, -40, 0, and +40 mV were applied in random order, followed by a voltage step to +80 mV.
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